Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029772_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:86352944:86355418:1 gene:Zm00001d029772 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ca2+/calmodulin-dependent protein kinase phosphatase

Sequence

ATGAGCGGAGGGGTGGAGCCGGATACCCCGCCCGGTAGCAGCAGCAGCAGCAGCAGGAGC
GGGGGCAGCACGCCCGTGGGCGGCAAGCCGCCACGCCACCACCTCACGTCCATCCGCCAC
TGCGCCAGCAGTGCCCGCATCGCCGCTGCCTCCGCCGAATTCGGGCTGGAGTCGGGGACG
CTCAGCTTGATTTCACCTACCGCAGACATCCGTCCGGGCTTCTTGCCTGTGTTCAGGTCG
GGGAGTTTCGCGGATATTGGACCCAAATCCTTCATGGAGGACGAGCATGTCTGTGTGGAC
AACCTCGTCGAGCACCTTGGACTCCGTGGCCCGGGCATCCCTGCACCGGGTGCCTTCTAT
GGGGTGTTTGATGGCCATGGTGGTAGTGATGCTGCCTGTTTTGTCCGGAAGAATATACTG
AAGTTCATAACCGAAGATTGCCACTTCCCCAACAGCATCGAGAAGGCAATCAGAAGTGCT
TTCGTAAAGGCTGACCATGCGATTGCGGATTCTCAGTCTCTTGACCGGAATTCTGGGACC
ACGGCGTTGACGGTCCTTATATCTGGCAGGACACTGCTTGTCGCGAATGCTGGTGACTGT
AGAGCCGTATTAGGAAAGCGAGGCCGAGCTTTTGAACTCTCGAGAGACCACAAACCCAGC
TGCAGCGTTGAGAAGCTCAGAATCGAAAACCTTGGCGGTACGGTCTTCGATGGCTACCTC
AACGGTCAGCTGGCTGTAGCAAGGGCGATCGGTGACTGGCACATGAAAGGCTCCAAAGGC
TCTGCGTGCCCTCTCACACCGGAACCTGAGTTTAGGGAGGTTAGGCTTACCGAGGAAGAC
GAGTTCTTGATAATAGGCTGCGATGGCCTCTGGGACGTGATGAGCAGCCAGTTTGCTGTC
TCCATGGTCAGGAAAGAGCTGATGGAACACAATGACCCACAGCGGTGCTCGCGGGAGCTT
GTCCAGGAAGCTCTTAGGCGCGACTGCTGTGATAACCTAACCGTAGTCGTCGTGTGCTTC
TCAGATGACCCGCCCCCTCAGATCGAGGTCCCGAGATTCCGGGTACGGAGAAGCATCTCA
ATGGAAGGGCTGCATACGCTGAGGGGAGCTCTTGACAGTAACGTTTGA

Peptide Sequence

PEP ID

Zm00001d029772_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:86352944:86355418:1 gene:Zm00001d029772 transcript:Zm00001d029772_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ca2+/calmodulin-dependent protein kinase phosphatase

Sequence

MSGGVEPDTPPGSSSSSSRSGGSTPVGGKPPRHHLTSIRHCASSARIAAASAEFGLESGT
LSLISPTADIRPGFLPVFRSGSFADIGPKSFMEDEHVCVDNLVEHLGLRGPGIPAPGAFY
GVFDGHGGSDAACFVRKNILKFITEDCHFPNSIEKAIRSAFVKADHAIADSQSLDRNSGT
TALTVLISGRTLLVANAGDCRAVLGKRGRAFELSRDHKPSCSVEKLRIENLGGTVFDGYL
NGQLAVARAIGDWHMKGSKGSACPLTPEPEFREVRLTEEDEFLIIGCDGLWDVMSSQFAV
SMVRKELMEHNDPQRCSRELVQEALRRDCCDNLTVVVVCFSDDPPPQIEVPRFRVRRSIS
MEGLHTLRGALDSNV

Transcript Sequence

Transcript ID

Zm00001d029772_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:86352944:86355418:1 gene:Zm00001d029772 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ca2+/calmodulin-dependent protein kinase phosphatase

Sequence

GAGTAACGGAGAGACGGAGCCATGAGCGGAGGGGTGGAGCCGGATACCCCGCCCGGTAGC
AGCAGCAGCAGCAGCAGGAGCGGGGGCAGCACGCCCGTGGGCGGCAAGCCGCCACGCCAC
CACCTCACGTCCATCCGCCACTGCGCCAGCAGTGCCCGCATCGCCGCTGCCTCCGCCGAA
TTCGGGCTGGAGTCGGGGACGCTCAGCTTGATTTCACCTACCGCAGACATCCGTCCGGGC
TTCTTGCCTGTGTTCAGGTCGGGGAGTTTCGCGGATATTGGACCCAAATCCTTCATGGAG
GACGAGCATGTCTGTGTGGACAACCTCGTCGAGCACCTTGGACTCCGTGGCCCGGGCATC
CCTGCACCGGGTGCCTTCTATGGGGTGTTTGATGGCCATGGTGGTAGTGATGCTGCCTGT
TTTGTCCGGAAGAATATACTGAAGTTCATAACCGAAGATTGCCACTTCCCCAACAGCATC
GAGAAGGCAATCAGAAGTGCTTTCGTAAAGGCTGACCATGCGATTGCGGATTCTCAGTCT
CTTGACCGGAATTCTGGGACCACGGCGTTGACGGTCCTTATATCTGGCAGGACACTGCTT
GTCGCGAATGCTGGTGACTGTAGAGCCGTATTAGGAAAGCGAGGCCGAGCTTTTGAACTC
TCGAGAGACCACAAACCCAGCTGCAGCGTTGAGAAGCTCAGAATCGAAAACCTTGGCGGT
ACGGTCTTCGATGGCTACCTCAACGGTCAGCTGGCTGTAGCAAGGGCGATCGGTGACTGG
CACATGAAAGGCTCCAAAGGCTCTGCGTGCCCTCTCACACCGGAACCTGAGTTTAGGGAG
GTTAGGCTTACCGAGGAAGACGAGTTCTTGATAATAGGCTGCGATGGCCTCTGGGACGTG
ATGAGCAGCCAGTTTGCTGTCTCCATGGTCAGGAAAGAGCTGATGGAACACAATGACCCA
CAGCGGTGCTCGCGGGAGCTTGTCCAGGAAGCTCTTAGGCGCGACTGCTGTGATAACCTA
ACCGTAGTCGTCGTGTGCTTCTCAGATGACCCGCCCCCTCAGATCGAGGTCCCGAGATTC
CGGGTACGGAGAAGCATCTCAATGGAAGGGCTGCATACGCTGAGGGGAGCTCTTGACAGT
AACGTTTGAGCTCCGAAAGTGTACCTTCGCCTGCAACTTGTGTCGTGTTTGGTCTGTTGG
AAGTTTTGCTCCGCTCGGCTCATCGGTGTTTTGCGATATAGATCTCGGAATAAGTTTTGT
AGAATTATTTTGGAAGGAAATTTTTGTTGAGGTGTAGGCTAATTAATCTTCCTTTGTTGA
GGCCACCATTTTGTTGTTGGTTGCTCACAATGTAATCGAGCAATTAACCGGCACGTTGTT
CTGGTACGAATGAGAGTTATAGCAGCTGATCGTTTTT