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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029753_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:85506043:85509564:1 gene:Zm00001d029753 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tobamovirus multiplication protein 3
Sequence

ATGAGGGGGTTGCTGGCGGTGGAGGCCGCGGGCGCGGCGTCGGTCCCGGCCTCGGTACTC
CACGGCGCCGTGGACTGGTGGCGCGACGTCAACGAGTCGCCGCTGTGGCAGGACCGCATA
TTTCACGCGCTCGCCGTGCTCTACGGCATCGTCTCGGCCGTCGCGCTGGTCCAATTAATC
AGAATCGAGTGTAGGGTGCCAGAGTATGGATGGACAACGCAGAAGGTGTTCCATTTTCTA
AACTTCCTTGTGAACGGCGTGCGGTCTGTCGTGTTTGTGCTGCGGCGAAATGTGCAACTT
GTAGAGCCTGAGATAATACAACATGTGCTTCTGGATATGCCCGGGCTTGCATTCTTCACG
ACATATGCACTTTTAGTGCTCTTCTGGGCTGAGATTTATTATCAGGCACGTGCAATGTCG
ACTGATGGGCTTAGACCAACTTTCTATTGGATCAACGGTGTGGTCTATGCAATTCAGATA
ATTCTATGGTTGGTTTTATGGTGGAAACCAGTTCGAGTTATGGTCATTTTGCCAAAGATG
TTCTTTGCAGGTGTATCACTATTTGCTGCCCTTGGATTTGTTCTGTATGGAGGAAGGTTA
TTTCTGATGTTGCAGCGTTTTCCTGTAGATTCGAAAGGAAGGAGAAAGAAATTGCAGGAG
GTTGGCTATGTGACTACCATCTGTTTTTCTTGTTTCTTGATCAGATGTGTCATGCTGTGC
CTCAATTCATTTGATAAAGAAGCAGATCTTGATGTCCTGAACCATCCAATCCTGAACTTC
CTCTATTACCTGCTGGTTGAGATAGTGCCTTCGGCTCTGGTGCTCTTCATTCTACGGAAA
CTGCCTCCAAAACGTGGGATCACACAATATCACCCAATCCATTAG

Peptide Sequence

PEP ID

Zm00001d029753_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:85506043:85509564:1 gene:Zm00001d029753 transcript:Zm00001d029753_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tobamovirus multiplication protein 3
Sequence

MRGLLAVEAAGAASVPASVLHGAVDWWRDVNESPLWQDRIFHALAVLYGIVSAVALVQLI
RIECRVPEYGWTTQKVFHFLNFLVNGVRSVVFVLRRNVQLVEPEIIQHVLLDMPGLAFFT
TYALLVLFWAEIYYQARAMSTDGLRPTFYWINGVVYAIQIILWLVLWWKPVRVMVILPKM
FFAGVSLFAALGFVLYGGRLFLMLQRFPVDSKGRRKKLQEVGYVTTICFSCFLIRCVMLC
LNSFDKEADLDVLNHPILNFLYYLLVEIVPSALVLFILRKLPPKRGITQYHPIH

Transcript Sequence

Transcript ID

Zm00001d029753_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:85506043:85509564:1 gene:Zm00001d029753 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tobamovirus multiplication protein 3
Sequence

AAATCCTAACCTTCTCTCCTTCCTTTTGATCTTCCCCTCTACGCGATCGAAACCGAAGCT
CGAATCAATCCTCCACCCGTTTCCAGCCCCTCGTCCCGGAGCCCCGATCCGCCTCCCGTC
TCCTCCTGGGCAGGTCCCCCTTTTCCGCGTGTGCGTTGGCCGGCCGGTTCCCGATGAGGG
GGTTGCTGGCGGTGGAGGCCGCGGGCGCGGCGTCGGTCCCGGCCTCGGTACTCCACGGCG
CCGTGGACTGGTGGCGCGACGTCAACGAGTCGCCGCTGTGGCAGGACCGCATATTTCACG
CGCTCGCCGTGCTCTACGGCATCGTCTCGGCCGTCGCGCTGGTCCAATTAATCAGAATCG
AGTGTAGGGTGCCAGAGTATGGATGGACAACGCAGAAGGTGTTCCATTTTCTAAACTTCC
TTGTGAACGGCGTGCGGTCTGTCGTGTTTGTGCTGCGGCGAAATGTGCAACTTGTAGAGC
CTGAGATAATACAACATGTGCTTCTGGATATGCCCGGGCTTGCATTCTTCACGACATATG
CACTTTTAGTGCTCTTCTGGGCTGAGATTTATTATCAGGCACGTGCAATGTCGACTGATG
GGCTTAGACCAACTTTCTATTGGATCAACGGTGTGGTCTATGCAATTCAGATAATTCTAT
GGTTGGTTTTATGGTGGAAACCAGTTCGAGTTATGGTCATTTTGCCAAAGATGTTCTTTG
CAGGTGTATCACTATTTGCTGCCCTTGGATTTGTTCTGTATGGAGGAAGGTTATTTCTGA
TGTTGCAGCGTTTTCCTGTAGATTCGAAAGGAAGGAGAAAGAAATTGCAGGAGGTTGGCT
ATGTGACTACCATCTGTTTTTCTTGTTTCTTGATCAGATGTGTCATGCTGTGCCTCAATT
CATTTGATAAAGAAGCAGATCTTGATGTCCTGAACCATCCAATCCTGAACTTCCTCTATT
ACCTGCTGGTTGAGATAGTGCCTTCGGCTCTGGTGCTCTTCATTCTACGGAAACTGCCTC
CAAAACGTGGGATCACACAATATCACCCAATCCATTAGAGAGCAGGCCTTGGTGGACAGG
CAAATGTTTTCTGGTGGATTGTCTTATATAGCGTGGTAAATACAGAAGGCAGAGTGAAAA
GTACCACCTTTGCTCTCGAGCTTGCCCAGCTTTTCATACGAGGGAAGGCTTTAGAATCTC
AGGTTTAGAAAATGCGATCTCTTTCTCTCAGATTTAGAAAATGTAAAATGTAATTTATAT
AACTTTAATATTCTCAGTGCATATCATTTGTTCACATCTCAGT