Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029683_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:82567028:82569436:1 gene:Zm00001d029683 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:irregular pollen exine1 description: irregular pollen exine1
Sequence	ATGGCGCCTGGGCTTGCGAACTGGGTCGCGCTGGTTCTGACCGTCCTCCTTGGTCTCTCG TGCCTCGTCGTCGCGCTCTCGGAGGATGGTTTGTGCCGGACTTGTCACGCGCTCTTTGGT ATTTCTGCAGTTCTGCAAACGTGTGAATTGGCATGGACATGTGCAGAAACACTGGACAAG CTGCGGTTCGTGCGCCACGCACAGGACGCGCCCCTGGTGTCGCAGTACAACTACATCGTG ATCGGCGGCGGCACGGCGGGGTGCCCGCTGGCGGCGACGCTGTCGGAGCACTCGCGCGTG CTGCTCCTGGAGCGCGGGGGCCTCCCGTCCCGCAACATGTCCGACCAGCAGCACTTCACG GACGCGCTGGCGGACACGTCCCCGGCGTCGCCCGCGCAGCGGTTCGTGTCCGAGGACGGC GTGGTGAACGCGCGGGCCCGGGTGCTGGGCGGGGGCAGCTGCCTCAACGCCGGGTTCTAC ACGCGGGCCAGCACCGACTACGTGCGCGCCGCCGGCTGGGACGCCCGCCTCGTCAACTCG TCCTACCGCTGGGTGGAGCGCGCGCTCGTGTTCCGCCCCGCCGTGCCCCCGTGGCAGGCC GCGCTCCGCGACGCGCTGCTCGAGGCCGGCGTCACGCCCGACAACGGCTTCACCTTCGAC CACGTCACGGGCACCAAGATCGGGGGCACCATCTTCGACAGCAGCGGCCAGCGCCACACC GCCGCCGACTTCCTCCGCCACGCGCGCCCCAGGGGGCTCACCGTGTTCCTCTACGCTACC GTCTCCAGGATCCTCTTCAGACAGCAAGAGGGCGTGCCGTACCCGGTGGCGTACGGTGTG GTGTTCACGGACCCGCTCGGGGTGCAGCACCGGGTGTACCTCCGGGACGGCGCCAAGAAC GAGGTGATCCTGTCGGCGGGGACGCTGGGGAGCCCGCAGCTGCTGATGCTGAGCGGCGTC GGCCCGCAGGCGCACCTGGAGGCGCACGGCGTCCAGGTGCTGGTGGACCAGCCCATGGTC GGGCAGGGCGTGGCTGACAACCCGATGAACTCGGTGTTCATCCCGTCGCCGGTGCCCGTC ACGCTGTCGCTCGTGCAGGTCGTCGGGATCACCCGGTCCGGCAGCTTCATCGAGGGCGTG AGCGGCTCCGAGTTCGGCATCCCCGTCTCCGAGGGCGCCCGTCGCCTGGCTCGCAGCTTC GGCCTCTTCTCTCCGCAGACGGGGCAGCTGGGCACGTTGCCGCCGAAGCAGAGAACCCCA GAGGCCCTGGAGCGCGCGGCGGAGGCGATGCGGCGGCTGGACAGGCGGGCGTTCCGGGGC GGATTCATCCTGGAGAAGATCCTGGGCCCCGTCTCCTCGGGCCACGTCGAGCTGCGGTCC GCCGACCCGCGCGCGAACCCGGCGGTGACGTTCAACTACTTCCAGGAGTCGGAGGACCTG CAGCGGTGCGTGCGCGGCATCCAGACGATCGAGCGCGTGATCCAGTCCCGGGCCTTCGCC AACTTCACCTACGCCAACGCTTCCACGGAGTCCATCTTCACCGACTCCGCCAACTTCCCC GTCAACCTCCTGCCGCGGCACGTCAACGACTCCCGGACGCCCGAGCAGTACTGCAGGGAC ACCGTCATGACCATCTGGCATTACCACGGCGGGTGCCAGGTCGGCGCCGTCGTGGACGAC GATTACCGGGTGTTCGGCGTGCAGCGACTGAGGGTGATCGACAGCTCCACGTTCAAGTAC TCCCCCGGCACCAACCCGCAGGCCACCGTCATGATGCTCGGAAGGTATATGGGTGTGAAA ATTCAGGCCGAGAGATGGAGGAAATGA

Peptide Sequence

PEP ID	Zm00001d029683_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:82567028:82569436:1 gene:Zm00001d029683 transcript:Zm00001d029683_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:irregular pollen exine1 description: irregular pollen exine1
Sequence	MAPGLANWVALVLTVLLGLSCLVVALSEDGLCRTCHALFGISAVLQTCELAWTCAETLDK LRFVRHAQDAPLVSQYNYIVIGGGTAGCPLAATLSEHSRVLLLERGGLPSRNMSDQQHFT DALADTSPASPAQRFVSEDGVVNARARVLGGGSCLNAGFYTRASTDYVRAAGWDARLVNS SYRWVERALVFRPAVPPWQAALRDALLEAGVTPDNGFTFDHVTGTKIGGTIFDSSGQRHT AADFLRHARPRGLTVFLYATVSRILFRQQEGVPYPVAYGVVFTDPLGVQHRVYLRDGAKN EVILSAGTLGSPQLLMLSGVGPQAHLEAHGVQVLVDQPMVGQGVADNPMNSVFIPSPVPV TLSLVQVVGITRSGSFIEGVSGSEFGIPVSEGARRLARSFGLFSPQTGQLGTLPPKQRTP EALERAAEAMRRLDRRAFRGGFILEKILGPVSSGHVELRSADPRANPAVTFNYFQESEDL QRCVRGIQTIERVIQSRAFANFTYANASTESIFTDSANFPVNLLPRHVNDSRTPEQYCRD TVMTIWHYHGGCQVGAVVDDDYRVFGVQRLRVIDSSTFKYSPGTNPQATVMMLGRYMGVK IQAERWRK

Transcript Sequence

Transcript ID	Zm00001d029683_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:82567028:82569436:1 gene:Zm00001d029683 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:irregular pollen exine1 description: irregular pollen exine1
Sequence	CATATATGACCTTTATACAATTATCACCACCTCGATTCCTCGCGGCACATCTTTGCACCG CAGAACGACCGTGCAGTATTTTATACAAACATCTACTCTCGATCTACCCATGAGCTAACT CCCAATATATAAGCGAGCCGAACTTTTCTCCTATCTGAGCACTGCTGCTGCTGAAAATGG CGCCTGGGCTTGCGAACTGGGTCGCGCTGGTTCTGACCGTCCTCCTTGGTCTCTCGTGCC TCGTCGTCGCGCTCTCGGAGGATGGTTTGTGCCGGACTTGTCACGCGCTCTTTGGTATTT CTGCAGTTCTGCAAACGTGTGAATTGGCATGGACATGTGCAGAAACACTGGACAAGCTGC GGTTCGTGCGCCACGCACAGGACGCGCCCCTGGTGTCGCAGTACAACTACATCGTGATCG GCGGCGGCACGGCGGGGTGCCCGCTGGCGGCGACGCTGTCGGAGCACTCGCGCGTGCTGC TCCTGGAGCGCGGGGGCCTCCCGTCCCGCAACATGTCCGACCAGCAGCACTTCACGGACG CGCTGGCGGACACGTCCCCGGCGTCGCCCGCGCAGCGGTTCGTGTCCGAGGACGGCGTGG TGAACGCGCGGGCCCGGGTGCTGGGCGGGGGCAGCTGCCTCAACGCCGGGTTCTACACGC GGGCCAGCACCGACTACGTGCGCGCCGCCGGCTGGGACGCCCGCCTCGTCAACTCGTCCT ACCGCTGGGTGGAGCGCGCGCTCGTGTTCCGCCCCGCCGTGCCCCCGTGGCAGGCCGCGC TCCGCGACGCGCTGCTCGAGGCCGGCGTCACGCCCGACAACGGCTTCACCTTCGACCACG TCACGGGCACCAAGATCGGGGGCACCATCTTCGACAGCAGCGGCCAGCGCCACACCGCCG CCGACTTCCTCCGCCACGCGCGCCCCAGGGGGCTCACCGTGTTCCTCTACGCTACCGTCT CCAGGATCCTCTTCAGACAGCAAGAGGGCGTGCCGTACCCGGTGGCGTACGGTGTGGTGT TCACGGACCCGCTCGGGGTGCAGCACCGGGTGTACCTCCGGGACGGCGCCAAGAACGAGG TGATCCTGTCGGCGGGGACGCTGGGGAGCCCGCAGCTGCTGATGCTGAGCGGCGTCGGCC CGCAGGCGCACCTGGAGGCGCACGGCGTCCAGGTGCTGGTGGACCAGCCCATGGTCGGGC AGGGCGTGGCTGACAACCCGATGAACTCGGTGTTCATCCCGTCGCCGGTGCCCGTCACGC TGTCGCTCGTGCAGGTCGTCGGGATCACCCGGTCCGGCAGCTTCATCGAGGGCGTGAGCG GCTCCGAGTTCGGCATCCCCGTCTCCGAGGGCGCCCGTCGCCTGGCTCGCAGCTTCGGCC TCTTCTCTCCGCAGACGGGGCAGCTGGGCACGTTGCCGCCGAAGCAGAGAACCCCAGAGG CCCTGGAGCGCGCGGCGGAGGCGATGCGGCGGCTGGACAGGCGGGCGTTCCGGGGCGGAT TCATCCTGGAGAAGATCCTGGGCCCCGTCTCCTCGGGCCACGTCGAGCTGCGGTCCGCCG ACCCGCGCGCGAACCCGGCGGTGACGTTCAACTACTTCCAGGAGTCGGAGGACCTGCAGC GGTGCGTGCGCGGCATCCAGACGATCGAGCGCGTGATCCAGTCCCGGGCCTTCGCCAACT TCACCTACGCCAACGCTTCCACGGAGTCCATCTTCACCGACTCCGCCAACTTCCCCGTCA ACCTCCTGCCGCGGCACGTCAACGACTCCCGGACGCCCGAGCAGTACTGCAGGGACACCG TCATGACCATCTGGCATTACCACGGCGGGTGCCAGGTCGGCGCCGTCGTGGACGACGATT ACCGGGTGTTCGGCGTGCAGCGACTGAGGGTGATCGACAGCTCCACGTTCAAGTACTCCC CCGGCACCAACCCGCAGGCCACCGTCATGATGCTCGGAAGGTATATGGGTGTGAAAATTC AGGCCGAGAGATGGAGGAAATGATCGAGATTTCAAGTTTCAGCATGGTCTAGGGACTAGG CCTCTAGCTGTGATAATGAATATCAATCAACACATCTGTAACTGGGTAACTGCTCTAGCC TCTAGAGTAGGTTTTATTTTTCTCTAGATATTTTTTTAATCTCCTCTAGACATACTCCTA GCTTCCGCATGTTGTTGGTTCCATTTCACCACACCCCTAGATGCATTGTTCAGCATTTCG CGGGAATAATGAGAATTATGCTGAAAAGGCATGATCGCTCCTCCTGCCTATTCTACAGAA AATTAAATAAAGAACCGCCATTTCATCAAATAAA