Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029664_T021
CDS Infomation	cds chromosome:B73_RefGen_v4:1:81803797:81807649:-1 gene:Zm00001d029664 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase theta
Sequence	ATGTCTCCCGTTCACAAAAAAGAAGGACATGAGAAGTGGGGTGGTGACTCTGGCTCCAAA AGACCAAAGTTTGAGCAGGATGGAGCAGGAGATATTGTTATGGAGCCACACTTAACCGAG GATAAACCTGTGCGGATAGACCAAGAATCATCGTCAACATCTAATAGGGATGCTGAGGCA AGCACATCTACTAGCATGAAACCTGTTAAAACTGAAGAAGCAGGAGCAGATCTTCTTCCC AAAGAGATGAATATTATGACAATTAGCGACGATAAAGCTGATGGCCATAATGATAAGGAA GGTGAGGGTGTTACACTTGATGGGACTGGAACAGAGACAGGGCAGATAATTGTGACAACA ATAGGAGGTCACAATGGGAAGCCAAAGCAGAAGGTCTCATACATGGCAGAATTGGTTGTT GGTACTGGTTCGTTTGGTATTGTTTTCCAGGCGAAATGCTTGGAAACTGACGAGACGGTG GCGATAAAAAAGGTGTTACAAGATAAGCGCTACAAGAATAGAGAGCTCCAGACTATGCAG TTACATGACCACCCGAATGTAGTTCAGCTGAAGCATCACTTCTTTTCAACAACTCAAAAG GGAGAAGTTTACCTCAACCTTGTACTTGAATTTGTATCCGAGACAGTTTATCGTGTTGCC AAATACTACAACCGGATGAACCAGCGTGTACCCATAATATATGTTAAGTTGTATGCATAT CAGATGTGCCGTGCGCTTGCTTACATCCATCGAGTTGTCGGTGTGTGTCATCGTGATATT AAACCTCAAAATCTACTGGTCAATCCTCATACACATCAACTTAAGATTTGTGATTTTGGG AGCGCTAAAAAATTGGTCCCTGGTGAGCCTAACATATCGTACATTTGCTCGCGGTATTAT AGGGCTCCTGAACTAATATTTGGAGCTACGGAGTATACCACTGCGATCGATATCTGGTCT GTTGGCTGTGTAGTGGCTGAGCTTCTGATTGGTCAGCCTTTGTTTCCTGGTGAAAGTGGT GTTGACCAACTGGTGGAAATAATAAAGATTTTGGGTACTCCAACAAGAGAGGAGATCAGG TGCATGAATCCAAATTATTCCGAATTCAAGTTCCCTCAGATAAAAGCCCATCCATGGCAC AAGCTTTTTGGTAAGCGCATGCCACCCGAGGCTGTCGATCTCGTGTCAAGGCTGCTCCAG TACTCACCGAACCTGCGCTGCACTGCTGTCGACGCCTGTGCCCATCCGTTCTTCGATGAG CTGCGGGACCCCAAGGCTTGCCTGCCGAACGGACGGCCAATGCCA

Peptide Sequence

PEP ID	Zm00001d029664_P021
PEP Infomation	pep chromosome:B73_RefGen_v4:1:81803797:81807649:-1 gene:Zm00001d029664 transcript:Zm00001d029664_T021 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase theta
Sequence	MSPVHKKEGHEKWGGDSGSKRPKFEQDGAGDIVMEPHLTEDKPVRIDQESSSTSNRDAEA STSTSMKPVKTEEAGADLLPKEMNIMTISDDKADGHNDKEGEGVTLDGTGTETGQIIVTT IGGHNGKPKQKVSYMAELVVGTGSFGIVFQAKCLETDETVAIKKVLQDKRYKNRELQTMQ LHDHPNVVQLKHHFFSTTQKGEVYLNLVLEFVSETVYRVAKYYNRMNQRVPIIYVKLYAY QMCRALAYIHRVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKKLVPGEPNISYICSRYY RAPELIFGATEYTTAIDIWSVGCVVAELLIGQPLFPGESGVDQLVEIIKILGTPTREEIR CMNPNYSEFKFPQIKAHPWHKLFGKRMPPEAVDLVSRLLQYSPNLRCTAVDACAHPFFDE LRDPKACLPNGRPMP

Transcript Sequence

Transcript ID	Zm00001d029664_T021
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:81803797:81807649:-1 gene:Zm00001d029664 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase theta
Sequence	AAAGCTAAAAAAAGCACCGAGAAATCTAGTGGTGCAGCGAGCGAATCCGTCCGGCCGTCC CCTTCCTCCGCCACCCATCCCCAAAATTTTCACCGCACGTCGCCTCCCCGCGACGACGAC GCCCGAAGCTTCCAGGGCCCTCCCCTCCCCCCCGCGGCCGCCCCTCCCTAGATCGCCGCC TCCGGCAGCGGCGAGGCTGCATCGCGAGGGCGGCGGAGGAGCCGGGCGACGGGGTCGACG AAGGCGGGGAAGACGAGGCTAGGGTTCGGGGTCGCTGCTGCTGGGCTGCGTCTGAGGGAG GAGGATGCATATGATGCGGCGGCTCAAGAGCATCGCCTCCGGCCGCTCGTCGGTCTCCGA TCCGTAAAGGATAATATCAGGTTCTAATCAGTCCATTGGTTCAAAAAATTTGTTCATTCG GGAAGGATTTTAACCTGTAGGTTAATCAGGAAATGTCTCCCGTTCACAAAAAAGAAGGAC ATGAGAAGTGGGGTGGTGACTCTGGCTCCAAAAGACCAAAGTTTGAGCAGGATGGAGCAG GAGATATTGTTATGGAGCCACACTTAACCGAGGATAAACCTGTGCGGATAGACCAAGAAT CATCGTCAACATCTAATAGGGATGCTGAGGCAAGCACATCTACTAGCATGAAACCTGTTA AAACTGAAGAAGCAGGAGCAGATCTTCTTCCCAAAGAGATGAATATTATGACAATTAGCG ACGATAAAGCTGATGGCCATAATGATAAGGAAGGTGAGGGTGTTACACTTGATGGGACTG GAACAGAGACAGGGCAGATAATTGTGACAACAATAGGAGGTCACAATGGGAAGCCAAAGC AGAAGGTCTCATACATGGCAGAATTGGTTGTTGGTACTGGTTCGTTTGGTATTGTTTTCC AGGCGAAATGCTTGGAAACTGACGAGACGGTGGCGATAAAAAAGGTGTTACAAGATAAGC GCTACAAGAATAGAGAGCTCCAGACTATGCAGTTACATGACCACCCGAATGTAGTTCAGC TGAAGCATCACTTCTTTTCAACAACTCAAAAGGGAGAAGTTTACCTCAACCTTGTACTTG AATTTGTATCCGAGACAGTTTATCGTGTTGCCAAATACTACAACCGGATGAACCAGCGTG TACCCATAATATATGTTAAGTTGTATGCATATCAGATGTGCCGTGCGCTTGCTTACATCC ATCGAGTTGTCGGTGTGTGTCATCGTGATATTAAACCTCAAAATCTACTGGTCAATCCTC ATACACATCAACTTAAGATTTGTGATTTTGGGAGCGCTAAAAAATTGGTCCCTGGTGAGC CTAACATATCGTACATTTGCTCGCGGTATTATAGGGCTCCTGAACTAATATTTGGAGCTA CGGAGTATACCACTGCGATCGATATCTGGTCTGTTGGCTGTGTAGTGGCTGAGCTTCTGA TTGGTCAGCCTTTGTTTCCTGGTGAAAGTGGTGTTGACCAACTGGTGGAAATAATAAAGA TTTTGGGTACTCCAACAAGAGAGGAGATCAGGTGCATGAATCCAAATTATTCCGAATTCA AGTTCCCTCAGATAAAAGCCCATCCATGGCACAAGCTTTTTGGTAAGCGCATGCCACCCG AGGCTGTCGATCTCGTGTCAAGGCTGCTCCAGTACTCACCGAACCTGCGCTGCACTGCTG TCGACGCCTGTGCCCATCCGTTCTTCGATGAGCTGCGGGACCCCAAGGCTTGCCTGCCGA ACGGACGGCCAATGCCA