Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029608_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:1:79094921:79117959:-1 gene:Zm00001d029608 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mechanosensitive ion channel protein 3 chloroplastic
Sequence	ATGGCAGTTGGATTGACATCTCAGCTGTTCCAAAGAGTAACTGCTACTGACATCTTTTGC CAAAGGAACAAATTTAGGAGTTCTGAGATGAGGAGTTCTCTTCCCTTGCCATCCACCTCG TTTCCTTCAGTTGCTGATAGGCGAGACTGTTGGGGTCGCAATGTGTTAGAGAGTAGCTGC ATGCCCATGCTTTATACACCTCGCAGATATAGATCTTTGGGCTTTAGATCTTTTGCCTTG CCAATTCCTTTGAAGGAAATTCCTCTTGTCAAGAACACATCATTAGCACTAACTAGGTCA TGTGATGCTTTACTTGCAAATCCTGCTACCTCACTTGTGGTCCCTGCAATCGGGATTATT GTGTTTGCTCTGTGGGGTTTTTTGCCTCTAATGCGGGATATTAGAAACCGTTTTGATCAT GGAGGCAACTGGAAGAAGAGTCCTACATATTTGATTTCTTCGTCGTACCTTCAACCTCTA CTTCTCTGGACAGGAGCAACACTAATCTGCAGGGGTTTGGATCCAGTTGTCTTGCCTTCA GCAGCAAGTCAAGCTGTGAAAACACGTCTGATAACTTTTGTGAGATCATTATCAACTGTC CTGGCTGTTGCATATATTCTCACAAGCTTGATTCAGCAGGTACAAAAGTTTCTTATGGAC ATGCGCAATCCCAATGATACAAGAAATATGGGGTTTGATTTTACCATGAAAGCTCTTTAT ACTGGTGTTTGGATTGCTTCTGTTTCTCTCTTTATGGAGTTGCTGGGTTTCAATACCCAG AAGTGGATAACTGCTGGAGGGTTTGGGACAGTGTTGCTTACACTTGCTGGTCGAGAGATT TTTACTAACTTCCTCTCAAGTGTCATGATCAATGCAACACGCCCATTTGTAGTCAATGAA TGGATCGATGCAAAGATAGATGGTGTTGATGTCTCTGGCATTGTTGAGCATGTTGGTTTG TGGTCTCCAACACTCATTAGAGGTGTTGATCGAGAAGCGATATACATTCCTAACCATAAG TTTACAGTTTCTATATTAAGGAATAACACTCAGAGGACCCATTGGCGTATTAAGACCTAT CTTGCTATTAGCCACATGGATGCTGGAAAAATTGGGACTATAGTTGCTGACATGAGGAAA GTTTTGGCAAAAAATCCGCATATAGAACAACAAAAGCTGCACAGGAGAGTATTCTTTGAG AAAATTGATCCAAAAAATCAAGCACTTATGATTTTCATATCCTGCTTTGTAAAGACATCA CATTTTGAGGAGTATCTCAATGTCCAGGAAGCTGTTATGTTGGACCTTCTTAGAATAGTT GGGCATCACAAAGCAAGGCTTGCTACCCAAATTCGAACAGTTCAGAAATCATATGGCAAT GCAGACTTCGATAACATTCCTTTTGGAGAGGACATGTATAGTCGAGTCCGTGGCCGGCCA CTTCTGATTGATACATCTGCAAGGATCAGTGATGACAAACCCAGGCCTCGACCTGTATCA TCACGTGAGGAGCAGAAAGTCAAGACAAATGGCTCGGTAGATATTAAGTCCAGTTCCCCT GAAAATGCTAGTTCAAGCAACTCTGAAAAGCAGGAACCGAAAAAAATGGTGCCTGAAGAT ACTCGGGTGAAGAACATTAAGGGTGATAATGTGATGCCAGTAACACCATCTTTAGATCCT GCTACGTCAACTTCCAAGGCTGGTAAAGGGAAGACACGGGAACCAGAGCCCACTGAGCGG CAAGGAGATGGGTCAGTCTCGGTGGCTAATCCAAAGAAAGAATCTAGACCAGTTTTTGAA GATAACATTGTTCTGGGCGTAGCCCTTGAGGGTTCCAGGAGGACACTGCCTATTGAAGAA GGAAATCCTCATCTATCACTATCTGAGACTGAGGTGGACACCGAAGAGGCGGCTTCATCA CCGAAGGATAAGATAGGCCAAAGCCCAAAACTTTGA

Peptide Sequence

PEP ID	Zm00001d029608_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:1:79094921:79117959:-1 gene:Zm00001d029608 transcript:Zm00001d029608_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mechanosensitive ion channel protein 3 chloroplastic
Sequence	MAVGLTSQLFQRVTATDIFCQRNKFRSSEMRSSLPLPSTSFPSVADRRDCWGRNVLESSC MPMLYTPRRYRSLGFRSFALPIPLKEIPLVKNTSLALTRSCDALLANPATSLVVPAIGII VFALWGFLPLMRDIRNRFDHGGNWKKSPTYLISSSYLQPLLLWTGATLICRGLDPVVLPS AASQAVKTRLITFVRSLSTVLAVAYILTSLIQQVQKFLMDMRNPNDTRNMGFDFTMKALY TGVWIASVSLFMELLGFNTQKWITAGGFGTVLLTLAGREIFTNFLSSVMINATRPFVVNE WIDAKIDGVDVSGIVEHVGLWSPTLIRGVDREAIYIPNHKFTVSILRNNTQRTHWRIKTY LAISHMDAGKIGTIVADMRKVLAKNPHIEQQKLHRRVFFEKIDPKNQALMIFISCFVKTS HFEEYLNVQEAVMLDLLRIVGHHKARLATQIRTVQKSYGNADFDNIPFGEDMYSRVRGRP LLIDTSARISDDKPRPRPVSSREEQKVKTNGSVDIKSSSPENASSSNSEKQEPKKMVPED TRVKNIKGDNVMPVTPSLDPATSTSKAGKGKTREPEPTERQGDGSVSVANPKKESRPVFE DNIVLGVALEGSRRTLPIEEGNPHLSLSETEVDTEEAASSPKDKIGQSPKL

Transcript Sequence

Transcript ID	Zm00001d029608_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:79094921:79117959:-1 gene:Zm00001d029608 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mechanosensitive ion channel protein 3 chloroplastic
Sequence	CCCTGAATCCTGATTTCTATTCACCTTCTTCCCCTCCTCCGGGCGGAAGGCAAAGACCTA CACGCCTATCCCTCTCCCTCCCGGGTCCCGGCTTCCCCTTCCCTGCTCCCCAGATCGATT CACCCAGCGGGAAAAGCGGCGCGCAGTGGGGTGCAGCAGGCGCAGCGGGCTCGGCGGGCG GCGAGCGGCTAGCGGCTAGCCGCGACGGGCGGCCAATCTACAGCGGAAGGCGGTGGGCGG CTACCGGTGGCACATCGACCTACGGAAAGTAGAAAGGTGGGGAGGACTGCCCTGTTCGCA TTTGGAGCATCAAAACAGGCGAGCTAATCTTTGCACGGAGCATGGCAGTCTGGTGTTTGC TCATGAGCCGTTTATTAGTCTATACTCTACTACTATGATATGTGTAGGTGTGGTAATGGA TCACGATTCATATGCTTCTTCACAATATATTTGGGCCCTTAATTAATTTTAGTTCAAAAA TGAATAGGAATAGAGCCCGATCCTAATCCGATTCGGTCCTTAAATTTTATAGTGTAAAAT CTAGAGCCCATTACCACCCCTAGACATGTGTGGAATGTATTACTCAGTATCCGACAAAAA TATTCGCTACCGATGTTATCCGTGTCCGACTAGTTCCGTATTCGACACACATCTATCCGT ATTTGCATCCGAGAATATTCGTATTTGTATTCGAATCCGAAGCTATATGTATTAGAATTC AAATCCGAAGAAAATACGAAAACAAATATGGTTTCAGCGATATCCGTCCGTATCCGATCT GATTACACCCATAATCCCTCTCCTGAATCTACCGATCCTCGGCCGCGTCGGGGCTCTAGG CGTCCTCGCTGTCACGTCCCCGCAGCGGCCGGTTACAGGACCACTCGCCGTCACCCTTCC TGATCCGCCGCTGCCGCCGCCGGTTTCTAGGTGAGGGGGTTCATCACACCTTTTGTTTTC TGCCGCCTCACGTACGTTTCAGCAGTTTTGGTGGCTAATCATCCGTGTAGATTTCACCTT GTGATTCATCCCGATATTGAACTTAGCGTGCGTAATCATAACCCAATCAGTTATGTATGA TGCCTGGTTGTGGTTGTTTTCCCTCACCCTTGGGAACCTGCGTTTGTAGTTAGTTCCGTC GGAGAACGGTGGCTGGTCAAGTATTATCCAATTTCAACCAGTGATTTTCCCTATGTTATC TATGCTGGCTCATTAGATTTGGTTGTGGATCCATTCATATTTCTCTTCCTATTTGTGGCT CACTGGCTTTGATGCCTCCGGAGAAATTTAGAGAGAAGATCAACACTATAACATCTATCG GGAGGCAAGTTTGTTCACCAAACTAGCAGTTCTGGTATTTGAACACAGCTAAAATCATAA AGTGCTGATTGTGAGGACCAATATGGCTTCAGATCAAATCATAATAATGCATTGTCTAGG TAGCCAAAGTTTTTCTATTCAGCGCGTTGGTTAAATATTCTGCAAGGATCTGTAGGAAAG AGCTGAAGCAAACTAAACATCAGCTAAATAATTAGGACAGCGTTTACCTTTTTTTATAGG TTAAATGAGCTTCAAAGAAGGGAACATACACACATCACTTATTTATATTGCCCCAAACAC TGCTATATTTTTAATTTTTTTCTTTGGAATTATCATACCTGATGAACTTAGGGTCTTATT TTCAAATGGCCAAGACTACCTATTGCCATTAAAATGGAACAATCATAGTGTCAGGGCCTA AGGAGGCCCACGGAGGGGCTGCGACAGCAGCAGCCATGGGCCCTCCAAGGGGGATTAGAT AAGGATAGTTAGAGATAAGATTAGAAGATTAGTTGAGATTATTTAGGAGATTAGTTGAGA TTATCTAGGAAGGTTATCAGTTAGTAGTTTGTTGAGAGTTTTTAGGAGAGTTTTAAGGAG ATAAGGATCAGTAGCTAGATAGGGGCGGCCAATCGGCCTATTTATGTAATCAATGGATGA GAAATAAAGCAAGCAAGAATTAGAAGGGAGAAACCATCCTCTTGCTCGGCCGTGGGCAGA GGCCCCCGGCCGGCGTTCCTGCCCATCGATACCCCTCTCTAATCCCTCATCGATCTAGCG ACCATAACATCTGGTATCGGCTAGCTTGGGTTTCGATCTGATCCAATGGCTTCTGCTGCC AATTTCGCAGCGTCATCCTGGCAACCGGCGTCCCCATCTCCATGGACCGCGCCACATGTC ACCTTCGTCACATCGTCCTGGCAACCAACGTCCCCATCTCCATGGGCTGCGTCGTATGCC ACCTTCGTCACGCCATCCTGGCAACCGGTGTCCCCATCTCCATGGGCAGCATCGCCTGCC AATTTTGTCACCACATCCTGGACGCCGGCGTGCCCATCTCCAGGGACAACGCCAAATTTC GTCACATCATCTTCATTGATGGCGTCTCCGTCCCCATGGGCGACGCCACCAGGGGCAGCC ACGGCTCAGCAATCATCAGCTCCATCGATGGGAGATTTGTGGACCAACATAAAGGCTGAT CTCGCAAAGATGCAAGCCACGCTCCAGAAGGTTGAGCAAGGGCTGCTACAAATCAAGGCA GCAGTGCAACATGAGCAGCACCAGCTGGCGTTGTCCGCACGGCTCCGGACGTCGGCGGCT GTGGGCATACAAGCTGCTGCTCGTGGCTTCCTTGCACGACGGAGAGTGCGGGAGATGCGC CGGCAGATGCTCGAGGCAGCCTTGGTGACGGTTGATCTCGGCACACGGGGGTGCGACCTT GCCCTGTCGGACGGCCATCAGCAGTGGCACCGGGCCGCTATCTCCAAGTGCGAGTATGGT ACGTGTCCCGTGGGCGACGAACTTCAACTCTACGGCAGTGGCGGTAGGGAAATTACTCAC CTCGTCATCAACAAGGGCGCACTATTTAGCGCCACCACACGAGGGCGCCTCCGGTGGTTA TTGTTGCGACCTATTCCAGGTGTCTGTCCATGTGCTCCCCTTTCGTGCAGATGGCGTCCA TGGGATCCAGGTGGCTGCACACGTGCAAGTCCAATGCGCGGAGGGTGTCCGCCTTATCTT ATGGGGTAAAAAATTAGATTCAGAATAATAAGATAAGCCGAGATGTAAAAGGCTTGTCTT CTAGGTGTCTGGTTTTGGGTCAAGTAGACTCGGTCTTTGAGCACCCGTTATGTGGCAGCT CGAGGACGAGCTGCTTGTCCAGGAGGGGTGTAGTGTCAGGGCCTAAGGAGGCCCACGGAG GGGCTGCGACAGCAGCAGCTATGGGCCCTCCAAGGGGGATTAGATAAGGATAGTTAGAGA TAAGATTAGAAGATTAGTTGAGATTATTTAGGAGATTAGTTGAGATTATCTAGGAAGGTT ATCAGTTAGTAGTTTGTTGAGAGTTTTTAGGAGAGTTTTAAGGAGATAAGGATCAGTAGC TAGATAGGGGCGGCCGGCTGGCCTATTTATGTAATCAATTGATGAGAAATAAAGTAGGCA AGAATTAGAAGGGAGAAACCCTCATCTTGCTCGGCCGTGGGCCTCTCGGCCGACGTTCCT GCCCATCGATACCCCTCTCCAATCCCTCACCGATCTAGCGACCATAACACATAGCCATAT GGAAAGTTGGAAACTCCAGCTTCTATCTTTGCTCAATGATTGAAGTTTAGTGAGTACACT TAGTCTCTTAACAGTTTTAAGACACACTTTGTTCCTTATCTGCCCTCCACCATAGCCTCT GTGGCGCTGTTGCTCCATCTCTGCAAGAGAAATCAAATACATTATACTCTAAACAATATC ATGTAAATGAGTAATTTAACAGTTCAAAAAATTACCTGTTCTAACCTTGTTTGTGTTTCA GGGTTGCAATCTAGCACATATTACACATCAGTGGCTGATAAGAAACTGCATCCAGTGGAT GTAAATTTCATTGGATTTGAGTTTTGGTTGAGATGGCAGTTGGATTGACATCTCAGCTGT TCCAAAGAGTAACTGCTACTGACATCTTTTGCCAAAGGAACAAATTTAGGAGTTCTGAGA TGAGGAGTTCTCTTCCCTTGCCATCCACCTCGTTTCCTTCAGTTGCTGATAGGCGAGACT GTTGGGGTCGCAATGTGTTAGAGAGTAGCTGCATGCCCATGCTTTATACACCTCGCAGAT ATAGATCTTTGGGCTTTAGATCTTTTGCCTTGCCAATTCCTTTGAAGGAAATTCCTCTTG TCAAGAACACATCATTAGCACTAACTAGGTCATGTGATGCTTTACTTGCAAATCCTGCTA CCTCACTTGTGGTCCCTGCAATCGGGATTATTGTGTTTGCTCTGTGGGGTTTTTTGCCTC TAATGCGGGATATTAGAAACCGTTTTGATCATGGAGGCAACTGGAAGAAGAGTCCTACAT ATTTGATTTCTTCGTCGTACCTTCAACCTCTACTTCTCTGGACAGGAGCAACACTAATCT GCAGGGGTTTGGATCCAGTTGTCTTGCCTTCAGCAGCAAGTCAAGCTGTGAAAACACGTC TGATAACTTTTGTGAGATCATTATCAACTGTCCTGGCTGTTGCATATATTCTCACAAGCT TGATTCAGCAGGTACAAAAGTTTCTTATGGACATGCGCAATCCCAATGATACAAGAAATA TGGGGTTTGATTTTACCATGAAAGCTCTTTATACTGGTGTTTGGATTGCTTCTGTTTCTC TCTTTATGGAGTTGCTGGGTTTCAATACCCAGAAGTGGATAACTGCTGGAGGGTTTGGGA CAGTGTTGCTTACACTTGCTGGTCGAGAGATTTTTACTAACTTCCTCTCAAGTGTCATGA TCAATGCAACACGCCCATTTGTAGTCAATGAATGGATCGATGCAAAGATAGATGGTGTTG ATGTCTCTGGCATTGTTGAGCATGTTGGTTTGTGGTCTCCAACACTCATTAGAGGTGTTG ATCGAGAAGCGATATACATTCCTAACCATAAGTTTACAGTTTCTATATTAAGGAATAACA CTCAGAGGACCCATTGGCGTATTAAGACCTATCTTGCTATTAGCCACATGGATGCTGGAA AAATTGGGACTATAGTTGCTGACATGAGGAAAGTTTTGGCAAAAAATCCGCATATAGAAC AACAAAAGCTGCACAGGAGAGTATTCTTTGAGAAAATTGATCCAAAAAATCAAGCACTTA TGATTTTCATATCCTGCTTTGTAAAGACATCACATTTTGAGGAGTATCTCAATGTCCAGG AAGCTGTTATGTTGGACCTTCTTAGAATAGTTGGGCATCACAAAGCAAGGCTTGCTACCC AAATTCGAACAGTTCAGAAATCATATGGCAATGCAGACTTCGATAACATTCCTTTTGGAG AGGACATGTATAGTCGAGTCCGTGGCCGGCCACTTCTGATTGATACATCTGCAAGGATCA GTGATGACAAACCCAGGCCTCGACCTGTATCATCACGTGAGGAGCAGAAAGTCAAGACAA ATGGCTCGGTAGATATTAAGTCCAGTTCCCCTGAAAATGCTAGTTCAAGCAACTCTGAAA AGCAGGAACCGAAAAAAATGGTGCCTGAAGATACTCGGGTGAAGAACATTAAGGGTGATA ATGTGATGCCAGTAACACCATCTTTAGATCCTGCTACGTCAACTTCCAAGGCTGGTAAAG GGAAGACACGGGAACCAGAGCCCACTGAGCGGCAAGGAGATGGGTCAGTCTCGGTGGCTA ATCCAAAGAAAGAATCTAGACCAGTTTTTGAAGATAACATTGTTCTGGGCGTAGCCCTTG AGGGTTCCAGGAGGACACTGCCTATTGAAGAAGGAAATCCTCATCTATCACTATCTGAGA CTGAGGTGGACACCGAAGAGGCGGCTTCATCACCGAAGGATAAGATAGGCCAAAGCCCAA AACTTTGAGGTCCAGAAAAAAAGCCGTTCAGAGGAATCTCGATAGGTCATCCGAGTTCAA ACTGTATCCTTGTGAAGATTTGTCACCAAGCCTACCTTTTTTGTGCGCTTGTGCAAATAC AATGCCACCACACATCAGTGTTGTATGCTTAAGGGGTAAATTCACACTGACGATTATTCA GGGAACATTACCTGTCAGTCGTATTGCTACAGGCTTGTAAAGAAGCAAGTGCTTCAATAG GCATTTTGTAAAGATTATATTATTGCTCATTTAAGTGGCTTCTTG