Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029594_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:78239819:78241044:-1 gene:Zm00001d029594 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:allene oxide cyclase1 description: allene oxide cyclase1
Sequence

ATGGCCGCCGCGCTCAGGTGCCCGGCCTCCGTCAGGGTCTCGGGCCCCGCCGCCGCGGGG
CTCGCCAAGGTGCGCCAGGCGTCCAGAGTCGTCGCGGTGAGCGGGGCCCGGCAGAGCCGC
GGCGGCGGCGTCGCCGTGCGGGCGTCGCTGTTCTCGCCCAAGCCCGCGGCGGCCAAGGAC
GCGCGGCCGACCAAGGTGCAGGAGCTGTACGTGTACGAGATCAACGAGCGGGACCGCGAG
AGCCCCGCGTACCTGCGCCTCAGCGCCAAGCAGACGGAGAACGCGCTGGGCGACCTCGTC
CCCTTCACCAACAAGGTGTACAACGGCAGCCTGGACAAGCGGCTGGGCGTCACCGCGGGC
ATCTGCGTGCTCATCCAGCACGTCCCCGACCGCAACGGCGACCGCTACGAGGCCATCTAC
AGCTTCTACTTCGGAGACTACGGCCACATCTCGGTGCAGGGCCCGTACCTGACCTACGAG
GAGTCGTACCTGGCGGTCACCGGCGGCTCCGGCGTCTTCGAGGGCGTCTACGGCCAGGTC
AAGCTCAACCAGATCGTCTTCCCCTTCAAGATCTTCTACACCTTCTACCTCCGGGGCATC
CCGGACCTGCCCAGGGACCTGCTCTGCACGCCCGTCCCGCCGTCGCCCACCGTCGAGCCC
ACCCCCGCCGCCAGGGCCGCCGAGCCGCACGCATCCCTCGACAACTACACCAACTGA

Peptide Sequence

PEP ID

Zm00001d029594_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:78239819:78241044:-1 gene:Zm00001d029594 transcript:Zm00001d029594_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:allene oxide cyclase1 description: allene oxide cyclase1
Sequence

MAAALRCPASVRVSGPAAAGLAKVRQASRVVAVSGARQSRGGGVAVRASLFSPKPAAAKD
ARPTKVQELYVYEINERDRESPAYLRLSAKQTENALGDLVPFTNKVYNGSLDKRLGVTAG
ICVLIQHVPDRNGDRYEAIYSFYFGDYGHISVQGPYLTYEESYLAVTGGSGVFEGVYGQV
KLNQIVFPFKIFYTFYLRGIPDLPRDLLCTPVPPSPTVEPTPAARAAEPHASLDNYTN

Transcript Sequence

Transcript ID

Zm00001d029594_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:78239819:78241044:-1 gene:Zm00001d029594 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:allene oxide cyclase1 description: allene oxide cyclase1
Sequence

GGTCACCCAAAATGCCTAGTAAATAAACACACCACTGACCAACTTGCCTACTTCTAGTGC
CACCCACCAACTTCCCCTTCCCCGTCGCATCGCATCGAGAGCGGGGCTGTACCGTGCGAG
ACTCTACTGCTCGATCGCCATGGCCGCCGCGCTCAGGTGCCCGGCCTCCGTCAGGGTCTC
GGGCCCCGCCGCCGCGGGGCTCGCCAAGGTGCGCCAGGCGTCCAGAGTCGTCGCGGTGAG
CGGGGCCCGGCAGAGCCGCGGCGGCGGCGTCGCCGTGCGGGCGTCGCTGTTCTCGCCCAA
GCCCGCGGCGGCCAAGGACGCGCGGCCGACCAAGGTGCAGGAGCTGTACGTGTACGAGAT
CAACGAGCGGGACCGCGAGAGCCCCGCGTACCTGCGCCTCAGCGCCAAGCAGACGGAGAA
CGCGCTGGGCGACCTCGTCCCCTTCACCAACAAGGTGTACAACGGCAGCCTGGACAAGCG
GCTGGGCGTCACCGCGGGCATCTGCGTGCTCATCCAGCACGTCCCCGACCGCAACGGCGA
CCGCTACGAGGCCATCTACAGCTTCTACTTCGGAGACTACGGCCACATCTCGGTGCAGGG
CCCGTACCTGACCTACGAGGAGTCGTACCTGGCGGTCACCGGCGGCTCCGGCGTCTTCGA
GGGCGTCTACGGCCAGGTCAAGCTCAACCAGATCGTCTTCCCCTTCAAGATCTTCTACAC
CTTCTACCTCCGGGGCATCCCGGACCTGCCCAGGGACCTGCTCTGCACGCCCGTCCCGCC
GTCGCCCACCGTCGAGCCCACCCCCGCCGCCAGGGCCGCCGAGCCGCACGCATCCCTCGA
CAACTACACCAACTGAACTGATGATTGATGAATCCATTATCATCCATCTCTGCTCTGTCT
GTCGCGGCTGTCAGAACTTGACGAGACAAGCTCCCCTGCTACTCATCAGTACTCCTCACT
CGTAGCCGTAGTTTGGCTACTCTTATGTGTGTATGGCTGGTTTCTTCAATTCGTGAGTGC
GTGGTAGTACCAATAAGCAATAAGACGCAGAGGGATCGATCAAGCTGTGTGCTTCACTTG
GCTGCTTCTGATTACAATTGATCAATGGTAACGTAAACGGT