Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029573_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:77065338:77070098:1 gene:Zm00001d029573 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ragged seedling2 description:Protein argonaute 7
Sequence	ATGGAGGGGGAAGCGGTGCCCAAGAACGAGAGGAAGGCCGGCGGCGGCGGCGGCGGAGGC GTTAGCAATGACGGTGGCGCGAGCGCGAATGCGAGGAGGAGGTGGAAGGGCGGAGGCGGC AGGCATCACCCGATCATCCAGGCCTACCCGGCGCTCCTGCCGTTGCCGCTACACGCGCGT CGCAACGGCATCATCGCGCTGCCGCTGCCGCCGCCCGTGCTGGTCTACTTGCACCAGCCG CCGCCGCCGCCGCTGCTGTTCCCCAAGGTGCCGGCGTGCTACGGGAAGCCCACCGGCCCC CCGCTGCTTAGGGGGCCGCCGTGGAGATCGAGGAAGCCGCCGCCGCCGCCGCACGCCGTC ACCGCCGCGCTGCTGCCGCTACCGCACGATACCGAGCTGATTCAGCACAAGTGCTTCATT CACGAGAACCAAACATCAGAAACGAAGCCAAATCATCTGAGCACCCATCACAACTCATCC ACCACCGTGCATGGAGTTACCGTTGCGACCAGACCAGACAGTGGCGGTGTTGGGGGGACT GCAATTCCTCTCTACGCAAACCATTTCCTCGTGCGTTTCGATCCCGGGCAGAAGATCTTT CATTACGATGTCGACATATCCCCGCACCCGTCAAAAGAAACGGCGAGAATGATCAAGAAC AAGCTAGTTGAGGAAAACTCAAATGTCCTCTCGGGCGCCCTTCCGGCCTTCGATGGCCGC AAGAATCTATTTAGTCCCATTGAGTTTCAACAGGACAGGCTTGAATTCTTCGTTAGCCTT CCAGCAGCTGCATCAACAAGGTTTATAGCAGCTAAAGAGAATGCCCACATGGTTGACAGG CACAACCATAAGGTTTTCAGGGTGAACCTTCGGTTGGTTTCGAAGCTGAGCGGCGAGGAC TTGAACAAGTATTTGAATGAAGAGAAGGATGGCATTCCTCTTCCTCAAGACTACCTTCAT GCACTGGATGTCATCCTGAGGGAAGGCGCTATGGAGAAATCTATTCCCATAGGCCGGTCT TTGTATTCGCGTTCCATGGGAGAGGCGAAGGAGATTGGTGGTGGAGCTGTCGTGTTACGA GGTTTCTTCCAGAGCTTGAGGCCAACGAAGCAAGGTCTTGCCCTCAATGTTGACCTCTCG CTTACAGCGTTCCATGAAAATACGGGCATAATCGCATACTTGCAGAAGCGCTGTGACTTT ATGAAGGACCTTTCGCAGGTGAAGACTAGGGCATTGGCGGTAGATGAGAGGAGGGAGGTG GAGAAAGCATTGAAGAACATCCGAGTTTTCGTGTGCCACCGTGAAACTGACCAAAGGTAC CATGTGCATGGCCTGACCGAGGAGACAACGGAGAACCTCAAGTTCCGAGACCGCAGCGGC AAGGATTATACGGTGGTAGATTACTTCAAAGAGCACTACAACCATGATATTAAATTCAGG AACCTGCCCTGCCTGCAGATTGGTAAGAGCAAGCCATGCTATGTGCCAATGGAGCTTTGC GTGGTTTGCGAGGGCCAGAAGTTTCTTGGCAAGCTCTCAGATGAACAGACCTCCAAAATG CTCAGAATGGGCTGCCAAAGGCCAAGCGAAAGAAAGGGAATCATAAAGGGTGTTGTTGAA GGAGCATTTGCTACAAGAAGCAATTCGTATGCGGATCAGTTCAACCTTGAAGTGTCCAAG GACATGACTCAGCTATTGGGGAGGGTCCTCTTGCCACCGAAACTGAAGCTCGGCAAGGGG GGGCGCATCAAGGATCTAACACCGGACAGGTTTGATCGGCAATGGAATTTGATGGACAGC CATGTCGCCGAGGGTTCCAAGATCAAGAGCTGGGCTTTGATAAGCTTTGGTGGCAGCCCA GAGCATCAGTCTTTCATTCCAAAGTTTATCAACCATCTAGCAAGCCGCTGTGAGCAGCTT GGGATCTTACTCAGCAAGAAAACAGTCGTCAGCCCATTGTTCGAGCGGATCCAAATCCTG AACAACGTGGGCGTTCTGGAGAGCAGGCTGAAGAAAATCCAGGAAGCTGCCTCCGGCAAT TTACAGCTGCTAATCTGCGTCATGGAGCGGAGGCACCGGGGCTATGCTGATCTGAAGCGT ATCGCAGAAACGTCCATTGGCGTCTTGACGCAGTGCTGCCTGTATTCCAACTTGAGCAAG CTAAGCTTCCAGTTCTTGGCCAACTTAGCGCTGAAGATAAACGCGAAGCTTGGCGGATGC AACGTCGCCCTCTACAACAGCTTGCCGTGCCAGATTCCTAGGGTGTTTTCGGACGAGGAG CCAGCGATGTTCATGGGTGCCGACGTGACACACCCGCACCCCCTAGACGACTCGAGCCCG TCCGTGGTCGCCGTGGTCGCGAGCATGAACTGGCCTTCGGCGAACAAGTACATCTCCAGG ATGAGGTCGCAGACGCACCGCAAAGAGATCATCGAGCGCCTGGACGTGATGACCGGCGAG CTGCTCGACGAGTTCGTGAAGGAAGTCGGCAAGCTCCCCAGCAGAATCATATTCTTCAGG GACGGCGTCAGCGAGACGCTGTTCTACAAGGTGCTGACGGAGGAGCTGCAGGCGGTGCGG CTGGCGTGCTCGAGGCACCCGGGCTACAAGCCGGCGATCACGTTCGTGGTGGTCCAGAAG AGGCAGCACACCAGGCTGTTCCACAGGGAGAAGAATGGCGGCGGTGGCGGCGGCTCCACG CACTACGCCGACCAGAATGTGCCGCCGGGGACGGTGGTGGACACCGTGATCACGCATCCG AGGGAGTTCGACTTCTACCTGTGCAGCCACTGGGGCACCAAGGGGACGACCAGGCCGACG CACTACCGCGTGCTGTGGGACGAGAACGGCTTCGGGTCCGACGAGATGCAGCAGCTGATA CACAGCCTTTGCTACACGTTCGCCCGGTGCACCAAGCCCGTGTCCCTCGTCCCGCCGGCG TACTACGCGCACCTGGCCGCGTACAGAGGACGGCTGTACCTTGAGAGGTCGGACTCGGCG GCGACCGGCCGGACGACTCTGTACAGGGCGGCGCCATTGCAGACTGCGCCGCTCCCTAAG CTCAGAGATAGCGTGAAGGGGCTCATGTTCTACTGCTGA

Peptide Sequence

PEP ID	Zm00001d029573_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:77065338:77070098:1 gene:Zm00001d029573 transcript:Zm00001d029573_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ragged seedling2 description:Protein argonaute 7
Sequence	MEGEAVPKNERKAGGGGGGGVSNDGGASANARRRWKGGGGRHHPIIQAYPALLPLPLHAR RNGIIALPLPPPVLVYLHQPPPPPLLFPKVPACYGKPTGPPLLRGPPWRSRKPPPPPHAV TAALLPLPHDTELIQHKCFIHENQTSETKPNHLSTHHNSSTTVHGVTVATRPDSGGVGGT AIPLYANHFLVRFDPGQKIFHYDVDISPHPSKETARMIKNKLVEENSNVLSGALPAFDGR KNLFSPIEFQQDRLEFFVSLPAAASTRFIAAKENAHMVDRHNHKVFRVNLRLVSKLSGED LNKYLNEEKDGIPLPQDYLHALDVILREGAMEKSIPIGRSLYSRSMGEAKEIGGGAVVLR GFFQSLRPTKQGLALNVDLSLTAFHENTGIIAYLQKRCDFMKDLSQVKTRALAVDERREV EKALKNIRVFVCHRETDQRYHVHGLTEETTENLKFRDRSGKDYTVVDYFKEHYNHDIKFR NLPCLQIGKSKPCYVPMELCVVCEGQKFLGKLSDEQTSKMLRMGCQRPSERKGIIKGVVE GAFATRSNSYADQFNLEVSKDMTQLLGRVLLPPKLKLGKGGRIKDLTPDRFDRQWNLMDS HVAEGSKIKSWALISFGGSPEHQSFIPKFINHLASRCEQLGILLSKKTVVSPLFERIQIL NNVGVLESRLKKIQEAASGNLQLLICVMERRHRGYADLKRIAETSIGVLTQCCLYSNLSK LSFQFLANLALKINAKLGGCNVALYNSLPCQIPRVFSDEEPAMFMGADVTHPHPLDDSSP SVVAVVASMNWPSANKYISRMRSQTHRKEIIERLDVMTGELLDEFVKEVGKLPSRIIFFR DGVSETLFYKVLTEELQAVRLACSRHPGYKPAITFVVVQKRQHTRLFHREKNGGGGGGST HYADQNVPPGTVVDTVITHPREFDFYLCSHWGTKGTTRPTHYRVLWDENGFGSDEMQQLI HSLCYTFARCTKPVSLVPPAYYAHLAAYRGRLYLERSDSAATGRTTLYRAAPLQTAPLPK LRDSVKGLMFYC

Transcript Sequence

Transcript ID	Zm00001d029573_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:77065338:77070098:1 gene:Zm00001d029573 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ragged seedling2 description:Protein argonaute 7
Sequence	ATCGTAGAGATGCTCCTCCTCCTTCCTTCCCTCCCCTCGGCTTCTCTCCTGTCCCCCACC TCTGCGCCTGCCATACCATTAATACCTCCTCCAGTCCTCTCTCTCTCTCTCAGCAGAGGC AGAGGCAGCCATCCATCCCCTTCCGAGTTCCGCCCCACTCTTCCCCTCTCCAGCTTCCTC CTTTTTGCCCCCCTACCTTCCAACCATCCAAGAAACCCACACAAGGCCAACCCACGCCCA CGCCGCGCCGCGCCACGCCAAAAGGAGCCCAAGAAGCTGTGATCCTGCTGCCCCGGAAGA AGCTGCGCAGCAGTACCAAGTAGTACGAACAAATTGGACCGGGGTAGCGCTTACTTCCCG CTGCCCGGTGGCAGCAGCAGAAACTCGGCCATGGAGGGGGAAGCGGTGCCCAAGAACGAG AGGAAGGCCGGCGGCGGCGGCGGCGGAGGCGTTAGCAATGACGGTGGCGCGAGCGCGAAT GCGAGGAGGAGGTGGAAGGGCGGAGGCGGCAGGCATCACCCGATCATCCAGGCCTACCCG GCGCTCCTGCCGTTGCCGCTACACGCGCGTCGCAACGGCATCATCGCGCTGCCGCTGCCG CCGCCCGTGCTGGTCTACTTGCACCAGCCGCCGCCGCCGCCGCTGCTGTTCCCCAAGGTG CCGGCGTGCTACGGGAAGCCCACCGGCCCCCCGCTGCTTAGGGGGCCGCCGTGGAGATCG AGGAAGCCGCCGCCGCCGCCGCACGCCGTCACCGCCGCGCTGCTGCCGCTACCGCACGAT ACCGAGCTGATTCAGCACAAGTGCTTCATTCACGAGAACCAAACATCAGAAACGAAGCCA AATCATCTGAGCACCCATCACAACTCATCCACCACCGTGCATGGAGTTACCGTTGCGACC AGACCAGACAGTGGCGGTGTTGGGGGGACTGCAATTCCTCTCTACGCAAACCATTTCCTC GTGCGTTTCGATCCCGGGCAGAAGATCTTTCATTACGATGTCGACATATCCCCGCACCCG TCAAAAGAAACGGCGAGAATGATCAAGAACAAGCTAGTTGAGGAAAACTCAAATGTCCTC TCGGGCGCCCTTCCGGCCTTCGATGGCCGCAAGAATCTATTTAGTCCCATTGAGTTTCAA CAGGACAGGCTTGAATTCTTCGTTAGCCTTCCAGCAGCTGCATCAACAAGGTTTATAGCA GCTAAAGAGAATGCCCACATGGTTGACAGGCACAACCATAAGGTTTTCAGGGTGAACCTT CGGTTGGTTTCGAAGCTGAGCGGCGAGGACTTGAACAAGTATTTGAATGAAGAGAAGGAT GGCATTCCTCTTCCTCAAGACTACCTTCATGCACTGGATGTCATCCTGAGGGAAGGCGCT ATGGAGAAATCTATTCCCATAGGCCGGTCTTTGTATTCGCGTTCCATGGGAGAGGCGAAG GAGATTGGTGGTGGAGCTGTCGTGTTACGAGGTTTCTTCCAGAGCTTGAGGCCAACGAAG CAAGGTCTTGCCCTCAATGTTGACCTCTCGCTTACAGCGTTCCATGAAAATACGGGCATA ATCGCATACTTGCAGAAGCGCTGTGACTTTATGAAGGACCTTTCGCAGGTGAAGACTAGG GCATTGGCGGTAGATGAGAGGAGGGAGGTGGAGAAAGCATTGAAGAACATCCGAGTTTTC GTGTGCCACCGTGAAACTGACCAAAGGTACCATGTGCATGGCCTGACCGAGGAGACAACG GAGAACCTCAAGTTCCGAGACCGCAGCGGCAAGGATTATACGGTGGTAGATTACTTCAAA GAGCACTACAACCATGATATTAAATTCAGGAACCTGCCCTGCCTGCAGATTGGTAAGAGC AAGCCATGCTATGTGCCAATGGAGCTTTGCGTGGTTTGCGAGGGCCAGAAGTTTCTTGGC AAGCTCTCAGATGAACAGACCTCCAAAATGCTCAGAATGGGCTGCCAAAGGCCAAGCGAA AGAAAGGGAATCATAAAGGGTGTTGTTGAAGGAGCATTTGCTACAAGAAGCAATTCGTAT GCGGATCAGTTCAACCTTGAAGTGTCCAAGGACATGACTCAGCTATTGGGGAGGGTCCTC TTGCCACCGAAACTGAAGCTCGGCAAGGGGGGGCGCATCAAGGATCTAACACCGGACAGG TTTGATCGGCAATGGAATTTGATGGACAGCCATGTCGCCGAGGGTTCCAAGATCAAGAGC TGGGCTTTGATAAGCTTTGGTGGCAGCCCAGAGCATCAGTCTTTCATTCCAAAGTTTATC AACCATCTAGCAAGCCGCTGTGAGCAGCTTGGGATCTTACTCAGCAAGAAAACAGTCGTC AGCCCATTGTTCGAGCGGATCCAAATCCTGAACAACGTGGGCGTTCTGGAGAGCAGGCTG AAGAAAATCCAGGAAGCTGCCTCCGGCAATTTACAGCTGCTAATCTGCGTCATGGAGCGG AGGCACCGGGGCTATGCTGATCTGAAGCGTATCGCAGAAACGTCCATTGGCGTCTTGACG CAGTGCTGCCTGTATTCCAACTTGAGCAAGCTAAGCTTCCAGTTCTTGGCCAACTTAGCG CTGAAGATAAACGCGAAGCTTGGCGGATGCAACGTCGCCCTCTACAACAGCTTGCCGTGC CAGATTCCTAGGGTGTTTTCGGACGAGGAGCCAGCGATGTTCATGGGTGCCGACGTGACA CACCCGCACCCCCTAGACGACTCGAGCCCGTCCGTGGTCGCCGTGGTCGCGAGCATGAAC TGGCCTTCGGCGAACAAGTACATCTCCAGGATGAGGTCGCAGACGCACCGCAAAGAGATC ATCGAGCGCCTGGACGTGATGACCGGCGAGCTGCTCGACGAGTTCGTGAAGGAAGTCGGC AAGCTCCCCAGCAGAATCATATTCTTCAGGGACGGCGTCAGCGAGACGCTGTTCTACAAG GTGCTGACGGAGGAGCTGCAGGCGGTGCGGCTGGCGTGCTCGAGGCACCCGGGCTACAAG CCGGCGATCACGTTCGTGGTGGTCCAGAAGAGGCAGCACACCAGGCTGTTCCACAGGGAG AAGAATGGCGGCGGTGGCGGCGGCTCCACGCACTACGCCGACCAGAATGTGCCGCCGGGG ACGGTGGTGGACACCGTGATCACGCATCCGAGGGAGTTCGACTTCTACCTGTGCAGCCAC TGGGGCACCAAGGGGACGACCAGGCCGACGCACTACCGCGTGCTGTGGGACGAGAACGGC TTCGGGTCCGACGAGATGCAGCAGCTGATACACAGCCTTTGCTACACGTTCGCCCGGTGC ACCAAGCCCGTGTCCCTCGTCCCGCCGGCGTACTACGCGCACCTGGCCGCGTACAGAGGA CGGCTGTACCTTGAGAGGTCGGACTCGGCGGCGACCGGCCGGACGACTCTGTACAGGGCG GCGCCATTGCAGACTGCGCCGCTCCCTAAGCTCAGAGATAGCGTGAAGGGGCTCATGTTC TACTGCTGATCTTATGATGATTTTTAGTGGTGGTTATGAAGGGGCCGGCGTTCTCTTTGC CCATATATCGCGTGCGTTCTATATTCTGGTGTTGTATTATTTGGGAATCATGTATAGTGT CTGTGGAGCGGCATGTGCAAGACTGCGAGTCTGCGATGCTCATGATACTTTGCTAGTGGC ATGCAAAAAATTCCGATCCCTAACTGTTAGGTGTACTAGAGTATTGGTAGGGACCCGTGT GCATGTAGGATGGGGCCTCGCATTTTGCACCGTGTGGGTAGGCACGCTGGCCTTGGAATG CAAGACTATTTGCCGTCTTCTTG