Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029568_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:76658393:76659887:1 gene:Zm00001d029568 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine protease
Sequence	ATGGCTCTCTTCCGTGCCGCCGCCTCAGGAGGGTTCGCGCTGATCCTTCTCGCGTGCTGC AGCCTCATAATGCTGGCGGCGGCGTCTGGCGGCGGCGGCGTGGACGACGACGGCGTCGGT GGTGACAGGCTGATGATGGACCGGTTCCTCAGCTGGCAGGCGACGTACAACCGGTCGTAC CCGACGGCGGAGGAGAGGCAGCGCCGGTTCCAGGTGTACCGCCGCAACATTGAGCACATC GAGGCCACCAACCGGGCGGGCAACCTGACGTACACGCTCGGCGAGAACCAGTTCGCCGAC CTCACGGAGGAGGAGTTCCTGGACCTGTACACCATGAAGGGGATGCCCGTCCGCCGTGAC GCCGGCAAGAAGCGGGCCAACGTATCCTCCTCCGCCGCTGCCGTGGACGCTCCGACCAGC GTCGACTGGAGGTCCAAGGGCGCCGTCACGCCGATCAAGAACCAGGGCCCGTCGTGCTCT AGCTGCTGGGCATTCGTGACGGCGGCGACGATCGAGAGCATCACCAAGATCACGACAGGG AAGCTGGTGTCGCTGTCGGAGCAGGAGCTGATCGACTGCGACCCCTACGACGGCGGCTGC AACCTGGGCTACTTCGTGAACGGCTACAGGTGGGTGATCCAGAACGGCGGGCTCACCACC GAGGCCAACTACCCGTACCAGGCGCGGCGGTACGCGTGCAGCCGCTCCAGGGCCGCCCAG CACGCCGCCACCATCTCCGACTACGTGCAGCTGCCGGCGGGCGAGGGCCAGCTGCAGCAG GCGGTGGCGCAGCAGCCCGTGGCCGCGGCCATCGAGATGGGCGGCAGCCTGCAGTTCTAC AGCGGCGGCGTCTTCTCGGGGCAGTGCGGGACCAGGATGAACCACGCCATCACCGTCGTC GGCTACGGCGCCGACTCCTCCTCGGGCCTCAAGTACTGGCTCGTCAAGAACTCGTGGGGG CAGAGCTGGGGCGAGCGCGGATACCTGCGGATGCGCCGCGACGTCGGGCGCGGGGGACTG TGCGGCATCGCGCTCGACCTCGCGTACCCGGTCGTGTGA

Peptide Sequence

PEP ID	Zm00001d029568_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:76658393:76659887:1 gene:Zm00001d029568 transcript:Zm00001d029568_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine protease
Sequence	MALFRAAASGGFALILLACCSLIMLAAASGGGGVDDDGVGGDRLMMDRFLSWQATYNRSY PTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYTMKGMPVRRD AGKKRANVSSSAAAVDAPTSVDWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG KLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGLTTEANYPYQARRYACSRSRAAQ HAATISDYVQLPAGEGQLQQAVAQQPVAAAIEMGGSLQFYSGGVFSGQCGTRMNHAITVV GYGADSSSGLKYWLVKNSWGQSWGERGYLRMRRDVGRGGLCGIALDLAYPVV

Transcript Sequence

Transcript ID	Zm00001d029568_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:76658393:76659887:1 gene:Zm00001d029568 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine protease
Sequence	ATCCATGCTTAAGGTGAAGCAAGCAGCACACGAGACGATATAGAGGGAGGGATCATGGCT CTCTTCCGTGCCGCCGCCTCAGGAGGGTTCGCGCTGATCCTTCTCGCGTGCTGCAGCCTC ATAATGCTGGCGGCGGCGTCTGGCGGCGGCGGCGTGGACGACGACGGCGTCGGTGGTGAC AGGCTGATGATGGACCGGTTCCTCAGCTGGCAGGCGACGTACAACCGGTCGTACCCGACG GCGGAGGAGAGGCAGCGCCGGTTCCAGGTGTACCGCCGCAACATTGAGCACATCGAGGCC ACCAACCGGGCGGGCAACCTGACGTACACGCTCGGCGAGAACCAGTTCGCCGACCTCACG GAGGAGGAGTTCCTGGACCTGTACACCATGAAGGGGATGCCCGTCCGCCGTGACGCCGGC AAGAAGCGGGCCAACGTATCCTCCTCCGCCGCTGCCGTGGACGCTCCGACCAGCGTCGAC TGGAGGTCCAAGGGCGCCGTCACGCCGATCAAGAACCAGGGCCCGTCGTGCTCTAGCTGC TGGGCATTCGTGACGGCGGCGACGATCGAGAGCATCACCAAGATCACGACAGGGAAGCTG GTGTCGCTGTCGGAGCAGGAGCTGATCGACTGCGACCCCTACGACGGCGGCTGCAACCTG GGCTACTTCGTGAACGGCTACAGGTGGGTGATCCAGAACGGCGGGCTCACCACCGAGGCC AACTACCCGTACCAGGCGCGGCGGTACGCGTGCAGCCGCTCCAGGGCCGCCCAGCACGCC GCCACCATCTCCGACTACGTGCAGCTGCCGGCGGGCGAGGGCCAGCTGCAGCAGGCGGTG GCGCAGCAGCCCGTGGCCGCGGCCATCGAGATGGGCGGCAGCCTGCAGTTCTACAGCGGC GGCGTCTTCTCGGGGCAGTGCGGGACCAGGATGAACCACGCCATCACCGTCGTCGGCTAC GGCGCCGACTCCTCCTCGGGCCTCAAGTACTGGCTCGTCAAGAACTCGTGGGGGCAGAGC TGGGGCGAGCGCGGATACCTGCGGATGCGCCGCGACGTCGGGCGCGGGGGACTGTGCGGC ATCGCGCTCGACCTCGCGTACCCGGTCGTGTGATTCATATACTATCATCGTATGCATGCA TGATGCGTACGTGCGTGCGCGCCTGCTTGTTGCATATCGGCGGCACGTACGTACGTGTAT ACATATATACGTACTACTACTACACTACGGATTGATCTGCATGCTGCGACGTATACCACG CATATATATATACACACATGAAAACTACGTGTAATCAATCGATACTAGTAGACATATACC AACGGTAACGTGTTGCATCCCATTGTAAAAGCCGGCTATCACTTTCAGGGACAAAATGCC CACATTAATTATTATAAAAGGCTTTGTTATTA