Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029561_T014
CDS Infomation

cds chromosome:B73_RefGen_v4:1:76215435:76224274:-1 gene:Zm00001d029561 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable ubiquitin conjugation factor E4
Sequence

ATGAATGGCTTGTATGATGGCCTTAAAGATGTCCTTTTAATCCTTCTAAAAAATTTGGAT
ACTCGAGAAAAGGTTCTTGAGTATATAGCAGAAGTGATAAATAAAAATGCATCCAGATCT
GGCATGCAGGTGGACCCATTAAAATGTGCGAGTTCAGGTATGTTTGTGAATCTTAGCGCT
GTGATGCTCCGTCTATGCGAGCCTTTTCTGGATAACATGGAAGCAAAGAAGGATAAGATT
GATGTCAATTACCTCTTCTGCAACAATAGAATTGATTTCAAAGATTTGACAGCTATAAAC
GCGTCTTCAGAAGAAGTCTCGTCTTGGATAGAGAGCATAAACAATGAGCATGCTCAAAAT
AATGCCAGTGGAGAGGCTCGATTTGCGGAATCACAGGAAGCCACAAGCTCTGGCAAAAAT
AGTACGGCCTCACAACTTAGGTGCTCAAAGAAGGAGAATTTCTCATTTATTTGCGAATGT
TTCTTCATGACCTCAAGAGTACTTAATCTCGGGTTGATGAAAGCTGTATCGGACTTCAAA
CATATTTCTCAGCAACTTTCAAGGTTCGAAGATGATTTGGAATCAAACAGAGCAGTGAGA
GATCAAGGAGGGGGTTCACCGCAGCTTGAGCAAGATATAACTCGCTTGGAGAAAATTGTC
GAAATTTTATCACAGGACAAATTCTGTTATGAAGCTCAGATACTACGGGATGGTGCATTC
CTTCAACGAGCATTATCTTTCTACAGGTTAATGATACTCTGGTCAGTTAACCTAGTTGGC
GGATTTAAGATGCCTTTGCCATCACAATGTCCCAAGGAGTTTGCTTGCATTCCAGAACAT
TTTCTTGATGATGCAATGGATTTACTTGTTCTAACCTCTAGAATTCCAAAGGCTTTGGAA
AGCTTTGTATTGGATGACTTTCTCAGCTTCATCATTATGTTCATGGGAAGCACATCTTAC
ATTAAGAATCCTTACCTAAGAGCAAAGATGGTTGAAGTTTTGAATTGCTGGATGCCACAA
AGAAGTGGCTTGAATTCTACAGCCTCATTGTTTGAGGGGCACCAACTGTGTCTTGACTAC
CTTGTTGGAAATCTTCTAAAGCTTTATGTGGATATTGAATTCACTGGCTCCCATACACAA
TTTTTTGACAAGTTTAACATTCGACATAATATTGCTGAGCTTCTGGAGTATTTATGGGAT
GTTCCTAGTCACCGAAACGCATGGAGACAAATAGCTAAAGAGGAGGAGAAGGGTGTATAC
TTAAATTTTCTTAACTTTCTCATAAATGATAGCATCTATCTTCTTGACGAGAGTTTGAAC
AAAATTCTTGAACTGAAAGAAATAGAGGCTGAAATGGCTAACATAGTTGAGTGGGAGCGC
AGACCTGCTCAAGAAAGAGAGGAGCGGCTGCGTGTATTTCATCAGTGGGAAAATATTGTT
CGTTTTGACATGAGGCTAGCCAATGAGGATGTTGGGATGCTTGCATTCACCTCTGAACAA
ATTCCAGCACCTTTCCTTCTCCCTGAAATGGTGGAAAGGGTTGCGAGCATGCTTAATTAC
TTCCTCTTGCAACTTGCTGGTCCCCAGAGGAAATCTTTGACTGTAAAGGATCCGGAGAAG
TACGAGTTCAAGCCGAAGCAGCTTTTGAAACAGATTGCCACCATCTATGTCCATATCTCA
AGGGGCGACAAGGAATCTGTCTTCTCAGCTGCAATCTCGAAAGATGGCAGAGCATACAAT
GATCAGTTGTTTTCTAGTGCGGCTAATATTCTGTGGAAGATTGGGGGTGATCCCAAAATC
ATACAGGAGTTTGTGCAACTTGCTGGTAGGGCAAAAGCTGCTGCTTCTGAAGCTATGGAT
GCTGAGGCAATCCTTGGGGACATACCAGATGAATTCCTCGATCCAATTCAGTATACTCTA
ATGAAAGATCCTGTGACACTGCCATCGTCAAAGGTCACAGTAGACCGGCCCGTAATTATC
AGGCATCTGCTGAGTGATTCTACAGATCCATTTAACCGCTCCCACCTCACTCAAGACATG
CTGATACCAAACACGGAGCTCAAGTTGCAGATCGAGGAGTTTGTCCGGTCCCAGCAGTCG
AGAAAGCGAACTGCTGCGGCGTTGTTGGAGATTGGCGAAGCGGAGGGTACTGATGATATG
GCCGAATGA

Peptide Sequence

PEP ID

Zm00001d029561_P014
PEP Infomation

pep chromosome:B73_RefGen_v4:1:76215435:76224274:-1 gene:Zm00001d029561 transcript:Zm00001d029561_T014 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable ubiquitin conjugation factor E4
Sequence

MNGLYDGLKDVLLILLKNLDTREKVLEYIAEVINKNASRSGMQVDPLKCASSGMFVNLSA
VMLRLCEPFLDNMEAKKDKIDVNYLFCNNRIDFKDLTAINASSEEVSSWIESINNEHAQN
NASGEARFAESQEATSSGKNSTASQLRCSKKENFSFICECFFMTSRVLNLGLMKAVSDFK
HISQQLSRFEDDLESNRAVRDQGGGSPQLEQDITRLEKIVEILSQDKFCYEAQILRDGAF
LQRALSFYRLMILWSVNLVGGFKMPLPSQCPKEFACIPEHFLDDAMDLLVLTSRIPKALE
SFVLDDFLSFIIMFMGSTSYIKNPYLRAKMVEVLNCWMPQRSGLNSTASLFEGHQLCLDY
LVGNLLKLYVDIEFTGSHTQFFDKFNIRHNIAELLEYLWDVPSHRNAWRQIAKEEEKGVY
LNFLNFLINDSIYLLDESLNKILELKEIEAEMANIVEWERRPAQEREERLRVFHQWENIV
RFDMRLANEDVGMLAFTSEQIPAPFLLPEMVERVASMLNYFLLQLAGPQRKSLTVKDPEK
YEFKPKQLLKQIATIYVHISRGDKESVFSAAISKDGRAYNDQLFSSAANILWKIGGDPKI
IQEFVQLAGRAKAAASEAMDAEAILGDIPDEFLDPIQYTLMKDPVTLPSSKVTVDRPVII
RHLLSDSTDPFNRSHLTQDMLIPNTELKLQIEEFVRSQQSRKRTAAALLEIGEAEGTDDM
AE

Transcript Sequence

Transcript ID

Zm00001d029561_T014
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:76215435:76224274:-1 gene:Zm00001d029561 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable ubiquitin conjugation factor E4
Sequence

CTCTCTCGAGTCTGCTCGAATCTTGATCCACCACAACACGCGGTTCCCCGAGTCGAAGGC
TCGAAGCAGCAGAGCCAGCAGCGAGCCGCCGCCCGCCGCCGATGGCGTCCCCATCGCCGG
CTTCCGCGCGGCCGCAGCGCTCTCCTGACGAGGTGGAGGACATCATCCTCCGCAAGATCC
TCCTCGTCTCCCTGACGCCCCCGGCCAACCCCAGCCCAGCCGTCGCCTACCTCGAGCTCA
CCGCCGCCGAGCTCCTCTCTGAGTCGCGCCCTCTCCTCGCCCTGCGCGATGCCGCCGAGC
GCCTCCTCATCGACCGCCTCTCGCTCCCGGACCCGCCCGCCGGGTCCCCGACCCCTTTCG
CCTACCTCGTCTCCGCTTTCCGCCGCGCCGCCGACGAGGCGCGTAAGATCTCCACCATCC
GCGACGCCGCTCTCCGGGCGCGCCTCGCAGCCTCCATAGCGCACCTCCGGGCCCTCATCC
TCTCCTACGCGCGCATCGTCGCCGGGAATCCCGACACCTTCCCCACCCCGCCCGGCGCGC
AACACCCCGCCTCCGACCTCCTCGTATTCCTCCTCGCTGAGGCAGCCGACCCGCTCGACC
CCACCCCGGCCCCCGGGGCGCCGCCGCCGCCGGGCTTCATTGATGAGTTCTTAGGCAGCG
CGGACTATGACTCCATCGAGCCGGCCATGGGGGAGCTATACGAGCTCCTTAGGCAGAGTG
TCGATAAGGTTTCGGCCCTCGGTGACTTTCAGCGCCCATTGCGGTTGCTCAGGCGGCTTG
TGGGGATCCCCAATTGTGCCAAGGCCCTGGTTAACCATCCTAAGTGGATACCAAAGAATC
AGATCATGCTCATTGGGGAAGGGAGGGTCATGGAGCTATACAGTGTACTCGGGGCCTTCT
TCCATGTAAGCGCCATCCGAGACCGAGAGTTCGCTAGCAAGCCTGATGTGGGGTCAGGCA
ACAGTGTTTCTCAGAGGCATCTTCACGTCGGCCAGCTGACTTGTTGTCATCTTTCACAAC
AATCAAGAGTGTTATGAATGGCTTGTATGATGGCCTTAAAGATGTCCTTTTAATCCTTCT
AAAAAATTTGGATACTCGAGAAAAGGTTCTTGAGTATATAGCAGAAGTGATAAATAAAAA
TGCATCCAGATCTGGCATGCAGGTGGACCCATTAAAATGTGCGAGTTCAGGTATGTTTGT
GAATCTTAGCGCTGTGATGCTCCGTCTATGCGAGCCTTTTCTGGATAACATGGAAGCAAA
GAAGGATAAGATTGATGTCAATTACCTCTTCTGCAACAATAGAATTGATTTCAAAGATTT
GACAGCTATAAACGCGTCTTCAGAAGAAGTCTCGTCTTGGATAGAGAGCATAAACAATGA
GCATGCTCAAAATAATGCCAGTGGAGAGGCTCGATTTGCGGAATCACAGGAAGCCACAAG
CTCTGGCAAAAATAGTACGGCCTCACAACTTAGGTGCTCAAAGAAGGAGAATTTCTCATT
TATTTGCGAATGTTTCTTCATGACCTCAAGAGTACTTAATCTCGGGTTGATGAAAGCTGT
ATCGGACTTCAAACATATTTCTCAGCAACTTTCAAGGTTCGAAGATGATTTGGAATCAAA
CAGAGCAGTGAGAGATCAAGGAGGGGGTTCACCGCAGCTTGAGCAAGATATAACTCGCTT
GGAGAAAATTGTCGAAATTTTATCACAGGACAAATTCTGTTATGAAGCTCAGATACTACG
GGATGGTGCATTCCTTCAACGAGCATTATCTTTCTACAGGTTAATGATACTCTGGTCAGT
TAACCTAGTTGGCGGATTTAAGATGCCTTTGCCATCACAATGTCCCAAGGAGTTTGCTTG
CATTCCAGAACATTTTCTTGATGATGCAATGGATTTACTTGTTCTAACCTCTAGAATTCC
AAAGGCTTTGGAAAGCTTTGTATTGGATGACTTTCTCAGCTTCATCATTATGTTCATGGG
AAGCACATCTTACATTAAGAATCCTTACCTAAGAGCAAAGATGGTTGAAGTTTTGAATTG
CTGGATGCCACAAAGAAGTGGCTTGAATTCTACAGCCTCATTGTTTGAGGGGCACCAACT
GTGTCTTGACTACCTTGTTGGAAATCTTCTAAAGCTTTATGTGGATATTGAATTCACTGG
CTCCCATACACAATTTTTTGACAAGTTTAACATTCGACATAATATTGCTGAGCTTCTGGA
GTATTTATGGGATGTTCCTAGTCACCGAAACGCATGGAGACAAATAGCTAAAGAGGAGGA
GAAGGGTGTATACTTAAATTTTCTTAACTTTCTCATAAATGATAGCATCTATCTTCTTGA
CGAGAGTTTGAACAAAATTCTTGAACTGAAAGAAATAGAGGCTGAAATGGCTAACATAGT
TGAGTGGGAGCGCAGACCTGCTCAAGAAAGAGAGGAGCGGCTGCGTGTATTTCATCAGTG
GGAAAATATTGTTCGTTTTGACATGAGGCTAGCCAATGAGGATGTTGGGATGCTTGCATT
CACCTCTGAACAAATTCCAGCACCTTTCCTTCTCCCTGAAATGGTGGAAAGGGTTGCGAG
CATGCTTAATTACTTCCTCTTGCAACTTGCTGGTCCCCAGAGGAAATCTTTGACTGTAAA
GGATCCGGAGAAGTACGAGTTCAAGCCGAAGCAGCTTTTGAAACAGATTGCCACCATCTA
TGTCCATATCTCAAGGGGCGACAAGGAATCTGTCTTCTCAGCTGCAATCTCGAAAGATGG
CAGAGCATACAATGATCAGTTGTTTTCTAGTGCGGCTAATATTCTGTGGAAGATTGGGGG
TGATCCCAAAATCATACAGGAGTTTGTGCAACTTGCTGGTAGGGCAAAAGCTGCTGCTTC
TGAAGCTATGGATGCTGAGGCAATCCTTGGGGACATACCAGATGAATTCCTCGATCCAAT
TCAGTATACTCTAATGAAAGATCCTGTGACACTGCCATCGTCAAAGGTCACAGTAGACCG
GCCCGTAATTATCAGGCATCTGCTGAGTGATTCTACAGATCCATTTAACCGCTCCCACCT
CACTCAAGACATGCTGATACCAAACACGGAGCTCAAGTTGCAGATCGAGGAGTTTGTCCG
GTCCCAGCAGTCGAGAAAGCGAACTGCTGCGGCGTTGTTGGAGATTGGCGAAGCGGAGGG
TACTGATGATATGGCCGAATGAATTGTGCCAGGAGCAGGGGATGGACACATTTTTTTTGT
GGGGAAAGAGTGATGGTTAATTCACATGAAATGTATCGGTCCATCTGTCCGTATAAAGTT
GGTTTCCCGGCTTGTGTCCCTGTTGCCTCGATTCTTTGTAAATATTGTAGGTGCAC