Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029557_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:76065155:76078721:1 gene:Zm00001d029557 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperone protein ClpB3 chloroplastic
Sequence

ATGGCCGCCGCGCCGCCTCTGTCCGCCGACGCACTTTCCTTCCTAACCTCCGCCCCCGCC
GCGGCCGCGGCCGTGCCGACGCCGGTCGTAGCCGCGGCGTGGGGCGCGGCGAGGGCGGGT
CATGTGAGGGGTAAGGCGGGACTAAGGACGACGGGAGGAGGAAGGGGCGGGGTACTGGCT
CCGGTGGTCGGGAAGAGGCTCTGCCGGACGCCGCTCTCCGTTCGCTGCAACGCCACCAGC
CGGGACGGCAGGATTACACAACAAGAGTTCACTGAGATGGCGTGGCAAGCAATTGTCTCA
TCCCCTGAGGTGGCGAAGGAGAGCAAGCACCAGATTGTGGAGACTGAGCATATGATGAAA
TCCCTGCTGGAGCAACGGAATGGCCTTGCCCGCCGCATTTTTTCTAAGGCAGGAGTTGAT
AATACAAGGCTTCTTGATGCCACGGAGAAGTTCATCCAGAGACAGCCTAAGGTATTAGGT
GAAGAACCTGGATCTATGTTGGGGCGTGACTTAGAAGCTCTGATACAAAGAGCCCGGGAC
TTCAAGAAAGAGTACGGCGATTCATATGTCTCAGTTGAGCATCTAGTCCTTGGCTTTGCT
GAAGATAAGCGGTTTGGGAAACAGCTGTTCAAGGATTTTCAGATTACTGTGAAGACGTTG
AAATCAGCCATTGAATCGATTAGAGGGAAGCAAAATGTAATCGATCAAGATCCTGAGGGA
AAGTACGAAGCTTTGGAGAAATATGGAAAGGATCTGACAGCTATGGCACGTCAAGGGAAG
CTTGATCCAGTTATTGGAAGAGATGATGAGATTCGAAGATGTATACAGATTTTATCACGA
AGAACAAAGAACAATCCAGTTCTGATTGGTGAACCTGGTGTAGGGAAAACAGCTATAGCT
GAAGGGTTAGCTCAGAGGATCGTTCAAGGAGATGTCCCACAAGCTCTGACAAACCGTCGA
CTAATTGCACTTGATATGGGTGCATTGATTGCTGGTGCAAAATATCGTGGAGAGTTCGAG
GATAGACTCAAGGCTGTTCTCAAAGAAGTTACAGATTCTGATGGGCAGACCGTTCTTTTC
ATTGATGAGATTCACACAGTTGTCGGAGCAGGTGCCACAAATGGTGCAATGGATGCTGGT
AATCTTCTCAAACCAATGCTTGGGAGAGGAGAACTACGGTGTATTGGTGCAACAACCCTT
GATGAATACCGCAAATATATTGAGAAAGATCCAGCACTGGAGCGGCGCTTCCAACAAGTT
TTTGTTGATCAACCTTCAGTTGAAGATACAATTTCAATACTCCGAGGGCTAAGAGAGAGA
TATGAGTTGCACCATGGTGTACGAATATCTGACAGTGCCCTTGTAGCTGCAGCTGTTCTT
TCAGATCGCTATATCAGTGGACGATTCTTGCCTGACAAAGCAATTGATCTGGTTGATGAA
TCAGCTGCCAAGTTAAAAATGGAGATAACATCAAAACCTACTGCTCTGGATGAGATTGAT
CGTGCTGTCTTGAAGCTTGAGATGGAGCGTCTCTCACTTACAAATGATACAGACAAAGCA
TCAAGGGACAGACTGTCCCGTCTTGAAGCAGAACTATCACTCTTGAAGGATAAACAACGT
CAATTGACTGAGCAGTGGGAGCATGAGAAAGCAGTAATGACTAAAATTCAATCTATCAAA
GAAGAGATTGACAGGGTAAATGTGGAGATACAGCAGGCAGAACGTGAGTACGACCTTAAT
CGTGCTGCTGAACTGAAATATGGCAGTCTGAATGCCTTGCAGCGCCAGCTTCAAGCGACA
GAGAAGGAGCTTGATGAATATCAGAGTTCTGGGAAATCCATGCTAAGGGAAGAGGTGACC
CAAGATGATATTGCAGAAATAGTGAGCAGGTGGACAGGAATTCCAGTTTCTAAACTAAAG
CAATCTGATAGGGAGAAATTGTTGTATCTGGAGGATGAGCTGCACAAGCGAGTTGTCGGT
CAGGATCCTGCTGTAAAAGCAGTTGCAGAGGCCATTCAGAGATCCAGGGCTGGATTATCC
GACCCAAACCGTCCCATTGCTAGTTTCATGTTCATGGGACCTACAGGAGTTGGCAAAACA
GAGTTAGCGAAAGCCCTTGCAGCTTTTATGTTCAACACTGAGGAAGCTGTTGTCAGGATT
GACATGAGCGAGTACATGGAGAAGCATTCAGTCTCAAGATTGATTGGTGCTCCACCAGGT
TATGTTGGGTATGAAGAGGGTGGTCAACTAACAGAAGCTGTTCGTCGTAGGCCATATTCC
GTCGTCTTGTTTGATGAGATCGAGAAAGCTCATTCGGATGTGTTCAATGTCTTCCTTCAA
ATACTGGACGACGGTAGGGTTACCGACTCTCAAGGACGGAAAGTGAGCTTCACCAACACC
ATAATTATCATGACGTCCAACGTTGGGTCGCAGTATATACTAAACATGGACGAAGAAGTT
GGATCATCTGATTCAGCCTATGAGAACATAAAGAGGAGGGTGATGGATGCTGCAAGATCT
GTGTTCCGTCCAGAGTTCATGAATCGTGTAGATGAGTATATTGTCTTCAAGCCTCTCGAG
AGAGAACAGATCAACAGCATTGTCAAATTACAGCTCGCAAGAGTACAGAAGAGGATCGCA
GACCGCAAAATCAAGCTGGAAGTCTCACCCGGTGCTATTGAATTCTTGGGAAGCCTGGGG
TATGACCCGAACTATGGCGCGAGGCCGGTGAAGAGAGTGATTCAACAGCACGTGGAGAAC
GAACTCGCGAAGGGCATCCTCAGAGGTGATTTCAAGGACGAGGACAGCATCTTTGTGGAC
ACCCAGGTCACGGTGCCCTCTAACGGCCAGCTTCCGCAACAGAAGCTAGTTTTCCGGAAA
GTGGGTGAGCAATCGAAGCCCGCTGCTGAAGGCGAGAAGTTCTTGCCGGCTGTCTGA

Peptide Sequence

PEP ID

Zm00001d029557_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:76065155:76078721:1 gene:Zm00001d029557 transcript:Zm00001d029557_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperone protein ClpB3 chloroplastic
Sequence

MAAAPPLSADALSFLTSAPAAAAAVPTPVVAAAWGAARAGHVRGKAGLRTTGGGRGGVLA
PVVGKRLCRTPLSVRCNATSRDGRITQQEFTEMAWQAIVSSPEVAKESKHQIVETEHMMK
SLLEQRNGLARRIFSKAGVDNTRLLDATEKFIQRQPKVLGEEPGSMLGRDLEALIQRARD
FKKEYGDSYVSVEHLVLGFAEDKRFGKQLFKDFQITVKTLKSAIESIRGKQNVIDQDPEG
KYEALEKYGKDLTAMARQGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAIA
EGLAQRIVQGDVPQALTNRRLIALDMGALIAGAKYRGEFEDRLKAVLKEVTDSDGQTVLF
IDEIHTVVGAGATNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQV
FVDQPSVEDTISILRGLRERYELHHGVRISDSALVAAAVLSDRYISGRFLPDKAIDLVDE
SAAKLKMEITSKPTALDEIDRAVLKLEMERLSLTNDTDKASRDRLSRLEAELSLLKDKQR
QLTEQWEHEKAVMTKIQSIKEEIDRVNVEIQQAEREYDLNRAAELKYGSLNALQRQLQAT
EKELDEYQSSGKSMLREEVTQDDIAEIVSRWTGIPVSKLKQSDREKLLYLEDELHKRVVG
QDPAVKAVAEAIQRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALAAFMFNTEEAVVRI
DMSEYMEKHSVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVVLFDEIEKAHSDVFNVFLQ
ILDDGRVTDSQGRKVSFTNTIIIMTSNVGSQYILNMDEEVGSSDSAYENIKRRVMDAARS
VFRPEFMNRVDEYIVFKPLEREQINSIVKLQLARVQKRIADRKIKLEVSPGAIEFLGSLG
YDPNYGARPVKRVIQQHVENELAKGILRGDFKDEDSIFVDTQVTVPSNGQLPQQKLVFRK
VGEQSKPAAEGEKFLPAV

Transcript Sequence

Transcript ID

Zm00001d029557_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:76065155:76078721:1 gene:Zm00001d029557 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperone protein ClpB3 chloroplastic
Sequence

CTTCCTTTCCCTATCGTCTTCCTCCCCTTCTCCACTCCACGGAAGTGCTCGTTGGCACCT
GAACCTCCCAGAACCTCCTCCTCCGCTTGTCTCCACCCTCCACGCCGCCACCGATTTATA
CACGCTTCGTCCCGCCCCGCCGCGACCTTCTGTTCCATACCATGCCATACCATTTCTCCT
GATAAACCATCCAATCCAGAGTTCCATTCCAGTCTGAATTGCTCCTCCTACCTTCTGATA
AGCAATCACGATTGTGCCATCAACACTACAGCGCCCCACCATGGCCGCCGCGCCGCCTCT
GTCCGCCGACGCACTTTCCTTCCTAACCTCCGCCCCCGCCGCGGCCGCGGCCGTGCCGAC
GCCGGTCGTAGCCGCGGCGTGGGGCGCGGCGAGGGCGGGTCATGTGAGGGGTAAGGCGGG
ACTAAGGACGACGGGAGGAGGAAGGGGCGGGGTACTGGCTCCGGTGGTCGGGAAGAGGCT
CTGCCGGACGCCGCTCTCCGTTCGCTGCAACGCCACCAGCCGGGACGGCAGGATTACACA
ACAAGAGTTCACTGAGATGGCGTGGCAAGCAATTGTCTCATCCCCTGAGGTGGCGAAGGA
GAGCAAGCACCAGATTGTGGAGACTGAGCATATGATGAAATCCCTGCTGGAGCAACGGAA
TGGCCTTGCCCGCCGCATTTTTTCTAAGGCAGGAGTTGATAATACAAGGCTTCTTGATGC
CACGGAGAAGTTCATCCAGAGACAGCCTAAGGTATTAGGTGAAGAACCTGGATCTATGTT
GGGGCGTGACTTAGAAGCTCTGATACAAAGAGCCCGGGACTTCAAGAAAGAGTACGGCGA
TTCATATGTCTCAGTTGAGCATCTAGTCCTTGGCTTTGCTGAAGATAAGCGGTTTGGGAA
ACAGCTGTTCAAGGATTTTCAGATTACTGTGAAGACGTTGAAATCAGCCATTGAATCGAT
TAGAGGGAAGCAAAATGTAATCGATCAAGATCCTGAGGGAAAGTACGAAGCTTTGGAGAA
ATATGGAAAGGATCTGACAGCTATGGCACGTCAAGGGAAGCTTGATCCAGTTATTGGAAG
AGATGATGAGATTCGAAGATGTATACAGATTTTATCACGAAGAACAAAGAACAATCCAGT
TCTGATTGGTGAACCTGGTGTAGGGAAAACAGCTATAGCTGAAGGGTTAGCTCAGAGGAT
CGTTCAAGGAGATGTCCCACAAGCTCTGACAAACCGTCGACTAATTGCACTTGATATGGG
TGCATTGATTGCTGGTGCAAAATATCGTGGAGAGTTCGAGGATAGACTCAAGGCTGTTCT
CAAAGAAGTTACAGATTCTGATGGGCAGACCGTTCTTTTCATTGATGAGATTCACACAGT
TGTCGGAGCAGGTGCCACAAATGGTGCAATGGATGCTGGTAATCTTCTCAAACCAATGCT
TGGGAGAGGAGAACTACGGTGTATTGGTGCAACAACCCTTGATGAATACCGCAAATATAT
TGAGAAAGATCCAGCACTGGAGCGGCGCTTCCAACAAGTTTTTGTTGATCAACCTTCAGT
TGAAGATACAATTTCAATACTCCGAGGGCTAAGAGAGAGATATGAGTTGCACCATGGTGT
ACGAATATCTGACAGTGCCCTTGTAGCTGCAGCTGTTCTTTCAGATCGCTATATCAGTGG
ACGATTCTTGCCTGACAAAGCAATTGATCTGGTTGATGAATCAGCTGCCAAGTTAAAAAT
GGAGATAACATCAAAACCTACTGCTCTGGATGAGATTGATCGTGCTGTCTTGAAGCTTGA
GATGGAGCGTCTCTCACTTACAAATGATACAGACAAAGCATCAAGGGACAGACTGTCCCG
TCTTGAAGCAGAACTATCACTCTTGAAGGATAAACAACGTCAATTGACTGAGCAGTGGGA
GCATGAGAAAGCAGTAATGACTAAAATTCAATCTATCAAAGAAGAGATTGACAGGGTAAA
TGTGGAGATACAGCAGGCAGAACGTGAGTACGACCTTAATCGTGCTGCTGAACTGAAATA
TGGCAGTCTGAATGCCTTGCAGCGCCAGCTTCAAGCGACAGAGAAGGAGCTTGATGAATA
TCAGAGTTCTGGGAAATCCATGCTAAGGGAAGAGGTGACCCAAGATGATATTGCAGAAAT
AGTGAGCAGGTGGACAGGAATTCCAGTTTCTAAACTAAAGCAATCTGATAGGGAGAAATT
GTTGTATCTGGAGGATGAGCTGCACAAGCGAGTTGTCGGTCAGGATCCTGCTGTAAAAGC
AGTTGCAGAGGCCATTCAGAGATCCAGGGCTGGATTATCCGACCCAAACCGTCCCATTGC
TAGTTTCATGTTCATGGGACCTACAGGAGTTGGCAAAACAGAGTTAGCGAAAGCCCTTGC
AGCTTTTATGTTCAACACTGAGGAAGCTGTTGTCAGGATTGACATGAGCGAGTACATGGA
GAAGCATTCAGTCTCAAGATTGATTGGTGCTCCACCAGGTTATGTTGGGTATGAAGAGGG
TGGTCAACTAACAGAAGCTGTTCGTCGTAGGCCATATTCCGTCGTCTTGTTTGATGAGAT
CGAGAAAGCTCATTCGGATGTGTTCAATGTCTTCCTTCAAATACTGGACGACGGTAGGGT
TACCGACTCTCAAGGACGGAAAGTGAGCTTCACCAACACCATAATTATCATGACGTCCAA
CGTTGGGTCGCAGTATATACTAAACATGGACGAAGAAGTTGGATCATCTGATTCAGCCTA
TGAGAACATAAAGAGGAGGGTGATGGATGCTGCAAGATCTGTGTTCCGTCCAGAGTTCAT
GAATCGTGTAGATGAGTATATTGTCTTCAAGCCTCTCGAGAGAGAACAGATCAACAGCAT
TGTCAAATTACAGCTCGCAAGAGTACAGAAGAGGATCGCAGACCGCAAAATCAAGCTGGA
AGTCTCACCCGGTGCTATTGAATTCTTGGGAAGCCTGGGGTATGACCCGAACTATGGCGC
GAGGCCGGTGAAGAGAGTGATTCAACAGCACGTGGAGAACGAACTCGCGAAGGGCATCCT
CAGAGGTGATTTCAAGGACGAGGACAGCATCTTTGTGGACACCCAGGTCACGGTGCCCTC
TAACGGCCAGCTTCCGCAACAGAAGCTAGTTTTCCGGAAAGTGGGTGAGCAATCGAAGCC
CGCTGCTGAAGGCGAGAAGTTCTTGCCGGCTGTCTGATGGAGCACGGTTGCAGTTCTACA
GATCGTGAGCAATAAAATGTACATATAAAGGTGCCAAACTGGTAGAGTACTCCGTTTGGC
TTAGTAGAGCATCACAGCCAGAATTTGTTCTATGGTACAGCTCAGTTTACATGGAGCAGC
GAATTTTGTTTTGTTTCTGCCATTTTTCTTTTCAGTGGAAGTGGTATCCACAAGTCTCCT
GTCCTCATCAGGGATAAAACTCATATTTTCTCTTTTTCCTTGAATGTATTGTTTGTAGCA
CCTAGAGAAGATAATATTCCCGGATGCTGTTAAGACATATTTAAGGATGCCGATAAACAA
AAGGAGGTTTTGTTCGATT