Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029446_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:70972486:70974851:-1 gene:Zm00001d029446 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	ATGAGGAACCACCACAAGCTAGCTCCTACCACCCCTTCCTCCTCAAAGAACAACCACAGC AGCAACAAGGCGGAGCAGCCACACCTCTCGGGAGCTTACATTAGGAGCCTCGTGAAGCAG CTCAGCTCCTCAGCTGCAGCAAGATCCAAAGACCACAGCACCATGGTGGGCACCAAGCCA CATAGCCACCAGCCGCCGCCACAAGAAGACGCCCTCTTGCAGCAGCAGCAGCAGGCCCAA ACAGCACCACCACAGCAGCAGCAGCAGCAGCCACACAAGAAGCAGGTGAGGAGGAGGCTG CACACAAGCAGGCCGTACCAGGAGAGACTGCTCAACATGGCAGAGGCAAGGAGAGAGATT GTCACCGCTCTCAAGATCCATAGGGCCTCCATGAGACAAGCCAAAGAGCTGCAGCAGCAG CAGCAACAACAACAGCTGATGCATCTGCAGCTGCAGCGACAACAGGAGGTTCATCATCAT CCAGCGCAAGAGCCAAGCCAAGCAGCAACCGGAGCTTCGTCGTCTGCGCCGAGCTACGCT TCCTACTCAGATTACCTGTACAACTCTCCATTTTCGCATTTCACTGCCCCTACTCCCAGT AGCTACTCTTCGTCGTCCCCACTGATGATCACTTACGACGACGCACCAGTCGCGCCGCCG CCCATGGTCGTCAGTTCTGAGCATAACCTAGATGACCAGCTGCTCCCTGCTCTCCCCTTG CAGCCTCTAGGTCTAAACCTTAGCTTCCAGGGATTCAATAGTTGTAGCTCCGCCGTCGCC GGTGACGACACCAAGCAGAACAGCACCTGCTCTTTCGATCCTCCGTTGCTCCAACCGTCA CCAGGTTCCTCCTATTCGGTCTACTCCTCTCCCCCGGTGACGATGGCGAGCCACGACCTG TCCGCTGTCGCCATGGAGAACACCTCACTGGCAGCAGCAGACGCGTCGCTGCACCGGGTG CTTGACGACGAGGAGATGGCGGCTATCTACTCGATCGGGCAGCAGCACGACATTGAGTGG AGCGATACCATGAGCCTGGTCACGTCAGCGTGGTGGAGCAAGCTCCTTGAGAGCATCGAA GACAAGGGCAACGGGACAGCAGCCGATCAGGAGGCCGGTGGAGGTGCTGCCAGTGCCAAC ATGGTGATGATGATGGAGGATCCGTCGTCGTCGTTGGTGGACATGCCCGATTGGGCCAGC GATAACCTTGGCCATGAGGCTACCCATGAAAGCAACTCTAGTTTTCCCGGGATACATTTG AATGACTACTACTACCATCAGGACGAAGATGTCTCCTTGCCCTTGCCCCGCATGGACATT GGAGATATCGAAGGATGGGATACAGAATGGTTCTCTTGA

Peptide Sequence

PEP ID	Zm00001d029446_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:70972486:70974851:-1 gene:Zm00001d029446 transcript:Zm00001d029446_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	MRNHHKLAPTTPSSSKNNHSSNKAEQPHLSGAYIRSLVKQLSSSAAARSKDHSTMVGTKP HSHQPPPQEDALLQQQQQAQTAPPQQQQQQPHKKQVRRRLHTSRPYQERLLNMAEARREI VTALKIHRASMRQAKELQQQQQQQQLMHLQLQRQQEVHHHPAQEPSQAATGASSSAPSYA SYSDYLYNSPFSHFTAPTPSSYSSSSPLMITYDDAPVAPPPMVVSSEHNLDDQLLPALPL QPLGLNLSFQGFNSCSSAVAGDDTKQNSTCSFDPPLLQPSPGSSYSVYSSPPVTMASHDL SAVAMENTSLAAADASLHRVLDDEEMAAIYSIGQQHDIEWSDTMSLVTSAWWSKLLESIE DKGNGTAADQEAGGGAASANMVMMMEDPSSSLVDMPDWASDNLGHEATHESNSSFPGIHL NDYYYHQDEDVSLPLPRMDIGDIEGWDTEWFS

Transcript Sequence

Transcript ID	Zm00001d029446_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:70972486:70974851:-1 gene:Zm00001d029446 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	ACATCCCTCGTTTCCTTAGCGAGAAAGAGAACCTGATCGATCCGTCGCTATAGCATAGAG AGAGAGAGAGAGAGAGAGAGAGAGATAGATAGATAGAGAGAGATGAGGAACCACCACAAG CTAGCTCCTACCACCCCTTCCTCCTCAAAGAACAACCACAGCAGCAACAAGGCGGAGCAG CCACACCTCTCGGGAGCTTACATTAGGAGCCTCGTGAAGCAGCTCAGCTCCTCAGCTGCA GCAAGATCCAAAGACCACAGCACCATGGTGGGCACCAAGCCACATAGCCACCAGCCGCCG CCACAAGAAGACGCCCTCTTGCAGCAGCAGCAGCAGGCCCAAACAGCACCACCACAGCAG CAGCAGCAGCAGCCACACAAGAAGCAGGTGAGGAGGAGGCTGCACACAAGCAGGCCGTAC CAGGAGAGACTGCTCAACATGGCAGAGGCAAGGAGAGAGATTGTCACCGCTCTCAAGATC CATAGGGCCTCCATGAGACAAGCCAAAGAGCTGCAGCAGCAGCAGCAACAACAACAGCTG ATGCATCTGCAGCTGCAGCGACAACAGGAGGTTCATCATCATCCAGCGCAAGAGCCAAGC CAAGCAGCAACCGGAGCTTCGTCGTCTGCGCCGAGCTACGCTTCCTACTCAGATTACCTG TACAACTCTCCATTTTCGCATTTCACTGCCCCTACTCCCAGTAGCTACTCTTCGTCGTCC CCACTGATGATCACTTACGACGACGCACCAGTCGCGCCGCCGCCCATGGTCGTCAGTTCT GAGCATAACCTAGATGACCAGCTGCTCCCTGCTCTCCCCTTGCAGCCTCTAGGTCTAAAC CTTAGCTTCCAGGGATTCAATAGTTGTAGCTCCGCCGTCGCCGGTGACGACACCAAGCAG AACAGCACCTGCTCTTTCGATCCTCCGTTGCTCCAACCGTCACCAGGTTCCTCCTATTCG GTCTACTCCTCTCCCCCGGTGACGATGGCGAGCCACGACCTGTCCGCTGTCGCCATGGAG AACACCTCACTGGCAGCAGCAGACGCGTCGCTGCACCGGGTGCTTGACGACGAGGAGATG GCGGCTATCTACTCGATCGGGCAGCAGCACGACATTGAGTGGAGCGATACCATGAGCCTG GTCACGTCAGCGTGGTGGAGCAAGCTCCTTGAGAGCATCGAAGACAAGGGCAACGGGACA GCAGCCGATCAGGAGGCCGGTGGAGGTGCTGCCAGTGCCAACATGGTGATGATGATGGAG GATCCGTCGTCGTCGTTGGTGGACATGCCCGATTGGGCCAGCGATAACCTTGGCCATGAG GCTACCCATGAAAGCAACTCTAGTTTTCCCGGGATACATTTGAATGACTACTACTACCAT CAGGACGAAGATGTCTCCTTGCCCTTGCCCCGCATGGACATTGGAGATATCGAAGGATGG GATACAGAATGGTTCTCTTGACTGTAATCGATGATCTGTCATATATGGGAAGCAATTTAT CGAAGTTTTGAGCAAAATTGCTGCCTCTTGACATGCTTTTGTTGTATCTCCAAAAAATAA AGGTGTCCACTAGTAGTGATATATTGAAATGGCAAAGATTTGATCTCAAGGATTGTTTAT TAACTAATCAAGGCGTTGAACATCGTTAGTCTAAGCATGTCTCTTGATGGAATATCAACC TTTTATTTCTTTGCGACATCCATGTTGATGTATGTACTTATTAGTGTTATCTATGCTAAT CAACAGTTG