Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029432_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:1:70228001:70231727:1 gene:Zm00001d029432 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar cation/proton exchanger 2
Sequence	ATGATGGTGGCGGAGAAGCCGGCGCCGGGGGTGTTCCAGGTGCACGAGGCGGCGGACGAC GAGCAGGAGCCGGCGTCGCCGTCGTCGCCACGGAAGATGCACTCGCTGGACTTCGAGCAC ATCGGCGCGCTCGCCGCCGTGGCCGAGTCGCTGGCGCCCGGGAGCAGGTGGCGGAGAGCG CTCACCAGCGCGCGCTTCGTCATCTTCCAGGCCAAGATCAACGTGCTGCTCCCCTTCGGC CCGCTCGCCATCGTGCTCCACTATCTCTCCGGAACGCACCAAGGATGGGTTTTCCTTTTC AGCTTAATCGGCATTACCCCGTTGGCCGAGAGACTGGGATACGCGACCGAGCAACTTGCT TGCTACACTGGCCCAACAGTTGGGGGGCTACTGAATGCTACATTTGGAAATGCAACGGAA ATGATTATATCAATATACGCACTGAAAAATGGGATGATTCGAGTCGTCCAGCAGTCACTA CTAGGCTCAATACTGTCAAATATGCTGCTGGTTCTTGGCTGTGCTTTCTTTGCCGGCGGT CTTGTCCACTCCGACAGGGATCAGGTCTTCAACAAGGCATCAGCTGTTGTAAACTCAGGA CTACTGTTGATGGCTGTCTTAGGCCTTATGTTCCCAGCAGTGCTTCACTTCACGCATTCA GAAGCGCAGTATGGAAAATCCGAAGTAGCTCTTTCAAGGTTTAGTAGCTGCATCATGCTT GTGGCCTATGCTAGCTATCTGTTTTTTCAACTGAAGAGCCACCGCAGTATGTACAGCCCA ATTGGTGATGAAGAAGAAGCCACTGAGGAGGATGAGGATGAAAAGGAGATAACACAATGG GAGGCCATCTGCTGGCTTTTTATGTTGACTATTTGGATTTCAATACTCTCAGGGTACCTG GTTGATGCCATTCAGGGTGCGTCCGAATCATTAAACTTGCCAGTAGCCTTTATTAGTGTT ATTCTGCTTCCTATTGTGGGGAATGCTGCTGAACATGCGAGCGCCATTATGTTTGCCATG AAGAACAAATTGGACATTACATTGGGAGTTGCAATAGGTTCATCAACACAGATCTCCATG TTTGTGATTCCATTCTGCGTGGTAATTGGCTGGATGATGGGGCGGGAAATGGACTTGAAT TTTCAATTGTTTGAGACAGCGACTCTCTTTATAACTGTACTAGTGGTGGCATTCATGCTA CAGGAAGGCACATCAAACTATTTTAAAGGCCTTATGCTCATCTTGTGCTACCTCATAGTC GCTGCAAGCTTCTTCGTCCATGTTGATCCTGATGCAAGTGAGAACTAG

Peptide Sequence

PEP ID	Zm00001d029432_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:1:70228001:70231727:1 gene:Zm00001d029432 transcript:Zm00001d029432_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar cation/proton exchanger 2
Sequence	MMVAEKPAPGVFQVHEAADDEQEPASPSSPRKMHSLDFEHIGALAAVAESLAPGSRWRRA LTSARFVIFQAKINVLLPFGPLAIVLHYLSGTHQGWVFLFSLIGITPLAERLGYATEQLA CYTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFAGG LVHSDRDQVFNKASAVVNSGLLLMAVLGLMFPAVLHFTHSEAQYGKSEVALSRFSSCIML VAYASYLFFQLKSHRSMYSPIGDEEEATEEDEDEKEITQWEAICWLFMLTIWISILSGYL VDAIQGASESLNLPVAFISVILLPIVGNAAEHASAIMFAMKNKLDITLGVAIGSSTQISM FVIPFCVVIGWMMGREMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIV AASFFVHVDPDASEN

Transcript Sequence

Transcript ID	Zm00001d029432_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:70228001:70231727:1 gene:Zm00001d029432 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar cation/proton exchanger 2
Sequence	TGCCGTGCCCGTGCCCGTGCCCGTGCCCGGCGCATCGGCGTCTCCTCTCCTCGCGCATTT CTCACTCGACCACCACTTCGGCACCGCAGCGTCCGAATCCCTCCGAACCCCGACCCAAGC GCGCTGTCCGGCGGTCCTCATCGAACCCGCCCTGATCCCTAGCGCTCGCGTGCTCCACTC TACCTACGGAGGGAGCCCGCCCAGCCGGCCGCCTCTGCGTTGGTCCTGGCCGCGGCCTCG CACGCAGATGATGGTGGCGGAGAAGCCGGCGCCGGGGGTGTTCCAGGTGCACGAGGCGGC GGACGACGAGCAGGAGCCGGCGTCGCCGTCGTCGCCACGGAAGATGCACTCGCTGGACTT CGAGCACATCGGCGCGCTCGCCGCCGTGGCCGAGTCGCTGGCGCCCGGGAGCAGGTGGCG GAGAGCGCTCACCAGCGCGCGCTTCGTCATCTTCCAGGCCAAGATCAACGTGCTGCTCCC CTTCGGCCCGCTCGCCATCGTGCTCCACTATCTCTCCGGAACGCACCAAGGATGGGTTTT CCTTTTCAGCTTAATCGGCATTACCCCGTTGGCCGAGAGACTGGGATACGCGACCGAGCA ACTTGCTTGCTACACTGGCCCAACAGTTGGGGGGCTACTGAATGCTACATTTGGAAATGC AACGGAAATGATTATATCAATATACGCACTGAAAAATGGGATGATTCGAGTCGTCCAGCA GTCACTACTAGGCTCAATACTGTCAAATATGCTGCTGGTTCTTGGCTGTGCTTTCTTTGC CGGCGGTCTTGTCCACTCCGACAGGGATCAGGTCTTCAACAAGGCATCAGCTGTTGTAAA CTCAGGACTACTGTTGATGGCTGTCTTAGGCCTTATGTTCCCAGCAGTGCTTCACTTCAC GCATTCAGAAGCGCAGTATGGAAAATCCGAAGTAGCTCTTTCAAGGTTTAGTAGCTGCAT CATGCTTGTGGCCTATGCTAGCTATCTGTTTTTTCAACTGAAGAGCCACCGCAGTATGTA CAGCCCAATTGGTGATGAAGAAGAAGCCACTGAGGAGGATGAGGATGAAAAGGAGATAAC ACAATGGGAGGCCATCTGCTGGCTTTTTATGTTGACTATTTGGATTTCAATACTCTCAGG GTACCTGGTTGATGCCATTCAGGGTGCGTCCGAATCATTAAACTTGCCAGTAGCCTTTAT TAGTGTTATTCTGCTTCCTATTGTGGGGAATGCTGCTGAACATGCGAGCGCCATTATGTT TGCCATGAAGAACAAATTGGACATTACATTGGGAGTTGCAATAGGTTCATCAACACAGAT CTCCATGTTTGTGATTCCATTCTGCGTGGTAATTGGCTGGATGATGGGGCGGGAAATGGA CTTGAATTTTCAATTGTTTGAGACAGCGACTCTCTTTATAACTGTACTAGTGGTGGCATT CATGCTACAGGAAGGCACATCAAACTATTTTAAAGGCCTTATGCTCATCTTGTGCTACCT CATAGTCGCTGCAAGCTTCTTCGTCCATGTTGATCCTGATGCAAGTGAGAACTAGGTGAA AAATCTGCAATACAGCATACCTGTGAACAGAATGGAGGGGCTACGACCTAACTGCAGAGT TAGCAAATTGCGTAGATGAGGTTCTGCAAGAGTCCTGAATTTGGATGTAACTTGTTGGCA GAATCCCGGACCGAGGGTTTAACTCGGGCTCTCAAGATTAAGGAGCTGATGCAGCTTTTT TTAGGATAGCAACAGCATCGCCCGTTGAGGAACTGTAACTTTATGCGGCGATCACAGAAT TTACCGTTGCATTTGTTCACAGTTTTTGATGTTGCTGTGATGTTACGGTGTTACCGTTGG TTGGTACGATGATGTTAGA