Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029415_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:69604756:69609617:-1 gene:Zm00001d029415 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-isopropylmalate synthase 1 chloroplastic
Sequence	ATGACCTCGAAGGGGCACGCTGCGTCACTCCTGCGTCCTCTCCGGAGCCGACCTGAACGC CGACGTCGCCCGTCCCATCTCCCTCTCTCTAGGAGGACACCTCGGTGGCCAACACGAGCT GCCCTTCTCCAGCTCTGCCCCCTAGTACGCGCCGATGTCGAGTTCAGACCTGAGGATGCC GACATGTCAAATCGAGAATTCTTGTACCATATACTGGAGGAAGTCATAAAAGTTGGGGCA ACCACTCTTAATATCCCAGACACTGTCGAATACACTCTTCCTTATGAATTTGGGAAGTTA ATTTCTGACATAAAGGAAAACACTCTTAGAATTGAAAATGCCATCATTTCCACTCATTGC CAGAATGGCCTTGGCCTTGCAACTGCCAACACATTAGCGGGTGCTCATACAGGAGCGCGA CTGTTAGAGGTGACTATTAATGGTATTGGTGAAAGAGCTGGAAATGCTTCATTGGAAGAG GTTGTCATGGCAATTAAATGTCGTCAGGAGCTCTTAGATGGTCTATATACGGGAATAAAT TCCCAACATATTACTTTGACAAGCAAAATGGTACAAGAGCACAATGGACTTCATGTACAA CCACATGAAGCTATTGTTGGTGCCAATGCCTTTGCCCATGAAAGTGGAATTCATCAGGAT GGAATGCTTAAATATAAAGGAACATATGAAATAATATCCTGA

Peptide Sequence

PEP ID	Zm00001d029415_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:69604756:69609617:-1 gene:Zm00001d029415 transcript:Zm00001d029415_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-isopropylmalate synthase 1 chloroplastic
Sequence	MTSKGHAASLLRPLRSRPERRRRPSHLPLSRRTPRWPTRAALLQLCPLVRADVEFRPEDA DMSNREFLYHILEEVIKVGATTLNIPDTVEYTLPYEFGKLISDIKENTLRIENAIISTHC QNGLGLATANTLAGAHTGARLLEVTINGIGERAGNASLEEVVMAIKCRQELLDGLYTGIN SQHITLTSKMVQEHNGLHVQPHEAIVGANAFAHESGIHQDGMLKYKGTYEIIS

Transcript Sequence

Transcript ID	Zm00001d029415_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:69604756:69609617:-1 gene:Zm00001d029415 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-isopropylmalate synthase 1 chloroplastic
Sequence	CTGCACCCTTCAATCAGCCGCACGCCATGCCCCCGCCTGCCCCGCCCCCGCGACACCCTA GCCTCCAAACCTCGTCCGCTCCTCACGAGATTCCCACCCCCCTTACGTTCTCTCCCCACG CCGCCATCTGCACGGCTCTGGCATCCTATGCTGGTCTCCTCCAGCCTCGCGGGCTCCTCT ACCCCAACCCTCACCACAGCGTCGCACGATGACCTCGAAGGGGCACGCTGCGTCACTCCT GCGTCCTCTCCGGAGCCGACCTGAACGCCGACGTCGCCCGTCCCATCTCCCTCTCTCTAG GAGGACACCTCGGTGGCCAACACGAGCTGCCCTTCTCCAGCTCTGCCCCCTAGTACGCGC CGATGTCGAGTTCAGACCTGAGGATGCCGACATGTCAAATCGAGAATTCTTGTACCATAT ACTGGAGGAAGTCATAAAAGTTGGGGCAACCACTCTTAATATCCCAGACACTGTCGAATA CACTCTTCCTTATGAATTTGGGAAGTTAATTTCTGACATAAAGGAAAACACTCTTAGAAT TGAAAATGCCATCATTTCCACTCATTGCCAGAATGGCCTTGGCCTTGCAACTGCCAACAC ATTAGCGGGTGCTCATACAGGAGCGCGACTGTTAGAGGTGACTATTAATGGTATTGGTGA AAGAGCTGGAAATGCTTCATTGGAAGAGGTTGTCATGGCAATTAAATGTCGTCAGGAGCT CTTAGATGGTCTATATACGGGAATAAATTCCCAACATATTACTTTGACAAGCAAAATGGT ACAAGAGCACAATGGACTTCATGTACAACCACATGAAGCTATTGTTGGTGCCAATGCCTT TGCCCATGAAAGTGGAATTCATCAGGATGGAATGCTTAAATATAAAGGAACATATGAAAT AATATCCTGATGATATTGGTTTAACACGTGCAAATTAATTTGGTATTGTTCTTGGGAAAC TCAGGTATTATGCAACCTACCCATACCCTCTTGATTTAGACTTCATTTTCTCCAATATTC TACTGTGATGTCTCTCAATTAGATTTCTCTTACCGACTTTCTACTTTTTACTTTTGTTTG ATGGCATGCATCCTCTAACTAAAGAGCCATAAATGTTAGATTTGAATGCTATGTATTTGG CTACAAAATAGGTATTAACTGTTGGCGATGTTCCTATTGGTAGTGTTACAAAAGTATTGG TAGTAGGGTAATGATGTAAATCATTACACTTAAGTCATGTCACAGGCATATAGCCTCTGA TTCAGTAATTATGCAATGATATGCTATATAGGATTGGAAACGAGCTGAGCGGCTCCGCTC GGTGCGACTCGATGGCTGATCGAGATCGGTTTGGCTCGTCCATTGCACGAGCTCAAGAAT GAAGCTCGGTTCGGCTCGAAGTGGGCTCGCGAGCCGTACCCTGGTAAATATTATTGTATT ATAGAATAATAAATTAAAATATATCAATGTGAAATATAAAATCACCCTTCAATATTATGA GTAATCTCTACTACTACTTAAGTGTCATAAATGTTTGACATACCATAATTTGTTGATTTT GGGGACTAGAAGGGTATAGACCTCTACTACTTGCGAAGTCAGCAAACAATGTAGTCGTCT AGGGCAGCTTCTCAAGCAATTCCCCAGGGATCTCTTGCCTCTCAAGAGAGCCCATCTCAT CTGCTTCGATATGGGAAAGCCAGATTTGTCCCTAAAATTCGTTCAAGTAAGCCAAATGGG GTTCCTATGTATTTATGGGCTTCAAATTTTGAGCTTGACTGAAGGAAGTTGAAGCCGATG TGGCATTTCTTTTTCGCTTGAGGTACTTGTGTTGATTCTTCCCAAGGAATATCAATAATG TCATCTTTGTATCAAAGGTAAGATCCAAATTGCTGAGAGTATTATATGTCAATTGTTCCA TAACTGCACGATTGTCTCTTGTTAAAGAAATAATGTCTATTTGTGTTCCTTTTCATCGTT TCCTGTGAACATTTTTATTGTGCCAAATTGGTGCATTGCAAAAGCTTGCGAATGTACCAA TAATATTTTTTTTATCAACCCAGCACCCTGCCACCCGCTTTTATCAGGCTCTTTTGTTCA CTGGATTTGTGGTACTCATTGCTTATGATGTTTTGCTAAAGAATCCTGATCAGAATTTCA TATATGGCAATGCTTGCCTTCCATTTGCTTGAGCTTGGACGGATATATGAAGCTGAGAGA GCTGCTCAATAAAAATGACTTCTGGTCACAGCATAATGTATGTCCTTGATGTGGTTGTAG TTAGTTTCAGTTGTGAAAAGCATATCATAGCAGCCTTTGAGCAGATTAAGTCTTTAACGA CCAGTCAGGCACCAATGCTAATTGTTTCTAGGTTCTTGAGGATGGGGTTGTGTGATTTTA CCTATCTATCGTGTTGCTTTAGAAGTAGATGTGATTGTGTTTACTTCAAGAATGTTCATA CAATGTAGTAACTTATTCTTACATGATCAAATGTTTACAGCTGACTGTACTAGAAGGTTC CTTTTGCAACCTCAATTTGAGATTTAAGGGAGGATTACCACCAGAGGCAGTATACAATAT CATAATTGATCCAAAGAATAAAAGGGTGTTCATGATTAGTAATGTGTGTACATGTGTGCT TTTACTATTCAGATTTAGGCATGATTTTTTGAGTGTCTTTGTGTTTACTCTTTCATGGGA ACATTTGTACTGTGCCAAATTGGTGCGTTGCAAAAGCTTGTGAATGTATCAATAATATTT TTATCAACCCATCACCCTGCACCCTCTTGTATCAGACTCTTTTCTTGTTAGAGTAGTTGT TGCATTCGTCTTGATAAAGAGAGATCAATGAAAAGATGCACTGCGAGAACACTAGACAAC ACTAGCCATCCAATTCATTCCCTTCGAATGAAGTTAAAGGTGGGTTTATATGACACTCTA TTCCTAATTTGATGTCTTGGTTTATATTGTGATAGGCTCATGGTTATACGATTGAAGTGG ATTGTTTTTTATTTTTTGAGCACCCATTTTATGTTTTTCATTACAGCTATGTAGGTTTTT GTACAATACTCCCTCTGTTTCAAAATAGTAGTTGTTTTAGCTCTAGATTTTTATGTTTAT ATTCATATGTATGATAACGAATCTTGACACATATATAGGACACATACACTAAAAAGGTAA AACAAATTTTAATTTTGGACGGAGGGAGTACTTTATAGTGGTTCTGGCCTTCTTGACACC ATGGTGAAGCTAACAATGATAGCTCGTGTCACTAATGGATGTCCACTAGCAGAAGGGTTG GATGATGGGCGAGATTAGAAGGATGCTGATTTCTATAAGCAGCAAGCTAAACTTCTATTT AAGAACTTGTCAAAAGGGCATCATGAAGCTTCACGAATGTCAACTGAGACATGGCCCTAC TATTTCCATTACCCTTGTGCCATTTATGATCCTTATATGTATATGTATATGTATGTATGT TTGTGTATGTGTGTATATCAGAATTAGGCTTGCTTTTACATGTTGCTCCTCATATAGTTC TTTTGTTTGTCTAATTTCCAGCTAAAGATGATGCGTCCATTTGTAAACAGTTGGGATTCC ACTGTGGCTATATAAACTGCTTTATGTAATTGTCTATTTGTGTATCACACCATTGTCTCT TTAATTGCAAGAATATGTTTTGCAGGCATTCCTTTTTCCGTTTGTGATTCTTCATTTCTT TTCATTTTTATTACAGGGCTAGCAACATAAGTTGGATCCAAATTATAATGTTATGAAGAC TCTACAAGCTTTACTTTTTAAGGAATACTAGGCGAAGTCTCTTCAATACACGATCCAAGG GCTCATGGGGTCTTAGGGTGCTGCAATCCTCTCGAAAATTTTGATCTGGTTTGTGTTCAG CTGGAGGATCCTCTGTTCTCACCATCACGTTTGGCTTCTTTTCTACTTTGTTTCATGTTT CATTTCTTTGTACTTGTCCTGGCATTGTACTGCTAAAGCAACCTTGATGATAAAGTAATA GTAGCAGTAAAATTTT