Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029389_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:68587963:68589883:-1 gene:Zm00001d029389 gene_biotype:protein_coding transcript_biotype:protein_coding description:LOL3

Sequence

ATGGCGAGCGCGCGGCCGCCGCAGGCGCAGCGCACGGCGTGGTGCGGCCGCTGCGGCGCG
CGCCTGTCCGTGGCCCCCGGTGCGCGCTCCGTGCGGTGCGCGCTCTGCCACGCCGTGACG
CGCGTCGAGCGCCGCCCGCACGGCCTGCACCGCGCCGCCGTGGGCTTCATCAGGGGCCTC
ATCGGCGGCCTGACGCCGCCGCAGCGGCCCGCGGCGGCGCTCCAGGAGCTGCCGCCGAGC
TCCTTCCCGCGCGTCCGCGGCTGCAAGAAGCGCGCCCTCCTGGTGGGGATCAGCTACGCC
GGCACCAGGTACGAGCTCGGGGGCGCCGTCAACGACGTCAACTGCATGAGCTACCTGCTC
CGCGAGCGCTTCGGATTCCCGGCGGAATGCATCCTCGTGCTCACACAGGAGGACATGGAG
CCTGGCCGGGTGCCGACGCGGGCGAACCTGATGCGCGCCCTGCGGTGGCTCGTGGACGGC
GCCAGCGCCGGGGACTCCCTGGTGTTCCACTTCTCGGGCCACGGCGTGCAGAAGCTGGAC
AGGGACGGCGACGAGGCGGACGGCTACGACGAGGCGCTGTGCCCCGTGGACTTCGAGGAC
CCCCGCGGCGGCGGCGGCGTCATCCTGGACGACGAGATCAACGCCACCATCGTGCGCCCG
CTCGGCAAGGGCGTGAAGCTGCACGCCATCGTCGACACCTGCCACAGCGGCACCATACTC
GACCTCCCCTACCTCTGCCGCCTGTCCAGGACCGGGTACTGGCAGTGGGAGAACCAACAG
ACGGCCCGCCTCGCCGCGTCCGGCGAGACCAAGTGCACCAGCGGCGGCCTCGCCATCTCG
ATCAGCGGCTGCGGCGACAGCCAGACGTCGCAGGACACCACGGCGCTCTCCGGGTCCGCC
TCCACCGGCGCCATGACGTACAGCTTCATCAAGGCGGTGGAGTCGGAGCCGGGCACCACC
TACGGCCGCCTGCTGACGGCGATGAGAGCCACCATCCGCGACAACGGCGGTGAGTTCGGC
ATACCGGGCCCCATCGGCACCTTCTTCCGCCGGGTCATCACGTTCAGCTGCGCGCAGGAG
CCCCAGCTGTGCGCTTCAGAGACGTTCGACATCTACAGGAAACCTTTTCTCTTGTGA

Peptide Sequence

PEP ID

Zm00001d029389_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:68587963:68589883:-1 gene:Zm00001d029389 transcript:Zm00001d029389_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:LOL3

Sequence

MASARPPQAQRTAWCGRCGARLSVAPGARSVRCALCHAVTRVERRPHGLHRAAVGFIRGL
IGGLTPPQRPAAALQELPPSSFPRVRGCKKRALLVGISYAGTRYELGGAVNDVNCMSYLL
RERFGFPAECILVLTQEDMEPGRVPTRANLMRALRWLVDGASAGDSLVFHFSGHGVQKLD
RDGDEADGYDEALCPVDFEDPRGGGGVILDDEINATIVRPLGKGVKLHAIVDTCHSGTIL
DLPYLCRLSRTGYWQWENQQTARLAASGETKCTSGGLAISISGCGDSQTSQDTTALSGSA
STGAMTYSFIKAVESEPGTTYGRLLTAMRATIRDNGGEFGIPGPIGTFFRRVITFSCAQE
PQLCASETFDIYRKPFLL

Transcript Sequence

Transcript ID

Zm00001d029389_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:68587963:68589883:-1 gene:Zm00001d029389 gene_biotype:protein_coding transcript_biotype:protein_coding description:LOL3

Sequence

TCTCCCACGTGTGCGTTCGTTGCGCGTGACACGCCGAGGGATCGATCGATCGATCGGGGT
CCCAGCCGTAGCATGGCGAGCGCGCGGCCGCCGCAGGCGCAGCGCACGGCGTGGTGCGGC
CGCTGCGGCGCGCGCCTGTCCGTGGCCCCCGGTGCGCGCTCCGTGCGGTGCGCGCTCTGC
CACGCCGTGACGCGCGTCGAGCGCCGCCCGCACGGCCTGCACCGCGCCGCCGTGGGCTTC
ATCAGGGGCCTCATCGGCGGCCTGACGCCGCCGCAGCGGCCCGCGGCGGCGCTCCAGGAG
CTGCCGCCGAGCTCCTTCCCGCGCGTCCGCGGCTGCAAGAAGCGCGCCCTCCTGGTGGGG
ATCAGCTACGCCGGCACCAGGTACGAGCTCGGGGGCGCCGTCAACGACGTCAACTGCATG
AGCTACCTGCTCCGCGAGCGCTTCGGATTCCCGGCGGAATGCATCCTCGTGCTCACACAG
GAGGACATGGAGCCTGGCCGGGTGCCGACGCGGGCGAACCTGATGCGCGCCCTGCGGTGG
CTCGTGGACGGCGCCAGCGCCGGGGACTCCCTGGTGTTCCACTTCTCGGGCCACGGCGTG
CAGAAGCTGGACAGGGACGGCGACGAGGCGGACGGCTACGACGAGGCGCTGTGCCCCGTG
GACTTCGAGGACCCCCGCGGCGGCGGCGGCGTCATCCTGGACGACGAGATCAACGCCACC
ATCGTGCGCCCGCTCGGCAAGGGCGTGAAGCTGCACGCCATCGTCGACACCTGCCACAGC
GGCACCATACTCGACCTCCCCTACCTCTGCCGCCTGTCCAGGACCGGGTACTGGCAGTGG
GAGAACCAACAGACGGCCCGCCTCGCCGCGTCCGGCGAGACCAAGTGCACCAGCGGCGGC
CTCGCCATCTCGATCAGCGGCTGCGGCGACAGCCAGACGTCGCAGGACACCACGGCGCTC
TCCGGGTCCGCCTCCACCGGCGCCATGACGTACAGCTTCATCAAGGCGGTGGAGTCGGAG
CCGGGCACCACCTACGGCCGCCTGCTGACGGCGATGAGAGCCACCATCCGCGACAACGGC
GGTGAGTTCGGCATACCGGGCCCCATCGGCACCTTCTTCCGCCGGGTCATCACGTTCAGC
TGCGCGCAGGAGCCCCAGCTGTGCGCTTCAGAGACGTTCGACATCTACAGGAAACCTTTT
CTCTTGTGACCAGCTCATTTCATCATTTGCTTTGTATTTTGTGAGATGTGCGTGAAAGAG
CTAGAATGGCGTGCAGGATTTTGATCTCTTTTCAGTAGAAAACTCTACAGATGCAGTGAA
AGTGGAGCTGAGATTGGGAATCCCAGCATCTTGCAGTGACCCGAACTTAGTTATGCTCAC
ACAGTGACGTAGAGGCGGTTCACTGAACGAGATGCCGTAATAGGCGTTCTTTTGGCTGAA
ATTGTGCCGATATATGCTGATTCGTAAGGCCTTTTTTGGATTCTCA