Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029356_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:1:67229078:67231308:-1 gene:Zm00001d029356 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:benzoxazinone synthesis11 description: benzoxazinone synthesis11
Sequence

ATGGCACTCATCATGCAGGAGAGTAGTAGCCATGATTTGCTCCAAGCTCACGACGAGCTC
TTGCACCATTCCCTGTGCTTCGCCAAATCGCTCGCGCTCGCCGTGGCGCTGGACCTCCGC
ATCCCCGACGCGATCCACCACCACGGCGCCGGCGGCGCCACCCTTCTCCAGATCCTCGCC
GAGACTGCGCTCCACCCAAGCAAGCTTCGCGCCCTTCGCCGCCTCATGCGCGTGCTCACC
GTCACGGGCATCTTCAGCGTCGAGCAACCACCAGCAGGTGGTGGTGATAATTCAACCGTC
CACACGTCGGACGACGAAGCTGTCGTCGTCTACAGGTTGACGGCAGCCTCCCGCTTCCTC
GTCAGCGACGAGGTGAGCACGGCGACCTTGGCTCCCTTTGTGAGTCTGGCGCTCCAGCCT
ATCGCTGCCTGTCCGCACGCCCTGGGTATCTCCGCGTGGTTCCGGCAGGAGCAGCACGAG
CCGTCCCCGTATGGCCTGGCGTTCCGGCAGACCCCAACGATCTGGGAACATGCTGACGAC
GTAAACGCCTTGCTGAACAAAGGCATGGCCGCGGACAGCCGCTTCCTCATGCCAATTGTG
CTGAGGGAGTGCGGCGAGACGTTTCGTGGGATCGACTCGTTGGTTGACGTCGGTGGTGGC
CATGGTGGCGCCGCCGCCGCCATCGCCGCCGCCTTCCCCCACCTCAAGTGCAGCGTGCTT
GACCTCCCGCACGTTGTCGCCGGTGCTCCGTCTGATGGCAACGTGCACTTCGTCGCAGGC
AATATGTTTGAGAGTATTCCACCTGCAACCGCTGTTTTCCTCAAGGTACCATCCGTCGTC
ACTGCTGACTGCTCCCTCCTCCATGGCTCCATTTCTCAATGTGTTTGCATTTTGAGATCC
ATGGTCAAACTTCAAAGTTTTGACTATCGTTTTGTCTTGTCTTGGGCGAGATGCCTCTCC
CGTCCAAAAATAATTTAA

Peptide Sequence

PEP ID

Zm00001d029356_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:1:67229078:67231308:-1 gene:Zm00001d029356 transcript:Zm00001d029356_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:benzoxazinone synthesis11 description: benzoxazinone synthesis11
Sequence

MALIMQESSSHDLLQAHDELLHHSLCFAKSLALAVALDLRIPDAIHHHGAGGATLLQILA
ETALHPSKLRALRRLMRVLTVTGIFSVEQPPAGGGDNSTVHTSDDEAVVVYRLTAASRFL
VSDEVSTATLAPFVSLALQPIAACPHALGISAWFRQEQHEPSPYGLAFRQTPTIWEHADD
VNALLNKGMAADSRFLMPIVLRECGETFRGIDSLVDVGGGHGGAAAAIAAAFPHLKCSVL
DLPHVVAGAPSDGNVHFVAGNMFESIPPATAVFLKVPSVVTADCSLLHGSISQCVCILRS
MVKLQSFDYRFVLSWARCLSRPKII

Transcript Sequence

Transcript ID

Zm00001d029356_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:67229078:67231308:-1 gene:Zm00001d029356 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:benzoxazinone synthesis11 description: benzoxazinone synthesis11
Sequence

CCACAACCAATTAGCCATTGGCCAGCAGTGGGAAGTGGGAACGATGGCACTCATCATGCA
GGAGAGTAGTAGCCATGATTTGCTCCAAGCTCACGACGAGCTCTTGCACCATTCCCTGTG
CTTCGCCAAATCGCTCGCGCTCGCCGTGGCGCTGGACCTCCGCATCCCCGACGCGATCCA
CCACCACGGCGCCGGCGGCGCCACCCTTCTCCAGATCCTCGCCGAGACTGCGCTCCACCC
AAGCAAGCTTCGCGCCCTTCGCCGCCTCATGCGCGTGCTCACCGTCACGGGCATCTTCAG
CGTCGAGCAACCACCAGCAGGTGGTGGTGATAATTCAACCGTCCACACGTCGGACGACGA
AGCTGTCGTCGTCTACAGGTTGACGGCAGCCTCCCGCTTCCTCGTCAGCGACGAGGTGAG
CACGGCGACCTTGGCTCCCTTTGTGAGTCTGGCGCTCCAGCCTATCGCTGCCTGTCCGCA
CGCCCTGGGTATCTCCGCGTGGTTCCGGCAGGAGCAGCACGAGCCGTCCCCGTATGGCCT
GGCGTTCCGGCAGACCCCAACGATCTGGGAACATGCTGACGACGTAAACGCCTTGCTGAA
CAAAGGCATGGCCGCGGACAGCCGCTTCCTCATGCCAATTGTGCTGAGGGAGTGCGGCGA
GACGTTTCGTGGGATCGACTCGTTGGTTGACGTCGGTGGTGGCCATGGTGGCGCCGCCGC
CGCCATCGCCGCCGCCTTCCCCCACCTCAAGTGCAGCGTGCTTGACCTCCCGCACGTTGT
CGCCGGTGCTCCGTCTGATGGCAACGTGCACTTCGTCGCAGGCAATATGTTTGAGAGTAT
TCCACCTGCAACCGCTGTTTTCCTCAAGGTACCATCCGTCGTCACTGCTGACTGCTCCCT
CCTCCATGGCTCCATTTCTCAATGTGTTTGCATTTTGAGATCCATGGTCAAACTTCAAAG
TTTTGACTATCGTTTTGTCTTGTCTTGGGCGAGATGCCTCTCCCGTCCAAAAATAATTTA
AAATTTTATTTTACAGTATAGAGTAACGATATCTATAACACCGAACATGCATACTATAAA
AATATATTTTATGATGTATCAATGATACTAATAATAATGCTATATTTTAAAAGATTTGTT
CAAATAAAATAGTTTGACTTTAGAACAACTCTATAATTTTATTCAGACTATGTTTTGTAG
GGATTTAGATATAAATCCCCTCATAAAATATTTTGGGTAATCAATTAGAATCAGTTTATA
AAACCGTTTTGTTTGTGTGGGTGGATTCCTATTTCCACAAAATGCATTTTATATAAACAA
TCGTATAAATGAAAATAAGCTTCAAAAAAATTCTGAACTTCGAGTGGACAAGAAAAAATT
TAAATATACCCTATTATATTTTGTTGCACTTAGAAAATCATAATTTAAGAAAACTATGAT
CACTAGTGTATAGCAAACACTGAATCGTCCCGAAACTAGTCTAGGAACTTTTGACATATA
TGTATATAGTGCAAAATAGAAGAGTCCTTTCAAATGTTTCTAGAACAAAACACTATGCAA
CACTTCTATTTAATTTGGCAGCGATTCTAATGTTCCAATATTACCAAATGAACCCTTAAT
TTGGGACGAAAAAAGTAGAAGTAAATAGTTCTAACATCATAAACATACATGTTATTATCT
TTGAATCCAAACACCAAGAACCCTTTTGTTCATCATCTATCAATTAACTTGATGAAATCT
ATGCCAGAAAACTCTACATGACTGGGGTGACGATGAGTGTGTCAAGATATTGAAGAATTG
CAAGCAAGCCATATCTCCACGGGATGCAGGTGGGAAGGTAATAATCTTGGACGTGGTAGT
TGGATATAAACAGTCAAACATAAAGCATCAAGAGACACAAGTTATGTTTGATTTGTATAT
GATGGCGGTTAACGGAGTTGAGCGTGATGAGCAAGAGTGGAAGAAGATCTTCATTGAAGC
TGGATTCAAAGACTACAAAATTCTACCCGTCATCGGTGACGTATCAGTCATCATCGAGGT
CTATCCTTGAATGCTTTGTGAACAAAGACCTCCATAATAAACTGAAGACCATGAAGGTGT
TGATAGTATATTATGATTTTTTATTTGTATTGTACACTTGATTCTTTGAGTATTTGTAAT
GACAAGCTGAGTAATTGTGTTTTTTTGTTAATGTGGTCTTATAG