Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029342_T015
CDS Infomation	cds chromosome:B73_RefGen_v4:1:66637546:66648174:1 gene:Zm00001d029342 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase
Sequence	ATGGCGGCGGCTGACCCCGAGACGGCGGCGGCGCTGCGGGGGGAGGTCGCCGCGCTGCGG ATGCGCGTACAGGAGCTGGAGGCAGAGAATCAGAGGCTGGCAAGGATTGCTTCGACCTGT ACCTGCGGATTCAAGGGCAGTGTTTCAAAGGTGTCGCCTAGGTGGCCAGGCGTACCCAGC TTGCCTTGTGAAATAGTGATGCCTTGTCGCCTAGGCGTCCAGGAGGGCAGTGTTGGATCC ATTACTGCACATCATAATGTGAAATTTCATCAAAATAGCACTATGGAGAAAGATTTGAGC TCTCCATTTGATCACACAGTAATATCCAATGCAAATGAAATGCAGTGCAACAGAAATGCA GATGACAATGGTTTACCTGAGGATTCAAGCAAGCATACTAAAAGAACAGGTCGCAAGGTG GGCATTTTAAGTCACTGCCCAAAGCGACTAGTTGCTCTCAAAGTCATGTATTTCGGCCAG AGATTCTATGGTTTTTCTTCTGAAGGTAACATTGAACCAACAGTTGAGTCTGAGATATTT AAAGCACTGGAAAGAGCAAAACTGATGGTTGCCAATAGGAAAGAATCATGCTACTCGAGG TGTGGAAGAACTGACAAAGGAGTTTCTGCTACTGGACAGGTGATTTCTTTATATCTGCGA TCGAACATAAAGGATGTTGGGGGGGACATGTTAGATGAAAGATCCGAAATTGATTATGTG AAGGTATTGAATAGAATTCTTCCAAGAGATATACGTGTACTGGGTTGGTGTCCTGTTCCA GCAGATTTTCATGCAAGATTCACCTGTTTGAGCCGGGAATATAAATACTTATTTTGGAAA GGGGACCTGGATATATTGGAAATGCAGAAAGCTGCATCCAAATTCATTGGAGAACACGAC TTTAGGAATTTTTGTAAGATGGATGCAGCAAATGTGAGTAACTACAGGCGGCACATTACA GAATTTACTATTTCTGCATGTGACAGAAGGTCCAACAATGATGAGCTGTGTTCCATGACG ATCAAGGGTAGCGCTTTTCTGTGGCACCAAGTTCGCTGCATGGTAGCTGTGTTATTTCTA ATAGGTCAAGGCCTTGAGTCACCATCCGTAGTTGATTCACTATTGGATATTATGAAAACA TCTAGGAAACCTCAATATAAAATGGCGCCAGAGCTTCCATTGATTTTGCAATCTTGTCTA TTTGATAAAGCCAACTTTATGTGTTCAGCAGATGCCAGCCGGTCTCTGACTGAGCACTTA AATGATGAATATCGTCACCATATGCTCCAAGCTGAAATATTTCACATAGCGTCATCCTGT TTACCTTTTCCAGAACCAAATTCATCAGAAACGCCTCAGAAGAAGAGGAACCATATTCCT CTCCTGTCACGAGAGACAGAGCCTTCTTACGAGGAGCGCATATCGAAAGTCAAAGCGAAG CTGGCTGATAATCTCAAGTAG

Peptide Sequence

PEP ID	Zm00001d029342_P015
PEP Infomation	pep chromosome:B73_RefGen_v4:1:66637546:66648174:1 gene:Zm00001d029342 transcript:Zm00001d029342_T015 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase
Sequence	MAAADPETAAALRGEVAALRMRVQELEAENQRLARIASTCTCGFKGSVSKVSPRWPGVPS LPCEIVMPCRLGVQEGSVGSITAHHNVKFHQNSTMEKDLSSPFDHTVISNANEMQCNRNA DDNGLPEDSSKHTKRTGRKVGILSHCPKRLVALKVMYFGQRFYGFSSEGNIEPTVESEIF KALERAKLMVANRKESCYSRCGRTDKGVSATGQVISLYLRSNIKDVGGDMLDERSEIDYV KVLNRILPRDIRVLGWCPVPADFHARFTCLSREYKYLFWKGDLDILEMQKAASKFIGEHD FRNFCKMDAANVSNYRRHITEFTISACDRRSNNDELCSMTIKGSAFLWHQVRCMVAVLFL IGQGLESPSVVDSLLDIMKTSRKPQYKMAPELPLILQSCLFDKANFMCSADASRSLTEHL NDEYRHHMLQAEIFHIASSCLPFPEPNSSETPQKKRNHIPLLSRETEPSYEERISKVKAK LADNLK

Transcript Sequence

Transcript ID	Zm00001d029342_T015
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:66637546:66648174:1 gene:Zm00001d029342 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase
Sequence	AGCGAAGGGTTCCTCTGACCGGGCGAGGCTCTCATGGCGGCGGCTGACCCCGAGACGGCG GCGGCGCTGCGGGGGGAGGTCGCCGCGCTGCGGATGCGCGTACAGGAGCTGGAGGCAGAG AATCAGAGGCTGGCAAGGATTGCTTCGACCTGTACCTGCGGATTCAAGGGCAGTGTTTCA AAGGTGTCGCCTAGGTGGCCAGGCGTACCCAGCTTGCCTTGTGAAATAGTGATGCCTTGT CGCCTAGGCGTCCAGGAGGGCAGTGTTGGATCCATTACTGCACATCATAATGTGAAATTT CATCAAAATAGCACTATGGAGAAAGATTTGAGCTCTCCATTTGATCACACAGTAATATCC AATGCAAATGAAATGCAGTGCAACAGAAATGCAGATGACAATGGTTTACCTGAGGATTCA AGCAAGCATACTAAAAGAACAGGTCGCAAGGTGGGCATTTTAAGTCACTGCCCAAAGCGA CTAGTTGCTCTCAAAGTCATGTATTTCGGCCAGAGATTCTATGGTTTTTCTTCTGAAGGT AACATTGAACCAACAGTTGAGTCTGAGATATTTAAAGCACTGGAAAGAGCAAAACTGATG GTTGCCAATAGGAAAGAATCATGCTACTCGAGGTGTGGAAGAACTGACAAAGGAGTTTCT GCTACTGGACAGGTGATTTCTTTATATCTGCGATCGAACATAAAGGATGTTGGGGGGGAC ATGTTAGATGAAAGATCCGAAATTGATTATGTGAAGGTATTGAATAGAATTCTTCCAAGA GATATACGTGTACTGGGTTGGTGTCCTGTTCCAGCAGATTTTCATGCAAGATTCACCTGT TTGAGCCGGGAATATAAATACTTATTTTGGAAAGGGGACCTGGATATATTGGAAATGCAG AAAGCTGCATCCAAATTCATTGGAGAACACGACTTTAGGAATTTTTGTAAGATGGATGCA GCAAATGTGAGTAACTACAGGCGGCACATTACAGAATTTACTATTTCTGCATGTGACAGA AGGTCCAACAATGATGAGCTGTGTTCCATGACGATCAAGGGTAGCGCTTTTCTGTGGCAC CAAGTTCGCTGCATGGTAGCTGTGTTATTTCTAATAGGTCAAGGCCTTGAGTCACCATCC GTAGTTGATTCACTATTGGATATTATGAAAACATCTAGGAAACCTCAATATAAAATGGCG CCAGAGCTTCCATTGATTTTGCAATCTTGTCTATTTGATAAAGCCAACTTTATGTGTTCA GCAGATGCCAGCCGGTCTCTGACTGAGCACTTAAATGATGAATATCGTCACCATATGCTC CAAGCTGAAATATTTCACATAGCGTCATCCTGTTTACCTTTTCCAGAACCAAATTCATCA GAAACGCCTCAGAAGAAGAGGAACCATATTCCTCTCCTGTCACGAGAGACAGAGCCTTCT TACGAGGAGCGCATATCGAAAGTCAAAGCGAAGCTGGCTGATAATCTCAAGTAGAGCCAC CGTTTTCAATTGTTACACCAATACTTGGAAGAGAACTTATGGAACTGTAGAAGGTTTCTT CCAAAAGCCTATATGGCACCCCATCTCTTGGTGACTGTCGTTCGCTACAGGATGACGGCA AAGCTTTATTTAGCGCTGGTCGGTGTCAGTGTCACTCATATGGTTGTTAGAGCTCATGCT CAGGGATTTCTGAATGCTGAGGCCTTGGATCTTCTCGCTCCCAAGGCCACGGGCAGGAAA TCACAAACGGGAGAAGTTCTATGGTGTAACACCCTTGTACTTGCACAGTTTTACAGCAAA TCAAATGATAGCAGAGTAGCAGGAAGTACCATGTT