Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029303_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:65496452:65501448:-1 gene:Zm00001d029303 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756); Has 1239 Blast hits to 998 proteins in 204 species: Archae - 4; Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87; Viruses - 5; Other Eukaryotes - /.../ource: NCBI BLink).
Sequence	ATGCCGCGAAACTTCCGCAAGCGGGGCATCGAGCAGGACACTGACGACCGCTCCGACGAC GAGGACACTCGCCGCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGG AAGCTGGGTATCCCCGCCGACCTCGCCGCCGCATCCACTAACGGGTCCTCCGCCCGTGGT CTATTGGGCACCGGGGCAGCGGTCGCCGGTGAGGCCGAGAAGGAGGACCTCGTCCTCCAG GACACCTTCGCTCAGGAGACCGCCGTCACTATCGAGGACCCCAACATGTTGAGGTACGTG GAGACCGAGCTGGCGAAGAAGAGGGGTAAGATGGTTGATGTGGGACACAAGGAAGAGATG GACCATGTGGACGAGCTCTATACCGTGCCAGACCACCTCAAGGTAAAGAAGAAGAACTCA GAGGAGAGCTCGACACAATGGACAACTGGCATTGCTGAAGTTCAGCTGCCTATTGAGTAC AAATTAAGAAACATCGAAGAAACCGAGGCGGCTAAAAAGTTGCTGCAAGAGAAAAGGCTT GCAAGAAAACCAAAACCAGATGCAAACATTCCATCAAGTTATAGTGCTGATTATTTCCAC CGTGGCAAAGAATATGATGAAAAACTGCGAAGAGAGAATCCTGGGTTGTACAAAGATAAT GATTCTCGGCCAAGTGGAAATCCAGGAGGCAAAGCAACAGATACTAAAAATCCAGATGGT GTTGGTGCAGGACGGAGAGAAGCTGCGAGTGATGAACTCATGCTTCAGCGTTTCCGCAAA CGAGAAAAATTCCGCGCCCTTCGAAGATAA

Peptide Sequence

PEP ID	Zm00001d029303_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:65496452:65501448:-1 gene:Zm00001d029303 transcript:Zm00001d029303_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756); Has 1239 Blast hits to 998 proteins in 204 species: Archae - 4; Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87; Viruses - 5; Other Eukaryotes - /.../ource: NCBI BLink).
Sequence	MPRNFRKRGIEQDTDDRSDDEDTRRIALEEIKYMQKLRERKLGIPADLAAASTNGSSARG LLGTGAAVAGEAEKEDLVLQDTFAQETAVTIEDPNMLRYVETELAKKRGKMVDVGHKEEM DHVDELYTVPDHLKVKKKNSEESSTQWTTGIAEVQLPIEYKLRNIEETEAAKKLLQEKRL ARKPKPDANIPSSYSADYFHRGKEYDEKLRRENPGLYKDNDSRPSGNPGGKATDTKNPDG VGAGRREAASDELMLQRFRKREKFRALRR

Transcript Sequence

Transcript ID	Zm00001d029303_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:65496452:65501448:-1 gene:Zm00001d029303 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756); Has 1239 Blast hits to 998 proteins in 204 species: Archae - 4; Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87; Viruses - 5; Other Eukaryotes - /.../ource: NCBI BLink).
Sequence	AAAAAGTCGTTCGGGATTCAAACCCTTCGATCCCAAATCTGCCCTGCACGCCTCGCCGCC GGCCACACCCCCGGCGGTCGTCGCCCTACCCGCCCTTCTCCTTACCTCTAACCCCGCCGG AGCCCAACACCTCCCCACCATGCCGCGAAACTTCCGCAAGCGGGGCATCGAGCAGGACAC TGACGACCGCTCCGACGACGAGGACACTCGCCGCATCGCCCTCGAGGAGATCAAGTACAT GCAGAAGCTCCGGGAGAGGAAGCTGGGTATCCCCGCCGACCTCGCCGCCGCATCCACTAA CGGGTCCTCCGCCCGTGGTCTATTGGGCACCGGGGCAGCGGTCGCCGGTGAGGCCGAGAA GGAGGACCTCGTCCTCCAGGACACCTTCGCTCAGGAGACCGCCGTCACTATCGAGGACCC CAACATGTTGAGGTACGTGGAGACCGAGCTGGCGAAGAAGAGGGGTAAGATGGTTGATGT GGGACACAAGGAAGAGATGGACCATGTGGACGAGCTCTATACCGTGCCAGACCACCTCAA GGTAAAGAAGAAGAACTCAGAGGAGAGCTCGACACAATGGACAACTGGCATTGCTGAAGT TCAGCTGCCTATTGAGTACAAATTAAGAAACATCGAAGAAACCGAGGCGGCTAAAAAGTT GCTGCAAGAGAAAAGGCTTGCAAGAAAACCAAAACCAGATGCAAACATTCCATCAAGTTA TAGTGCTGATTATTTCCACCGTGGCAAAGAATATGATGAAAAACTGCGAAGAGAGAATCC TGGGTTGTACAAAGATAATGATTCTCGGCCAAGTGGAAATCCAGGAGGCAAAGCAACAGA TACTAAAAATCCAGATGGTGTTGGTGCAGGACGGAGAGAAGCTGCGAGTGATGAACTCAT GCTTCAGCGTTTCCGCAAACGAGAAAAATTCCGCGCCCTTCGAAGATAAGCCAGAGCTGA CAGGTTGCTAGATTGTGCCAGTTGCCTTTGAAGCTCAAAAATATAGTTGTGGCTGCATAA AGTCCCAACATATCATGTCCTTTTAGTGAGAAACTTACTGTAAAATGCATCCTTGGTTAT TGAGTCTGCTTCTGCAGCTGCTAAGGGCAAGGAGCAGATTAACCTTATTACAGAGGCGAT TTGGGGCAATATATTTGAGCTGAGGGATATCTGAATTTTGTGTCAGCTCTGAGGCTCATA TATTAAGAGGGGCCGCAGTGGTTCAGGACATAGGAGCTCATAACTTTCCAGATGCTCAGA TCGTGCCATGTTCATCTGCAATGGAAGAAAGGAAGGTGTGTTCTCCGTACAAATATAAAT GAACTGCTTCGACATCTTGAGCAAACTCCAAGGGGTAGTGCGAATGTCTGATCTCATTTT CTTTGGAGTGAATGGCAAAGCCTGCAAATTCATCTTTCTAGTCTAGAATGTATTGTTTCT CTGAATTATTTGCAGTTTGCTGCAGTAGCATCAGTTATCTAGATTTCTAGGGACGAGCAA TCTGTGAGTTGTTTTTGTTGCACTATTGCTGCTTGCTTTGCCTTTACTAGTTCAAGTATC AATTCTTTATAAGAGTTTTGAGTTTCATATC