Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029272_T015
CDS Infomation

cds chromosome:B73_RefGen_v4:1:64476752:64479671:1 gene:Zm00001d029272 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase PASTICCINO1
Sequence

ATGGACACCAGAGGGCTGCCCAAGGGCCTGGTGCTCGGGAGCTGCACCGTCCTCGAGGCC
GCCGGGCAGGGCGCGCTTGGCCCACTGTACCAACTGCTGGAGTCCACCGTCGTCTCCGGC
CGGGGACGTGGGATGCCGGCTCAGGAGCGAGTGATTCTGCTCCATTTTGGCGCCAACAGT
GGTTCACATAGGTTTGCGCTTGAGAATCGAGCTGTCAATGAAGCTACTTTCCGTTGCCCT
GATGAGCTAGGATGGAAACCACAGAGGACGCCTATCATATCATCCGATGGAAACATCTTA
CACGCAAGACAGACCACACTGCCACTGAAGGAAATAAGCAAGTCTCTCCAGCAAATGGGA
TATGATGTGATGCCTTCAGATGACGCTGGTCGATTTGTGTGCAACTATGTCTATTACCAC
TCGCTTAAGTTTGCAGAGAAGCATGGCATCACGTCTCTCTTCGTTCATTTCCCCCTCTTC
CTGGCAATTGATGAGGAAGTTCAGATGCAATTTGTTGCCTCCCTTCTTGAAGTCCTCGCT
TCCTTGAACTTCTAG

Peptide Sequence

PEP ID

Zm00001d029272_P015
PEP Infomation

pep chromosome:B73_RefGen_v4:1:64476752:64479671:1 gene:Zm00001d029272 transcript:Zm00001d029272_T015 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase PASTICCINO1
Sequence

MDTRGLPKGLVLGSCTVLEAAGQGALGPLYQLLESTVVSGRGRGMPAQERVILLHFGANS
GSHRFALENRAVNEATFRCPDELGWKPQRTPIISSDGNILHARQTTLPLKEISKSLQQMG
YDVMPSDDAGRFVCNYVYYHSLKFAEKHGITSLFVHFPLFLAIDEEVQMQFVASLLEVLA
SLNF

Transcript Sequence

Transcript ID

Zm00001d029272_T015
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:64476752:64479671:1 gene:Zm00001d029272 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase PASTICCINO1
Sequence

GAGTCAGAAAAGCCGCTCTTCTTCCGTTCCGCCCGCCCGCCCGCTTCTCTCTCCCGCCCC
AACCCGCGAGACCGCCGGCAGCTCAGGGCAGGAGGAGGAGCGGCTTCAATTCGTCCCCGC
GCCGCGCGCTCAGGACCCGCCCCCGCTGCCTCTCCCGAGGGTTCCAGGTTCTCATCAGGC
AGAGGCAGAGGTCACCTTCTGCTGCTCAACGCAACACTGCACATACATACATACAGATGG
GTTCCGACTTCCGAGGGGCCTTCTCCCGTCACCACCACCGTCCACGTCACTGGGTTCAAG
AAGTTCCACGGAGTCGCCGACAACCCCACCGAGAAGATCGTGCGCAACCTCGCGTCGTTC
ATGGACACCAGAGGGCTGCCCAAGGGCCTGGTGCTCGGGAGCTGCACCGTCCTCGAGGCC
GCCGGGCAGGGCGCGCTTGGCCCACTGTACCAACTGCTGGAGTCCACCGTCGTCTCCGGC
CGGGGACGTGGGATGCCGGCTCAGGAGCGAGTGATTCTGCTCCATTTTGGCGCCAACAGT
GGTTCACATAGGTTTGCGCTTGAGAATCGAGCTGTCAATGAAGCTACTTTCCGTTGCCCT
GATGAGCTAGGATGGAAACCACAGAGGACGCCTATCATATCATCCGATGGAAACATCTTA
CACGCAAGACAGACCACACTGCCACTGAAGGAAATAAGCAAGTCTCTCCAGCAAATGGGA
TATGATGTGATGCCTTCAGATGACGCTGGTCGATTTGTGTGCAACTATGTCTATTACCAC
TCGCTTAAGTTTGCAGAGAAGCATGGCATCACGTCTCTCTTCGTTCATTTCCCCCTCTTC
CTGGCAATTGATGAGGAAGTTCAGATGCAATTTGTTGCCTCCCTTCTTGAAGTCCTCGCT
TCCTTGAACTTCTAGTAGTAACCTGATGGTAGATCTATCTCTTCCAGCGGTGTATTGTTC
CCAATTTATTTGGAAGGGTTCCCAATTTACATGTGGAGTGAATAAGAATGAGGAATCATT
CATGGAGTTATGTGTGCTTCAAAATGTGTAAAAAAACAGCTCTTCTCAAAGAACATGTCC
AGGCAGTACAGATGTACAAATATCCAAAGTGGTTTATATGACAGGTGCTATTGTTC