Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029272_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:1:64438387:64476345:1 gene:Zm00001d029272 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase PASTICCINO1
Sequence

ATGGCTCACGAAGTTGGCGACAACGGCGGCGAACTCCCGCCGCCCGCGAAGAAGAAGTCG
CCCGCCGAGGAGGAGGCCGAGAAGAGGAGGAAGAAGCTTACACCTGGGAGCTTGATGAAG
GGCATCATACGGTCTGGGAGTGGTGATGCCACCCCTGCAGAGGGCGATCAGGTTATACTT
CATTGCACTACTCGGACGATGGATGGTATTATTGTCAATTCTACAAGAAGGGAGCACGGA
GGTAAAGGAATCCCACTCAGATTTGTTTTAGGGAAGAGCAAGATGATCCTAGGCTTTGCT
GAAGGCTTCCCAACAATGCTGAAGGGTGAAATTGCTATGTTCAAAATGCAGCCTAAAATT
CACTACGCTGAGGTTGATTGTCCAGTTGCAGCTCCAGATGGCTTCCCGAAAGATGATGAA
CTTCAATTTGAGATTGAAATGTTGGATTTCTTTAAAGCCAAGGTTGTGGCAGAGGATTTG
GGGGTGGTAAAGAAGATAGTTGAAGAAGGCAAGGGATGGGAAACACCTAGAGAGCCATAT
GAAATAACAGCACGGATAACTGTAAGAACAGCAGATGGAAAAGAAATTATTCCAAGTAAA
GAAGAGGCATATTTCTTTACTATTGGTAAATCTGAGGTACCTAAAGGGCTTGAAATGGGC
ATTGGAACAATGGCTCGCAAGGAAAAGGCAATTGTTTTTGTTAGCAATACTTATTTGACG
AAGTCCTCACTAATGCCAGAGCTTGAAGGCCTTGAAGAAGTTCATTTTTACATTGAATTG
GTTCAGTTTATCCAGGTGAGAGACATGCTTGGTGATGGTCGTCTAATAAAACGACGTGTA
GTTGATGGAAAAGGTGAATTTCCAATGGACTGTCCTCTTCATGACAGCTTATTAAGAGTG
CATTATAAGGGTATTCTCCTTGATGAACCAAAGTCAGTGTTTTATGATACACGTGCCGAT
AATGATGGTGAACCGTTGGAATTCTGTTCCGGAGAAGGCTTGGTTCCAGAGGGATTTGAA
ATGTGTGTTCGGCTAATGCTTCCTGGTGAAAAATCTGTTGTCACCTGCCCACCAGATTTT
GCATATGATAAGTTCCCAAGGCCAGCAAATGTTCCTGAAGGAGCTCATGTTCAGTGGGAA
ATTGAACTACTTGGGTTTGAAATGCCCAAGGATTGGACTGGCTTAACTTTCGAAGAAATC
ATGGATGAGGCAGACAAAATAAAGAACACGGGTAACAGACTGTTTAAAGAAGGAAAGTTC
GAACTTGCAAAGGCGAAATATGATAAGGTGCTTAGGGAATATAACCACGTGCATCCTCAT
GATGATGAAGAGGGAAAAATCTTTGCTAATTCAAGAAATTCCCTACATCTAAATGTAGCT
TTTTGCTACCAGAAGATGGGTGAATACAGAAAATCCATTGAAACATGCAATAAGGTGCTG
GACACAAATCCTGTGCATGCGAAAGCTCTTTACCGCCAAGGAATGTCCTACATGTTACTC
GGGGAATTTGATGATGCGAGGAATGATTTTGAGAAGATGATTACCGTTGACAAGTCATCA
GAACCGGACGCTACAGCTGCCCTCCTTAAACTTAAGCAGAAGGAACAGGAAGCTGAAAAG
AAGGCGAGGAAGCAGTTCAAAGGGCTCTTTGACAAGAAGCCGGGAGAGATATCTGAAGTT
GGTGTAGAATCAGAGGGTGGAAAGGATGCGGGTGATGCAAGGGGCTCTGGTGAGGCAACA
AGTGCTGATAGAGGTGCAAATACAATGGATAGTCCGACCAGAGAATCAGAGTACGCATTC
GAGGAAGAGAGGCCTGGGCTTCTTGGCCGCTTGTGGCCTTCTGCGAGGAGGATCTTCTCG
TCTGTTGGCATAAACAGGTGTACAATACTATAA

Peptide Sequence

PEP ID

Zm00001d029272_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:1:64438387:64476345:1 gene:Zm00001d029272 transcript:Zm00001d029272_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase PASTICCINO1
Sequence

MAHEVGDNGGELPPPAKKKSPAEEEAEKRRKKLTPGSLMKGIIRSGSGDATPAEGDQVIL
HCTTRTMDGIIVNSTRREHGGKGIPLRFVLGKSKMILGFAEGFPTMLKGEIAMFKMQPKI
HYAEVDCPVAAPDGFPKDDELQFEIEMLDFFKAKVVAEDLGVVKKIVEEGKGWETPREPY
EITARITVRTADGKEIIPSKEEAYFFTIGKSEVPKGLEMGIGTMARKEKAIVFVSNTYLT
KSSLMPELEGLEEVHFYIELVQFIQVRDMLGDGRLIKRRVVDGKGEFPMDCPLHDSLLRV
HYKGILLDEPKSVFYDTRADNDGEPLEFCSGEGLVPEGFEMCVRLMLPGEKSVVTCPPDF
AYDKFPRPANVPEGAHVQWEIELLGFEMPKDWTGLTFEEIMDEADKIKNTGNRLFKEGKF
ELAKAKYDKVLREYNHVHPHDDEEGKIFANSRNSLHLNVAFCYQKMGEYRKSIETCNKVL
DTNPVHAKALYRQGMSYMLLGEFDDARNDFEKMITVDKSSEPDATAALLKLKQKEQEAEK
KARKQFKGLFDKKPGEISEVGVESEGGKDAGDARGSGEATSADRGANTMDSPTRESEYAF
EEERPGLLGRLWPSARRIFSSVGINRCTIL

Transcript Sequence

Transcript ID

Zm00001d029272_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:64438387:64476345:1 gene:Zm00001d029272 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase PASTICCINO1
Sequence

CGAAACTGCTCCGCCTCCCGGCCAATGCGCAGTTGCGCTCGCGCAGACGCGCACGGACAG
CGCCACATCGGCCTTGATTAGCGAAGTGTTCCCTTGCCCTACCTCTCCCTCCCCTGTTCC
GACGCGGCGGCCGGTGAGCACCTGCCCGGTCGCTAGCTTCTGCCATGGCTCACGAAGTTG
GCGACAACGGCGGCGAACTCCCGCCGCCCGCGAAGAAGAAGTCGCCCGCCGAGGAGGAGG
CCGAGAAGAGGAGGAAGAAGCTTACACCTGGGAGCTTGATGAAGGGCATCATACGGTCTG
GGAGTGGTGATGCCACCCCTGCAGAGGGCGATCAGGTTATACTTCATTGCACTACTCGGA
CGATGGATGGTATTATTGTCAATTCTACAAGAAGGGAGCACGGAGGTAAAGGAATCCCAC
TCAGATTTGTTTTAGGGAAGAGCAAGATGATCCTAGGCTTTGCTGAAGGCTTCCCAACAA
TGCTGAAGGGTGAAATTGCTATGTTCAAAATGCAGCCTAAAATTCACTACGCTGAGGTTG
ATTGTCCAGTTGCAGCTCCAGATGGCTTCCCGAAAGATGATGAACTTCAATTTGAGATTG
AAATGTTGGATTTCTTTAAAGCCAAGGTTGTGGCAGAGGATTTGGGGGTGGTAAAGAAGA
TAGTTGAAGAAGGCAAGGGATGGGAAACACCTAGAGAGCCATATGAAATAACAGCACGGA
TAACTGTAAGAACAGCAGATGGAAAAGAAATTATTCCAAGTAAAGAAGAGGCATATTTCT
TTACTATTGGTAAATCTGAGGTACCTAAAGGGCTTGAAATGGGCATTGGAACAATGGCTC
GCAAGGAAAAGGCAATTGTTTTTGTTAGCAATACTTATTTGACGAAGTCCTCACTAATGC
CAGAGCTTGAAGGCCTTGAAGAAGTTCATTTTTACATTGAATTGGTTCAGTTTATCCAGG
TGAGAGACATGCTTGGTGATGGTCGTCTAATAAAACGACGTGTAGTTGATGGAAAAGGTG
AATTTCCAATGGACTGTCCTCTTCATGACAGCTTATTAAGAGTGCATTATAAGGGTATTC
TCCTTGATGAACCAAAGTCAGTGTTTTATGATACACGTGCCGATAATGATGGTGAACCGT
TGGAATTCTGTTCCGGAGAAGGCTTGGTTCCAGAGGGATTTGAAATGTGTGTTCGGCTAA
TGCTTCCTGGTGAAAAATCTGTTGTCACCTGCCCACCAGATTTTGCATATGATAAGTTCC
CAAGGCCAGCAAATGTTCCTGAAGGAGCTCATGTTCAGTGGGAAATTGAACTACTTGGGT
TTGAAATGCCCAAGGATTGGACTGGCTTAACTTTCGAAGAAATCATGGATGAGGCAGACA
AAATAAAGAACACGGGTAACAGACTGTTTAAAGAAGGAAAGTTCGAACTTGCAAAGGCGA
AATATGATAAGGTGCTTAGGGAATATAACCACGTGCATCCTCATGATGATGAAGAGGGAA
AAATCTTTGCTAATTCAAGAAATTCCCTACATCTAAATGTAGCTTTTTGCTACCAGAAGA
TGGGTGAATACAGAAAATCCATTGAAACATGCAATAAGGTGCTGGACACAAATCCTGTGC
ATGCGAAAGCTCTTTACCGCCAAGGAATGTCCTACATGTTACTCGGGGAATTTGATGATG
CGAGGAATGATTTTGAGAAGATGATTACCGTTGACAAGTCATCAGAACCGGACGCTACAG
CTGCCCTCCTTAAACTTAAGCAGAAGGAACAGGAAGCTGAAAAGAAGGCGAGGAAGCAGT
TCAAAGGGCTCTTTGACAAGAAGCCGGGAGAGATATCTGAAGTTGGTGTAGAATCAGAGG
GTGGAAAGGATGCGGGTGATGCAAGGGGCTCTGGTGAGGCAACAAGTGCTGATAGAGGTG
CAAATACAATGGATAGTCCGACCAGAGAATCAGAGTACGCATTCGAGGAAGAGAGGCCTG
GGCTTCTTGGCCGCTTGTGGCCTTCTGCGAGGAGGATCTTCTCGTCTGTTGGCATAAACA
GGTGTACAATACTATAAGGTGTTTAATTCCTACTAGGGTGACTTTGGAAATCATGGTGGT
GAAGATGAACTGCCCCGAGGTTTGTGGTGTTTATTAGAGTTTCCTGACGACGAAAAAAAT
GAACCGTGTGCATGATAATGTAAAAAATGAGAAATAAATTGCAGGGAATTTTATTCGTAG
TTTGGAT