Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029264_T016
CDS Infomation	cds chromosome:B73_RefGen_v4:1:64208211:64216509:1 gene:Zm00001d029264 gene_biotype:protein_coding transcript_biotype:protein_coding description:CDPK-related kinase 1
Sequence	ATGGGCCTCTGCCTGGGCAAGTCGGCAGCGGTCCAGGAGCCGGCGGTGGCGGAAGACAAC AGCGTAGCCGATGGCGCGGCGGCGGGCTGCGGCGATGGGCCGCCCGTGAAGGCGCCTCGG ACGCCCAAGCAGCCCAAGTTCTCCTTCTACCTGCCGAGCCCGCTCCAGCCCTCCAGCTAC AAGGGCTCGCCGGCCAACTCCAGCGCCGCGTCCACGCCGGCGCGCGGCGGGTTCAAGCGC CCATTCCCGCCGCCGTCGCCTGCCAAGCACATCCGTGCGCTGCTGGCGCGGCGCCACGGC TCGGTCAAGCCTAACGAGGCGTCCATCCCCGAAGGCGGCGAGCTGGACCTGGGGCTGGAC AAGAGCTTCGGCTACTCCAGGCACTTCGCGGCCAAGTACGACCTTGGCCGGGAGGTGGGG CGCGGCCACTTTGGCTTCACCTGCGCTGCCAAGTGCAAGAAGGGCGAGCTCAAGGGGGAG GACGTCGCCGTCAAGGTCCTTCCCAAGGCCAAGATGACTACTGCTATTGCCATTGAAGAT GTCAGACGAGAAGTCAGAATATTGAGTTCTTTGGCAGGCCACATTAACCTAGTGCAATTT TATGATGCTTTTGAGGATGAAGAAAATGTATATGTTGTTATGGAATTATGCAAAGGAGGT GAACTGCTGGACAGAATTTTGGCTAGAGGTGGCAAATATTCTGAGGGCGATGCTAAGGTT ATTATTCACCAAATTCTAAGTGTTGCTTCATTTTGTCATCTTCAGGGTGTTGTTCACCGG GATCTGAAACCAGAGAATTTTCTTTTCATGTCAAAGGATGAGAATTCTGCCTTGAAAGTC ATAGACTTTGGTTTGTCTGACTTTGTTAAACCAGATGACAGACTTAATGACATTGTTGGA AGTGCATATTATGTTGCTCCTGAAGTTCTCCATCGATCTTATGGCACAGAGGCTGATATG TGGAGCATTGGAGTAATTGCATATATTTTGCTTTGTGGAAGCCGCCCTTTCTGGGCACGA ACTGAGTCAGGAATTTTTCGAGCTGTCCTAAAAGCAGAGCCTAGTTTTGATGAAATTCCA TGGCCTACCCTTTCTGCTGAGGCGAAAGACTTTGTAAGAAGGCTACTCAATAAGGATTAC CGTAAGCGGATGACTGCTGCACAAGCCCTCTGCCATCCATGGATCCGTGGCACACAGGAA GTTAAGATTAATCTAGACATGATAATCTACAGGCTTATGAGGGCTTACATAAGTTCATCT TCTCTACGGAAATCTGCATTGAGGGCTCTTGCAAAGGCACTGACGACAGATCAACTCTTC TACCTAAGAGAGCAGTTTACATTATTAGGTCCAAACAAGAGTGGCCATATATCATTGCAA AATATGAAGACGGCCTTGATTAAAAATTCCTCGGGTGCAATGAATGATTCTAGGATTCTT GACTTTGTTAACTCAATATGCAATATCCAATATGGCATGATTGATTTTGAAGAGTTCTCT GCTGCGGCCATTAGTGTATATCAAATGGAGGGCCTGGAGACCTGGGAAGAACATGCTCAA CAAGCATATGAATTGTTTGACAAGGAGGGCAACCGACCAATTGTGATTGAAGAACTTGCA TCGGAACTTGGACTTGGCCCTTCGATCTCACTTCATGTTGTTCTCAAAGATTGGATCAGA CATTCAGATGGAAACCTCAGTTTCCTCGGGTTCATAAAACTACTGCATGGAGTTTCTTCA CGCGCAATCACCAAAGTATAA

Peptide Sequence

PEP ID	Zm00001d029264_P016
PEP Infomation	pep chromosome:B73_RefGen_v4:1:64208211:64216509:1 gene:Zm00001d029264 transcript:Zm00001d029264_T016 gene_biotype:protein_coding transcript_biotype:protein_coding description:CDPK-related kinase 1
Sequence	MGLCLGKSAAVQEPAVAEDNSVADGAAAGCGDGPPVKAPRTPKQPKFSFYLPSPLQPSSY KGSPANSSAASTPARGGFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGGELDLGLD KSFGYSRHFAAKYDLGREVGRGHFGFTCAAKCKKGELKGEDVAVKVLPKAKMTTAIAIED VRREVRILSSLAGHINLVQFYDAFEDEENVYVVMELCKGGELLDRILARGGKYSEGDAKV IIHQILSVASFCHLQGVVHRDLKPENFLFMSKDENSALKVIDFGLSDFVKPDDRLNDIVG SAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKAEPSFDEIP WPTLSAEAKDFVRRLLNKDYRKRMTAAQALCHPWIRGTQEVKINLDMIIYRLMRAYISSS SLRKSALRALAKALTTDQLFYLREQFTLLGPNKSGHISLQNMKTALIKNSSGAMNDSRIL DFVNSICNIQYGMIDFEEFSAAAISVYQMEGLETWEEHAQQAYELFDKEGNRPIVIEELA SELGLGPSISLHVVLKDWIRHSDGNLSFLGFIKLLHGVSSRAITKV

Transcript Sequence

Transcript ID	Zm00001d029264_T016
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:64208211:64216509:1 gene:Zm00001d029264 gene_biotype:protein_coding transcript_biotype:protein_coding description:CDPK-related kinase 1
Sequence	GCAACGGAAAGCAACCCAAGGTCTCTCCTTTTCCGCCACACAGGACTCACGCGCTCTTCA ATCGCTCGCTCCGTTTCTACCTCCTCTCGCCTTCCTTCCTTCCTTCGATCCCGCTTTGTT TGTCGTCATCGCCCGCCCCCGAAGCTCCGACCTTTCCCCCACTTTCCCTTGGCGTCTACG GCCTTGTCCGGTGTAGAAAACAACGGGTTTCGTTTGTGTTGTTTTGCTGCGGTTTTTGTC CGCTCCTGGGAGTTCAATCCCTGCTCCATCTCTTAAGAGCACTCCTCCCCTCCCACTCAG TGTGCTTTGCTGTTCACTTTGGATTCCGCGGCTTTGTTTCGGGTTCTTGATTAGGAAGGT TCGGTTCCTGGTTTGGGAAGGTCCCCCTTCCGAGGCGAGGAATTTGGTGCGGGTTGATGC GTCTTGCCAGGAATCCGCGATGCAATGATAGGTTGTTGAAGCCGAGGTGAATCTTTGACC TGCAGAATTTCCTAGCTGAAGTCCCACCGCTTCTCGATCAGCCGGGCGCCATGGGCCTCT GCCTGGGCAAGTCGGCAGCGGTCCAGGAGCCGGCGGTGGCGGAAGACAACAGCGTAGCCG ATGGCGCGGCGGCGGGCTGCGGCGATGGGCCGCCCGTGAAGGCGCCTCGGACGCCCAAGC AGCCCAAGTTCTCCTTCTACCTGCCGAGCCCGCTCCAGCCCTCCAGCTACAAGGGCTCGC CGGCCAACTCCAGCGCCGCGTCCACGCCGGCGCGCGGCGGGTTCAAGCGCCCATTCCCGC CGCCGTCGCCTGCCAAGCACATCCGTGCGCTGCTGGCGCGGCGCCACGGCTCGGTCAAGC CTAACGAGGCGTCCATCCCCGAAGGCGGCGAGCTGGACCTGGGGCTGGACAAGAGCTTCG GCTACTCCAGGCACTTCGCGGCCAAGTACGACCTTGGCCGGGAGGTGGGGCGCGGCCACT TTGGCTTCACCTGCGCTGCCAAGTGCAAGAAGGGCGAGCTCAAGGGGGAGGACGTCGCCG TCAAGGTCCTTCCCAAGGCCAAGATGACTACTGCTATTGCCATTGAAGATGTCAGACGAG AAGTCAGAATATTGAGTTCTTTGGCAGGCCACATTAACCTAGTGCAATTTTATGATGCTT TTGAGGATGAAGAAAATGTATATGTTGTTATGGAATTATGCAAAGGAGGTGAACTGCTGG ACAGAATTTTGGCTAGAGGTGGCAAATATTCTGAGGGCGATGCTAAGGTTATTATTCACC AAATTCTAAGTGTTGCTTCATTTTGTCATCTTCAGGGTGTTGTTCACCGGGATCTGAAAC CAGAGAATTTTCTTTTCATGTCAAAGGATGAGAATTCTGCCTTGAAAGTCATAGACTTTG GTTTGTCTGACTTTGTTAAACCAGATGACAGACTTAATGACATTGTTGGAAGTGCATATT ATGTTGCTCCTGAAGTTCTCCATCGATCTTATGGCACAGAGGCTGATATGTGGAGCATTG GAGTAATTGCATATATTTTGCTTTGTGGAAGCCGCCCTTTCTGGGCACGAACTGAGTCAG GAATTTTTCGAGCTGTCCTAAAAGCAGAGCCTAGTTTTGATGAAATTCCATGGCCTACCC TTTCTGCTGAGGCGAAAGACTTTGTAAGAAGGCTACTCAATAAGGATTACCGTAAGCGGA TGACTGCTGCACAAGCCCTCTGCCATCCATGGATCCGTGGCACACAGGAAGTTAAGATTA ATCTAGACATGATAATCTACAGGCTTATGAGGGCTTACATAAGTTCATCTTCTCTACGGA AATCTGCATTGAGGGCTCTTGCAAAGGCACTGACGACAGATCAACTCTTCTACCTAAGAG AGCAGTTTACATTATTAGGTCCAAACAAGAGTGGCCATATATCATTGCAAAATATGAAGA CGGCCTTGATTAAAAATTCCTCGGGTGCAATGAATGATTCTAGGATTCTTGACTTTGTTA ACTCAATATGCAATATCCAATATGGCATGATTGATTTTGAAGAGTTCTCTGCTGCGGCCA TTAGTGTATATCAAATGGAGGGCCTGGAGACCTGGGAAGAACATGCTCAACAAGCATATG AATTGTTTGACAAGGAGGGCAACCGACCAATTGTGATTGAAGAACTTGCATCGGAACTTG GACTTGGCCCTTCGATCTCACTTCATGTTGTTCTCAAAGATTGGATCAGACATTCAGATG GAAACCTCAGTTTCCTCGGGTTCATAAAACTACTGCATGGAGTTTCTTCACGCGCAATCA CCAAAGTATAAGATAACCATTTGCATCGAGCAATCCCTGATCTCTGGCTAGTGCATGCCA TGGCTGGTTGTAGAAGTTGCATGAAACCAATACAAAGATTAACAGATCATCTTAGCGCAA TAGGTACTCTCAGTAGGTGTATATTTGCCCTGCTTTTCGCAACATGGATCGACATTGTCC TCAAGATGTTGAGAGGAATGTACAGATTTGATTTGGGAAGAATGGAAACCCTGAAGGATT TGAGGCTGTTATTTTGTTTGTTAGTTCCAGTAATGCAGGCATTGCCTTCATTTGTGTTGT GCACCTATGCCGCTTAATGCTCCATTTACATATGCTATTGTTGCATTTATTATATAAATA TTCTAGAATGAGAG