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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029214_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:1:62510872:62516047:-1 gene:Zm00001d029214 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAF type zinc finger domain containing 1

Sequence

ATGGCAGCGGCCGCCGCCGATTCCGACACCGCCGCAGCTGTGGGCGCCATGTCCACCTGC
GCCCACTGTCAGCGAGAAATCCCATTTTTGAACATCGACTTGCACTCTGTACATTGCGCC
CGCAACCTCCAAAAGTGCCAGCACTGCGGCGAAATGATTCCTAGGAAACTTATGGATGAA
CATTATGATGAAAACCATGCCCCGATCAATTGCTCCCTTTGTAAAGAAACAATAGAACGT
GAGAGCTGGGATCTTCATAAAGGTGAAAAGTGCCCACAAAGAATTGTCGCTTGTGAATAT
TGCGAGTTTGAATTGCCTGCAGTTGATCTCCATGAACATCAGAGCTTTGCCAAACATGCA
GGAAGTATATTAGACTGCGTGAATGGACAGGGCACGAAATACAGTGCCATACAAACTCAA
ATGGTTCTGCAGACACATCCCGATCAATGTCTTTCAACTGCCAGAGCAATTCCAGAGAGA
GAACTACGACCGCCGCCGCCGCCAGTGCGACAGGCGCGACCAGCACGTCCTGCCCACGCT
TCACCACACAAGCGGCTCCTCTTCACAATCGCCGTCACTGGAATAGCAGTTATGATCGGC
TCCATACTGTTCCAGAGGGACGAGGGTTTCTAG

Peptide Sequence

PEP ID

Zm00001d029214_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:1:62510872:62516047:-1 gene:Zm00001d029214 transcript:Zm00001d029214_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAF type zinc finger domain containing 1

Sequence

MAAAAADSDTAAAVGAMSTCAHCQREIPFLNIDLHSVHCARNLQKCQHCGEMIPRKLMDE
HYDENHAPINCSLCKETIERESWDLHKGEKCPQRIVACEYCEFELPAVDLHEHQSFAKHA
GSILDCVNGQGTKYSAIQTQMVLQTHPDQCLSTARAIPERELRPPPPPVRQARPARPAHA
SPHKRLLFTIAVTGIAVMIGSILFQRDEGF

Transcript Sequence

Transcript ID

Zm00001d029214_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:62510872:62516047:-1 gene:Zm00001d029214 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAF type zinc finger domain containing 1

Sequence

ACGCCTGACCGCCCCCCTCCTCGCCTAATCTACCCACCACCCGGCCACCCGTCTCGCCCT
CTCATAAATTCTCTCTCGCTGCCCACCGATCAACCACCCCGCTTCCCCCGACCGCGTCTC
GGAGCACCCTTCTCAACCGCATCCTGCCTCTGCTCGGTGTCGCCGTCTCGACTGCAGGAG
AGGGGAGCGCCCCGTCGCCGATCTGATCGGGAGCCGGAGGCCAAGCGTCGAGGTGAGCCC
GTCAGGAACCGCCATGGCAGCGGCCGCCGCCGATTCCGACACCGCCGCAGCTGTGGGCGC
CATGTCCACCTGCGCCCACTGTCAGCGAGAAATCCCATTTTTGAACATCGACTTGCACTC
TGTACATTGCGCCCGCAACCTCCAAAAGTGCCAGCACTGCGGCGAAATGATTCCTAGGAA
ACTTATGGATGAACATTATGATGAAAACCATGCCCCGATCAATTGCTCCCTTTGTAAAGA
AACAATAGAACGTGAGAGCTGGGATCTTCATAAAGGTGAAAAGTGCCCACAAAGAATTGT
CGCTTGTGAATATTGCGAGTTTGAATTGCCTGCAGTTGATCTCCATGAACATCAGAGCTT
TGCCAAACATGCAGGAAGTATATTAGACTGCGTGAATGGACAGGGCACGAAATACAGTGC
CATACAAACTCAAATGGTTCTGCAGACACATCCCGATCAATGTCTTTCAACTGCCAGAGC
AATTCCAGAGAGAGAACTACGACCGCCGCCGCCGCCAGTGCGACAGGCGCGACCAGCACG
TCCTGCCCACGCTTCACCACACAAGCGGCTCCTCTTCACAATCGCCGTCACTGGAATAGC
AGTTATGATCGGCTCCATACTGTTCCAGAGGGACGAGGGTTTCTAG