Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029211_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:1:62490456:62493852:1 gene:Zm00001d029211 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidylinositol 4-phosphate 5-kinase 6
Sequence

ATGCTGAACCTGCAGCTCGGCATCAGGCACGCAGTAGGAAAGCAAGGCCCAATTACACTT
GATCTCAAGTCATCAGCATTCGACCCCAAGGAGAAAGTATGGACAAGGTTCCCACCGGAA
GGCTCGAAATACACTCCTCCACACAGTTCGTGCGACTTCAGATGGAAGGACTACTGCCCG
CAAGTATTCCGGACGTTGCGCAAGCTGTTCAAGGTCGATGCCGCGGACTACATGCTGTCT
CTCTGTGGAGACCAGGCTCTCCGGGAGCTCTCGTCTCCGGGCAAGAGTGGGAGCTTCTTC
TATCTCACGAGCAACGACCAGTACATGATCAAGACGATGAAGAAATCTGAAGTGAAGATA
TTTCTGAAGATGATTCGAGCTTATTACAACCATGTCAGAGCGTTCGAGAGCACTCTGGTC
ACCAAGTTCTTCGGTCTTCACTGTGTCAAGTTAGCTGGAGCGAACCAAAAGAAGGTCCGT
TTTGTCATAATGGGAAACCTGTTCTGCTCCGACTACTCCATCCATAGGCGGTTTGACCTG
AAAGGTTCGTCACTGGGACGGACGACGGATAAGCCACAGACGGAGATTGACGAGTACACT
ACCCTGAAGGATCTTGATCTTAACTTCGTGTTCCGGTTGCAAAAGCACTGGTACCAGGAG
TTCCAAAGACAGGTCGACAGGGACTGCGAGTTTCTGGAGCAGGAAAATATCATGGACTAT
AGTCTTCTGGTTGGTGTACATTTTAGGGACACTAGGGATAGGCTATTGACCGGAGGTTCA
TTCGATAGCGACTGCAGCAGAGGATCGTCGCCTCACTTGTCTCGAGGAGATACGGATCCA
AACAGGTTAGCCAAGATAAAACTTGGGTCTAACATGCCGACGAGAGCCGAACGGACGATA
CGAAAGGGTGACTGTGAGGTGCAGATCATGGGAGAGCCTACGGGGGAGTTGTACGATGTC
ATACTGTACTTCGGGATCATAGACATCCTCCAGGACTACGACATCAGCAAGAAGCTCGAG
CACGCGTACAAGTCCTTCCAGTACGACCCGACGTCCATTTCGGCGGTGGATCCGAAGCAG
TACTCGAGGCGCTTCAGGGATTTCGTGTTCAAAGCGTTCCAGGAAGACAGGTTCGACTTG
TGA

Peptide Sequence

PEP ID

Zm00001d029211_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:1:62490456:62493852:1 gene:Zm00001d029211 transcript:Zm00001d029211_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidylinositol 4-phosphate 5-kinase 6
Sequence

MLNLQLGIRHAVGKQGPITLDLKSSAFDPKEKVWTRFPPEGSKYTPPHSSCDFRWKDYCP
QVFRTLRKLFKVDAADYMLSLCGDQALRELSSPGKSGSFFYLTSNDQYMIKTMKKSEVKI
FLKMIRAYYNHVRAFESTLVTKFFGLHCVKLAGANQKKVRFVIMGNLFCSDYSIHRRFDL
KGSSLGRTTDKPQTEIDEYTTLKDLDLNFVFRLQKHWYQEFQRQVDRDCEFLEQENIMDY
SLLVGVHFRDTRDRLLTGGSFDSDCSRGSSPHLSRGDTDPNRLAKIKLGSNMPTRAERTI
RKGDCEVQIMGEPTGELYDVILYFGIIDILQDYDISKKLEHAYKSFQYDPTSISAVDPKQ
YSRRFRDFVFKAFQEDRFDL

Transcript Sequence

Transcript ID

Zm00001d029211_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:62490456:62493852:1 gene:Zm00001d029211 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidylinositol 4-phosphate 5-kinase 6
Sequence

GACGAAGACGACGACGAGGGGGCGCGCCGCGACGCCGGCGGTCGGCGCGGGCCGCGGCGG
CAGGGCGAGACCATAGCCAAGGGCCACAAGAACTACGAGCTCATGCTGAACCTGCAGCTC
GGCATCAGGCACGCAGTAGGAAAGCAAGGCCCAATTACACTTGATCTCAAGTCATCAGCA
TTCGACCCCAAGGAGAAAGTATGGACAAGGTTCCCACCGGAAGGCTCGAAATACACTCCT
CCACACAGTTCGTGCGACTTCAGATGGAAGGACTACTGCCCGCAAGTATTCCGGACGTTG
CGCAAGCTGTTCAAGGTCGATGCCGCGGACTACATGCTGTCTCTCTGTGGAGACCAGGCT
CTCCGGGAGCTCTCGTCTCCGGGCAAGAGTGGGAGCTTCTTCTATCTCACGAGCAACGAC
CAGTACATGATCAAGACGATGAAGAAATCTGAAGTGAAGATATTTCTGAAGATGATTCGA
GCTTATTACAACCATGTCAGAGCGTTCGAGAGCACTCTGGTCACCAAGTTCTTCGGTCTT
CACTGTGTCAAGTTAGCTGGAGCGAACCAAAAGAAGGTCCGTTTTGTCATAATGGGAAAC
CTGTTCTGCTCCGACTACTCCATCCATAGGCGGTTTGACCTGAAAGGTTCGTCACTGGGA
CGGACGACGGATAAGCCACAGACGGAGATTGACGAGTACACTACCCTGAAGGATCTTGAT
CTTAACTTCGTGTTCCGGTTGCAAAAGCACTGGTACCAGGAGTTCCAAAGACAGGTCGAC
AGGGACTGCGAGTTTCTGGAGCAGGAAAATATCATGGACTATAGTCTTCTGGTTGGTGTA
CATTTTAGGGACACTAGGGATAGGCTATTGACCGGAGGTTCATTCGATAGCGACTGCAGC
AGAGGATCGTCGCCTCACTTGTCTCGAGGAGATACGGATCCAAACAGGTTAGCCAAGATA
AAACTTGGGTCTAACATGCCGACGAGAGCCGAACGGACGATACGAAAGGGTGACTGTGAG
GTGCAGATCATGGGAGAGCCTACGGGGGAGTTGTACGATGTCATACTGTACTTCGGGATC
ATAGACATCCTCCAGGACTACGACATCAGCAAGAAGCTCGAGCACGCGTACAAGTCCTTC
CAGTACGACCCGACGTCCATTTCGGCGGTGGATCCGAAGCAGTACTCGAGGCGCTTCAGG
GATTTCGTGTTCAAAGCGTTCCAGGAAGACAGGTTCGACTTGTGAAGGGACGCGTGGGAA
GCTCGATCGGGAGGCTACCGTTGCCGCTGACACGGGTTAACCAGTGTTGAGATCCGCACT
GCAGCAGAGCTTTTGGTGACCCTACTTCCACTTGCACTCGCCGGATTGATGAAGCTCCTG
CATGCATTGCATGCGGAGTCTCCAAGGGGATTTCAGCTGGCACTCATGCATTCAAGTAAA
GGCTCCAATTCGAGATACCGGTGCGTTTCAATAAGCAGGTTCAACAGTATCTTTCATTAC
AAAAAAAACAGCTCTGCTTAAAAAAACATACGTGCATATAGAAACCACTGATATTAGTGT
AGACGCTGACAACCTACGGAGAAATTTGTAATTGCAGTTCAGGGATGTAAATCTTTTTAC
GAG