Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029194_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:61729759:61733298:-1 gene:Zm00001d029194 gene_biotype:protein_coding transcript_biotype:protein_coding description:cytochrome P450 family 81 subfamily D polypeptide 8
Sequence

ATGGACGTTGCCTTAAGCACCATTGTGTTTGTCATCGCCGTTTTCATCCCGGCACTGCTG
ACGCTGGTGCAAAGAAGCCGTAGCCGGCACGCCGGCCATAACCCACCACCTCCGCCAGAG
CCCAGAGCCATTCCCCTGGTCGGCCACCTCCACCACCTCCTGAGAAAGAAGCCACTCCAC
CGCACCCTCGCCCACCTCGCTGAGCGCCATGGAGACGTCCTGGGCCTCCGGTTCGGTTCC
AGCCGAGTCGCAGTTGTGTCCTCTGCCTCAGTCGCCCAGCAGTGCCTTGTCGCACTGGAC
ACCTCGTTCGGCAACCGTCCACGGCTGCCGTCCGCGAGGATCCTCTCCTATGAGTGGTCG
ACCATGGGCCATTCCAACTGCGGGCCGTACTGGCGCCAAGCTCGGCGCACCACCAGCACG
GAGTTCTCCTCCGTGGAACGAGTGCAGCACTTCGCTGATGTCCACGAGCAGGAGGCGCGG
GCCATGGCACGCCGCCTTTGTCGTGTGGCACATGCTTCTGGGGGACGCGCTCTTGTAGAC
GTCAAGTCGCGACTGTTGGAGATGCTAATGAACGGCTTACTGGACATGCTCTTCAAGAGG
ACAACCTCTCGGAGTTGGAGTAGTGACGAAAAGGACGAGGCCGTGGAAGTGAGCGAGGAG
GCCCGATGCTTCATGGCCATGGCGGAGGAGACGATGGAGCTGACGCTGACGGTGTGGGAC
TTCCTGCCGCCACTGGCGCGGTGGCTGGACGTCGACGCGGTGGGCCGCCGGTTGCAGCGA
CTGCAAGCAAACAGGACGGAGTTTTTGCAGAGGTTGATCGAGGAACACAAGGAGATGGAG
AAGGGCGGTCAAGTCACACGCAGGACGTTGGTCGGGGTGATGCTGGAGCTGCAGGACAAG
GATCCCGAAGCCTACACGGATCAGCTCATCCGCTCCTTGTGTGTTAGTGCACTCGAAGCT
GGGACGCTCAGTACAGGCTATACAATTGAGTGGGTGATGTCTCTCTTGCTAAACAACCCT
CACATCATGAAGAAAGCTCGCGACGAAATTGACGCATGCGTCGGGGAACCCAAACGCCTA
CTGGACGCGACTGATCTCCCAAAGCTGCCGTACCTTCGATGCATCATCCTGGAGACGCTT
CGGCTGTACCCTGTGGTACCCCTTCTAGTTCCTCGTGAATCATCTACCAACTGCACGGTC
AACGGGTTTAATATCGCCAAAGGAACGATGCTTCTTGTGAATACGTTTGCTATCCATAGG
GACCCTAGGACATGGGATGACCCAGAAACCTTCCTCCCGGAAAGGTTTGAGGATGGCAGT
AACCAAGCAGGGAAGACGACGACGACGACCGATCTGTCGTTTGGCATGGGGAGACGACGC
TGCCCAGCAGAGAACCTGGGGATGCAGTTGGCAGGCATTGCTTTGGGGACTATGATCCAG
TGCTTCAACTGGGAACGAGTGGGCACGGAGCTTGTGGACATGGCTGAGGGCTCTGGCCTA
ACCATGTCAAAGAAGGTTCCTTTGGAGGCCTTCTGTCAACCTCGTGCTTCTATGGTCGAT
CTCCTTGCAAACATCTAG

Peptide Sequence

PEP ID

Zm00001d029194_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:61729759:61733298:-1 gene:Zm00001d029194 transcript:Zm00001d029194_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:cytochrome P450 family 81 subfamily D polypeptide 8
Sequence

MDVALSTIVFVIAVFIPALLTLVQRSRSRHAGHNPPPPPEPRAIPLVGHLHHLLRKKPLH
RTLAHLAERHGDVLGLRFGSSRVAVVSSASVAQQCLVALDTSFGNRPRLPSARILSYEWS
TMGHSNCGPYWRQARRTTSTEFSSVERVQHFADVHEQEARAMARRLCRVAHASGGRALVD
VKSRLLEMLMNGLLDMLFKRTTSRSWSSDEKDEAVEVSEEARCFMAMAEETMELTLTVWD
FLPPLARWLDVDAVGRRLQRLQANRTEFLQRLIEEHKEMEKGGQVTRRTLVGVMLELQDK
DPEAYTDQLIRSLCVSALEAGTLSTGYTIEWVMSLLLNNPHIMKKARDEIDACVGEPKRL
LDATDLPKLPYLRCIILETLRLYPVVPLLVPRESSTNCTVNGFNIAKGTMLLVNTFAIHR
DPRTWDDPETFLPERFEDGSNQAGKTTTTTDLSFGMGRRRCPAENLGMQLAGIALGTMIQ
CFNWERVGTELVDMAEGSGLTMSKKVPLEAFCQPRASMVDLLANI

Transcript Sequence

Transcript ID

Zm00001d029194_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:61729759:61733298:-1 gene:Zm00001d029194 gene_biotype:protein_coding transcript_biotype:protein_coding description:cytochrome P450 family 81 subfamily D polypeptide 8
Sequence

GTGAAATGAACTAGACCAATTTCCTTGCAGAGAGTGTTTTGGCGATGGACGTTGCCTTAA
GCACCATTGTGTTTGTCATCGCCGTTTTCATCCCGGCACTGCTGACGCTGGTGCAAAGAA
GCCGTAGCCGGCACGCCGGCCATAACCCACCACCTCCGCCAGAGCCCAGAGCCATTCCCC
TGGTCGGCCACCTCCACCACCTCCTGAGAAAGAAGCCACTCCACCGCACCCTCGCCCACC
TCGCTGAGCGCCATGGAGACGTCCTGGGCCTCCGGTTCGGTTCCAGCCGAGTCGCAGTTG
TGTCCTCTGCCTCAGTCGCCCAGCAGTGCCTTGTCGCACTGGACACCTCGTTCGGCAACC
GTCCACGGCTGCCGTCCGCGAGGATCCTCTCCTATGAGTGGTCGACCATGGGCCATTCCA
ACTGCGGGCCGTACTGGCGCCAAGCTCGGCGCACCACCAGCACGGAGTTCTCCTCCGTGG
AACGAGTGCAGCACTTCGCTGATGTCCACGAGCAGGAGGCGCGGGCCATGGCACGCCGCC
TTTGTCGTGTGGCACATGCTTCTGGGGGACGCGCTCTTGTAGACGTCAAGTCGCGACTGT
TGGAGATGCTAATGAACGGCTTACTGGACATGCTCTTCAAGAGGACAACCTCTCGGAGTT
GGAGTAGTGACGAAAAGGACGAGGCCGTGGAAGTGAGCGAGGAGGCCCGATGCTTCATGG
CCATGGCGGAGGAGACGATGGAGCTGACGCTGACGGTGTGGGACTTCCTGCCGCCACTGG
CGCGGTGGCTGGACGTCGACGCGGTGGGCCGCCGGTTGCAGCGACTGCAAGCAAACAGGA
CGGAGTTTTTGCAGAGGTTGATCGAGGAACACAAGGAGATGGAGAAGGGCGGTCAAGTCA
CACGCAGGACGTTGGTCGGGGTGATGCTGGAGCTGCAGGACAAGGATCCCGAAGCCTACA
CGGATCAGCTCATCCGCTCCTTGTGTGTTAGTGCACTCGAAGCTGGGACGCTCAGTACAG
GCTATACAATTGAGTGGGTGATGTCTCTCTTGCTAAACAACCCTCACATCATGAAGAAAG
CTCGCGACGAAATTGACGCATGCGTCGGGGAACCCAAACGCCTACTGGACGCGACTGATC
TCCCAAAGCTGCCGTACCTTCGATGCATCATCCTGGAGACGCTTCGGCTGTACCCTGTGG
TACCCCTTCTAGTTCCTCGTGAATCATCTACCAACTGCACGGTCAACGGGTTTAATATCG
CCAAAGGAACGATGCTTCTTGTGAATACGTTTGCTATCCATAGGGACCCTAGGACATGGG
ATGACCCAGAAACCTTCCTCCCGGAAAGGTTTGAGGATGGCAGTAACCAAGCAGGGAAGA
CGACGACGACGACCGATCTGTCGTTTGGCATGGGGAGACGACGCTGCCCAGCAGAGAACC
TGGGGATGCAGTTGGCAGGCATTGCTTTGGGGACTATGATCCAGTGCTTCAACTGGGAAC
GAGTGGGCACGGAGCTTGTGGACATGGCTGAGGGCTCTGGCCTAACCATGTCAAAGAAGG
TTCCTTTGGAGGCCTTCTGTCAACCTCGTGCTTCTATGGTCGATCTCCTTGCAAACATCT
AGAGCTGCTATATATACAAGTTGCACTACCAAGACAATGCAAGCACACGTCATTATGAAT
TCTCGTTGTTATTACAGAATAAGTCAAAAGCTCTGCTGCTTTTATATAAAATCACCCTAG
CTATGTATGCATGTATGTTCATGTAGAAACCTGCTATCAAATAATATGTGTCCTGTACAG
CCTCATATAGCATGAAATAAAAGTATACTGTGAAACATAGACCTATGTGTATGTAGT