Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029165_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:1:60879723:60888261:-1 gene:Zm00001d029165 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TUB-transcription factor 11 description:Tubby protein
Sequence	ATGTCTTTCAGGAGCCTGATTCAGGACATGAAGGACGAGTTCGGGAGCATCTCGCGGCAT AGCCTGCGGTCCCGGTCTCACCGCTCCGCCGGGAACGCGGCGCGGGCGGCGGCCGCGGGA CCGTCGGAGGCGATGGATCAGAGCTGCTGGTCGCAGCTGCCCCCCGAGCTCCTGCGGGAG GTGCTGGTGAGGATCGAGGCATCGGAGAGCTGGTGGCCAGCGCGCAAGAACGTGGTGTCA GGCGCCGGCGTCTGCCGGACCTGGAGGGGCATCATGAAGGAGGCCGTGCGCGTCCCGGAG GTGTCAGGGAAGCTCACGTTCCCCATCTCACTTAAGCAGCCTGGCCCAAGGGATGGCACT CTTAAATGTTTCATCAGGAGAAATCGAACTACTCAGACATATTATCTGTATATTGGATTG ACAGAAGCATTGGCTGATGATGGGAAGTTTCTACTTGCTGCACGCAAGTGTCGTAAGCCC ACCTGCACAGACTACCTAATTTCTCTTGATAAGGTCGATATGTCAAAGGGAAGCAGCACC TATATTGGCAAGCTAAGATCAAATTTCCTTGGAACAAAGTTCACTGTCTATGATGCTCAT CCACCATATGATGGTGCTGCGGTCTCAAAGAGTCGCTCTGCACGTGTGGTTGGTTTGAAG CAGGTCTCCCCTAGAGTTCCGGCTGGAAATTATCCCGTTTCACATATTTCTTACGAGCTA AATGTTCTGGGCTCCAGAGGTCCAAGAAGGATGAACTGTGTTATGGATTCCATCCCTGCA TCAGCTGTTAAGGAAGGAGGGAAAACTCCTACACAGACTGAATTTCCACTTAGCAGCCTT GACTCTTTCCCATCATTTCCATTCTTCAGATCTAAATCAGCTCGGATAGACAGTTCAACG TCGCAATCATCCAGTCAGAGGGAAGATAGGTTGGTGCTTAAGAACAAGTCTCCTAGGTGG CACGAACAGCTGCAGTGTTGGTGCCTGAATTTCCGTGGGCGGGTCACTGTTGCCTCGGTT AAAAACTTCCAGTTGGTGGCTTCTGAGGACAATGGACCAGAGAACCAAGAGAGTGACAAG GTGATTCTCCAATTCGGAAAGATCGGAAAAGACTTGTTCACCATGGACTACGGTTATCCA ATATCGGCATTTCAAGCTTTTGCAATTTGTCTGAGCAGTTTTGATACAAAAATTGCCTGC GAATGA

Peptide Sequence

PEP ID	Zm00001d029165_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:1:60879723:60888261:-1 gene:Zm00001d029165 transcript:Zm00001d029165_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TUB-transcription factor 11 description:Tubby protein
Sequence	MSFRSLIQDMKDEFGSISRHSLRSRSHRSAGNAARAAAAGPSEAMDQSCWSQLPPELLRE VLVRIEASESWWPARKNVVSGAGVCRTWRGIMKEAVRVPEVSGKLTFPISLKQPGPRDGT LKCFIRRNRTTQTYYLYIGLTEALADDGKFLLAARKCRKPTCTDYLISLDKVDMSKGSST YIGKLRSNFLGTKFTVYDAHPPYDGAAVSKSRSARVVGLKQVSPRVPAGNYPVSHISYEL NVLGSRGPRRMNCVMDSIPASAVKEGGKTPTQTEFPLSSLDSFPSFPFFRSKSARIDSST SQSSSQREDRLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLVASEDNGPENQESDK VILQFGKIGKDLFTMDYGYPISAFQAFAICLSSFDTKIACE

Transcript Sequence

Transcript ID	Zm00001d029165_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:60879723:60888261:-1 gene:Zm00001d029165 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TUB-transcription factor 11 description:Tubby protein
Sequence	ATTCCATTTCTCCATCCATGACAGCTCGCCATTTCCCCACCTGTTCCTACGCTACCGCCA CCTAAAAAAAATTCCAGAAACCAAGAATCTCTTCACCGGTTATTCGCAGGTCATTTCATT TCGGCCGGTGCCTATTTTAGGCCGATTGGAGGGAAGGCTGGTCTGTGTTTTATTTTCCTG CTGCGAGCGCTTTCTTGGGCGAGTTGAATTTGGGCGCCTCTTGCTCCAGGCAGTATTTTA TCGAGCTAGAGTCTGGTACCCGGTGATTCTTGCTTGGTCCAGGCGCCAAGGCGAGGAATT GGGCCTAGCTCCAGCTCAAATCTGTGCCTTGTTGCAGACAGAAGGATTTCTGCATGGGCG AGTTGAATTTGGGCGCCTCTTGCTCCAGGCAGTATTTTATCGAGCTAGAGTCTGGTACCC GGTGATTCTTGCTTGGTCCAGGCGCCAAGGCGAGGAATTGGGCCTAGCTCCAGCTCAAAT CTGTGCCTTGTTGCAGACAGAAGGATTTCTGCATGGGCGACCATAACTAAGATGTGAGAT TTGGTGGCGTCAGCTCGGCTGGTGGGTGATTCTCGGTGCGTACACAGACACATCCCTGGA GCCTGGAGGCTTGAGCTGATTTGGCGAGGAGGACAGTGCAGGAGAGAGATGTCTTTCAGG AGCCTGATTCAGGACATGAAGGACGAGTTCGGGAGCATCTCGCGGCATAGCCTGCGGTCC CGGTCTCACCGCTCCGCCGGGAACGCGGCGCGGGCGGCGGCCGCGGGACCGTCGGAGGCG ATGGATCAGAGCTGCTGGTCGCAGCTGCCCCCCGAGCTCCTGCGGGAGGTGCTGGTGAGG ATCGAGGCATCGGAGAGCTGGTGGCCAGCGCGCAAGAACGTGGTGTCAGGCGCCGGCGTC TGCCGGACCTGGAGGGGCATCATGAAGGAGGCCGTGCGCGTCCCGGAGGTGTCAGGGAAG CTCACGTTCCCCATCTCACTTAAGCAGCCTGGCCCAAGGGATGGCACTCTTAAATGTTTC ATCAGGAGAAATCGAACTACTCAGACATATTATCTGTATATTGGATTGACAGAAGCATTG GCTGATGATGGGAAGTTTCTACTTGCTGCACGCAAGTGTCGTAAGCCCACCTGCACAGAC TACCTAATTTCTCTTGATAAGGTCGATATGTCAAAGGGAAGCAGCACCTATATTGGCAAG CTAAGATCAAATTTCCTTGGAACAAAGTTCACTGTCTATGATGCTCATCCACCATATGAT GGTGCTGCGGTCTCAAAGAGTCGCTCTGCACGTGTGGTTGGTTTGAAGCAGGTCTCCCCT AGAGTTCCGGCTGGAAATTATCCCGTTTCACATATTTCTTACGAGCTAAATGTTCTGGGC TCCAGAGGTCCAAGAAGGATGAACTGTGTTATGGATTCCATCCCTGCATCAGCTGTTAAG GAAGGAGGGAAAACTCCTACACAGACTGAATTTCCACTTAGCAGCCTTGACTCTTTCCCA TCATTTCCATTCTTCAGATCTAAATCAGCTCGGATAGACAGTTCAACGTCGCAATCATCC AGTCAGAGGGAAGATAGGTTGGTGCTTAAGAACAAGTCTCCTAGGTGGCACGAACAGCTG CAGTGTTGGTGCCTGAATTTCCGTGGGCGGGTCACTGTTGCCTCGGTTAAAAACTTCCAG TTGGTGGCTTCTGAGGACAATGGACCAGAGAACCAAGAGAGTGACAAGGTGATTCTCCAA TTCGGAAAGATCGGAAAAGACTTGTTCACCATGGACTACGGTTATCCAATATCGGCATTT CAAGCTTTTGCAATTTGTCTGAGCAGTTTTGATACAAAAATTGCCTGCGAATGAGGCAAG GTGATTTTTCCCCTTCTCTATTCCCCTTGCTTGTATTATGGACATGCAGTAAAATTTTAT TGAACATGCAATTTCCAATGTCAAGGATGATTGGATGAAGCTCTCCAGTCTCCAC