Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029129_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:1:59406872:59421123:1 gene:Zm00001d029129 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metal tolerance protein C1
Sequence

ATGACGCCAGCAACCTCCGCCCGCCGCGCGCTCGCCCCACCCGCCGTGCCGGCGGAGCCC
CGCTGCGGGCCCCACTGGCTCGTGGCCGCCCGCGGCCACGTGGGCCACTCGCACCACCGC
GGCGGGGAGGACGAGGGCGAGACATCCGAGAGGATCTTTCGTCTGGGACTCGCCGCTGAC
GTCGTACTCACCGCGGGGAAGGCCGTCACAGGCTATCTCTCCGGCAGCACCGCCATCGCC
GCCGATGCCGCCCACTCCCTCTCGGACATAGTGCTTAGCGGGGTGGCTCTGCTGTCTTAC
AGGGCGGCCAAGGCTCCCAGAGACAAGGAACATCCCTATGGGCATGGAAAGTTTGAAAGT
TTAGGAGCTCTTGGAATTTCAAGTATGCTGTTGGTTACTTCAGGTGGGATTGCATGGCAT
GCTTTTGAAGTTCTTCAGGGAGTTATGTCTTCTGCTCCTGATATAATTGGCAATACATTG
CATGCACACCATGACCATGGTAGCAGTGGGCATCATCATGGAATAGATTTGGAACATCCA
GTTCTTGCATTGAGCATGACAACTTTAGCAATATCTATCAAAGAAGGGCTATACTGGATA
ACAAAAAGAGCTGGGGAAAAGGAAGGCAGTGGTCTGATGAAAGCTAATGCATGGCACCAT
CGTGCAGATGCTATTTCATCTGTCGTTGCCCTAGTAGGGGTAGGTGGTTCCATTCTTGGG
TTGCCTCTTCTTGATCCACTAGCTGGACTTGTTGTCTCTGGCATGATTCTGAAAGCTGGT
ATTAAGACTGGATATGAGAGTGTTCTGGAATTAGTTGATGCTGCTGTGGATCCTTCACTT
TTAGAACCAATCAAGGAAACTATTTTGAGGGTTCACGGTGTGAAGGGATGTCATCGATTG
AGGGGAAGAAAAGCTGGGACATCATTATATCTTGATGTGCATATAGAGGTATATCCTTTT
CTGAGTGTTAGTGCAGCACATGATATCGGTGAAACTGTTCGTCATCAAATTCAAAAGGAG
CACAATCAAGTTGCTGAAGTTTTCATACACATAGATCCCTCGTACTTAGTAGGCCCGACC
ATGGACCTAAAAAGGATCCTGAAGGACTCTGATGGAACAAATTCAGAAGCTATCCCACGG
CAACAAAGTGCAGAAGCCATCGTGTCTAATATTATTTCATCTCATTTTTCGGAGAAAATG
GCGCTCGAACATCTAATGCTGCATTACGTGCAAGGAAGAGTGTTGCTCCAGGTCCAAGTT
TCAATGTCTCCAGAAATTTTGATTCGGGATGCAATGGAAGTCGCGAAGCAAGCCGAAGAG
GAGATACTCAGGGCTGATGCCAGCATAAGCCAAATCAGCTTGCAGCTAAGATTGGGCCAA
CAAATCAAGCAACTTCAGCTAGCATCGCAAGAACGTCGCTGA

Peptide Sequence

PEP ID

Zm00001d029129_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:1:59406872:59421123:1 gene:Zm00001d029129 transcript:Zm00001d029129_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metal tolerance protein C1
Sequence

MTPATSARRALAPPAVPAEPRCGPHWLVAARGHVGHSHHRGGEDEGETSERIFRLGLAAD
VVLTAGKAVTGYLSGSTAIAADAAHSLSDIVLSGVALLSYRAAKAPRDKEHPYGHGKFES
LGALGISSMLLVTSGGIAWHAFEVLQGVMSSAPDIIGNTLHAHHDHGSSGHHHGIDLEHP
VLALSMTTLAISIKEGLYWITKRAGEKEGSGLMKANAWHHRADAISSVVALVGVGGSILG
LPLLDPLAGLVVSGMILKAGIKTGYESVLELVDAAVDPSLLEPIKETILRVHGVKGCHRL
RGRKAGTSLYLDVHIEVYPFLSVSAAHDIGETVRHQIQKEHNQVAEVFIHIDPSYLVGPT
MDLKRILKDSDGTNSEAIPRQQSAEAIVSNIISSHFSEKMALEHLMLHYVQGRVLLQVQV
SMSPEILIRDAMEVAKQAEEEILRADASISQISLQLRLGQQIKQLQLASQERR

Transcript Sequence

Transcript ID

Zm00001d029129_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:59406872:59421123:1 gene:Zm00001d029129 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metal tolerance protein C1
Sequence

GCTTCGTTCGTCTCGCCGCCCGCGCCGCGGTTTCTCGCCGGGGCATGACGCCAGCAACCT
CCGCCCGCCGCGCGCTCGCCCCACCCGCCGTGCCGGCGGAGCCCCGCTGCGGGCCCCACT
GGCTCGTGGCCGCCCGCGGCCACGTGGGCCACTCGCACCACCGCGGCGGGGAGGACGAGG
GCGAGACATCCGAGAGGATCTTTCGTCTGGGACTCGCCGCTGACGTCGTACTCACCGCGG
GGAAGGCCGTCACAGGCTATCTCTCCGGCAGCACCGCCATCGCCGCCGATGCCGCCCACT
CCCTCTCGGACATAGTGCTTAGCGGGGTGGCTCTGCTGTCTTACAGGGCGGCCAAGGCTC
CCAGAGACAAGGAACATCCCTATGGGCATGGAAAGTTTGAAAGTTTAGGAGCTCTTGGAA
TTTCAAGTATGCTGTTGGTTACTTCAGGTGGGATTGCATGGCATGCTTTTGAAGTTCTTC
AGGGAGTTATGTCTTCTGCTCCTGATATAATTGGCAATACATTGCATGCACACCATGACC
ATGGTAGCAGTGGGCATCATCATGGAATAGATTTGGAACATCCAGTTCTTGCATTGAGCA
TGACAACTTTAGCAATATCTATCAAAGAAGGGCTATACTGGATAACAAAAAGAGCTGGGG
AAAAGGAAGGCAGTGGTCTGATGAAAGCTAATGCATGGCACCATCGTGCAGATGCTATTT
CATCTGTCGTTGCCCTAGTAGGGGTAGGTGGTTCCATTCTTGGGTTGCCTCTTCTTGATC
CACTAGCTGGACTTGTTGTCTCTGGCATGATTCTGAAAGCTGGTATTAAGACTGGATATG
AGAGTGTTCTGGAATTAGTTGATGCTGCTGTGGATCCTTCACTTTTAGAACCAATCAAGG
AAACTATTTTGAGGGTTCACGGTGTGAAGGGATGTCATCGATTGAGGGGAAGAAAAGCTG
GGACATCATTATATCTTGATGTGCATATAGAGGTATATCCTTTTCTGAGTGTTAGTGCAG
CACATGATATCGGTGAAACTGTTCGTCATCAAATTCAAAAGGAGCACAATCAAGTTGCTG
AAGTTTTCATACACATAGATCCCTCGTACTTAGTAGGCCCGACCATGGACCTAAAAAGGA
TCCTGAAGGACTCTGATGGAACAAATTCAGAAGCTATCCCACGGCAACAAAGTGCAGAAG
CCATCGTGTCTAATATTATTTCATCTCATTTTTCGGAGAAAATGGCGCTCGAACATCTAA
TGCTGCATTACGTGCAAGGAAGAGTGTTGCTCCAGGTCCAAGTTTCAATGTCTCCAGAAA
TTTTGATTCGGGATGCAATGGAAGTCGCGAAGCAAGCCGAAGAGGAGATACTCAGGGCTG
ATGCCAGCATAAGCCAAATCAGCTTGCAGCTAAGATTGGGCCAACAAATCAAGCAACTTC
AGCTAGCATCGCAAGAACGTCGCTGATCTACATGCAGGAGATCACTGATCCATTTGCTGG
CTGCTTCATGAGTCTACTCGGGAGTATTTCCTTTTGCTAATTTTTCTGACATACATGAGC
TTGGTCTGCTGATGAGGCAGTAGGCTATAGGATTCTAGGAACCGACTGTGTACATTGTAA
TCAGAGTGTTCGGAGACGTGAAGCTGAGTTTGTAATAATACACAAGCAGCCTTGCTCAGA
AATGTACTGGGCAACAAATTGTCTGCCACATACTGTCAATGTAAAATGTATGAACAAGTT
CCTCACTGGCCCCGCTATAATAACAACGAACCATGGCTACTGATGCAAAATAAAATGAAT
ATTGTTTTTTTT