Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029105_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:58197901:58201581:1 gene:Zm00001d029105 gene_biotype:protein_coding transcript_biotype:protein_coding description:Blue-light photoreceptor PHR2
Sequence	ATGGCCACCGCCTCCGGCACTGACGCCGGTGCCCAGCCGCGCGACGACCCCAGCCTCCTC CCCTTCGCGTCCTTCTCGCTCGGCCTCTCCATCCGCGCGCCGGCCACCCCCACACTCGCC TCCGTCCCCTCCACCCTCCACCTCCCCACTCAAATCTCTACACTCGCCGTCTGCCTCCAC CCCTCCGCCGCGCAGCCCTCCTCCCGCCGCACCACCCGCCTCAATTCCGCCACCTCCTCC GTCATCGCCCCGCTGCCCTCCTCAACGCCCGGCCTCTCCCGCTCCTTCCCTTCGGGCGCG CCCGCCGCAGCAGGGCGCCGCCGCACGCTCGTCTGGTTCCGCGCCGACCTCCGCCTCCAC GACCATGAGCCGTTTCACGCCGCAGCGGGGGCGTCGTCCTCCCTCCTCCCCGTTTTCGTC TTCGATCCGCGGGACTTCGGCAAGTCCCCCTCGGGGTTCGACCGGACGGGCCCGTACCGC GCCAACTTCCTGCTCGATTCGGTCGCCGACCTGCGCCGGAGCCTCCGCGCCCGCGGTGGG GACCTGGTGGTGCGCGTGGGTAGGCCCGAAGTGGTCATTCCCGAGCTCGCGCGGGCGGCG GGCGCGGAGGCCGTGTACGCTCACGGGGAGGTATCGCGGGACGAGGTCCGCGCCGAGGAG AGGGTGCAAAAGGCTGTGGAGAAGGAGGGTATCAACGTGAAGTACTTCTGGGGTAGCACG CTATACCACGTGGAAGACCTTCCCTTCCGCCTCGAGGACATGCCGTCCAACTATGGCGGC TTCAGGGAGGCCGTGAAGGGGTTGGAGGTCAGAAAGGTGCTGGAGGCTCCCGAGGAGGTC AAGTGCGTGCCCATGAAGAATGTGCTCGAGCCCGGTGACATCCCCACGCTTGCTGAGCTC GGGCTCACTGCGCCACCAGCCATGTCACAGGACTCAAAACCTGCTGTTGGCTCTACTCTC ATTGGTGGTGAGACAGAAGCTCTGGAGAGGTTGAAGAAGTTTGCTGCAGAATGCTCTATG CAGCCAAACAAAGTAGACAAAAGCAATACCCAAGATAGCATATATGGTGCTAATTTCTCT TGCAAAATTTCTCCATGGCTTGCTACAGGTTGCCTCTCTCCACGGTTCATGTATGAGGAG TTGAAGAAGCATGCTACTAAAGCAATTCCTTTTGGGTCAACACCCAAGAATAATGATGGC ACATCTGATGCTGGAACAAATTGGTTAATGTTTGAGTTGCTGTGGAGAGATTTCTTCAGG TTCATCACAAAGAAGTACAGCTCTGTACAGAAGACATCTGAAGTTGCCACTGGCTGCACT CCCGCCCCAGCGCTTGCATGA

Peptide Sequence

PEP ID	Zm00001d029105_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:58197901:58201581:1 gene:Zm00001d029105 transcript:Zm00001d029105_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Blue-light photoreceptor PHR2
Sequence	MATASGTDAGAQPRDDPSLLPFASFSLGLSIRAPATPTLASVPSTLHLPTQISTLAVCLH PSAAQPSSRRTTRLNSATSSVIAPLPSSTPGLSRSFPSGAPAAAGRRRTLVWFRADLRLH DHEPFHAAAGASSSLLPVFVFDPRDFGKSPSGFDRTGPYRANFLLDSVADLRRSLRARGG DLVVRVGRPEVVIPELARAAGAEAVYAHGEVSRDEVRAEERVQKAVEKEGINVKYFWGST LYHVEDLPFRLEDMPSNYGGFREAVKGLEVRKVLEAPEEVKCVPMKNVLEPGDIPTLAEL GLTAPPAMSQDSKPAVGSTLIGGETEALERLKKFAAECSMQPNKVDKSNTQDSIYGANFS CKISPWLATGCLSPRFMYEELKKHATKAIPFGSTPKNNDGTSDAGTNWLMFELLWRDFFR FITKKYSSVQKTSEVATGCTPAPALA

Transcript Sequence

Transcript ID	Zm00001d029105_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:58197901:58201581:1 gene:Zm00001d029105 gene_biotype:protein_coding transcript_biotype:protein_coding description:Blue-light photoreceptor PHR2
Sequence	CCGCACCTCTCCTCCCCCGGCATCTCACTCCTCATCCGCAGTTCCACACCACCAAATCCC TACCTCCTCAGTCCTCACCCATTCATTCGTCCATCCCACCTACCATGGCCACCGCCTCCG GCACTGACGCCGGTGCCCAGCCGCGCGACGACCCCAGCCTCCTCCCCTTCGCGTCCTTCT CGCTCGGCCTCTCCATCCGCGCGCCGGCCACCCCCACACTCGCCTCCGTCCCCTCCACCC TCCACCTCCCCACTCAAATCTCTACACTCGCCGTCTGCCTCCACCCCTCCGCCGCGCAGC CCTCCTCCCGCCGCACCACCCGCCTCAATTCCGCCACCTCCTCCGTCATCGCCCCGCTGC CCTCCTCAACGCCCGGCCTCTCCCGCTCCTTCCCTTCGGGCGCGCCCGCCGCAGCAGGGC GCCGCCGCACGCTCGTCTGGTTCCGCGCCGACCTCCGCCTCCACGACCATGAGCCGTTTC ACGCCGCAGCGGGGGCGTCGTCCTCCCTCCTCCCCGTTTTCGTCTTCGATCCGCGGGACT TCGGCAAGTCCCCCTCGGGGTTCGACCGGACGGGCCCGTACCGCGCCAACTTCCTGCTCG ATTCGGTCGCCGACCTGCGCCGGAGCCTCCGCGCCCGCGGTGGGGACCTGGTGGTGCGCG TGGGTAGGCCCGAAGTGGTCATTCCCGAGCTCGCGCGGGCGGCGGGCGCGGAGGCCGTGT ACGCTCACGGGGAGGTATCGCGGGACGAGGTCCGCGCCGAGGAGAGGGTGCAAAAGGCTG TGGAGAAGGAGGGTATCAACGTGAAGTACTTCTGGGGTAGCACGCTATACCACGTGGAAG ACCTTCCCTTCCGCCTCGAGGACATGCCGTCCAACTATGGCGGCTTCAGGGAGGCCGTGA AGGGGTTGGAGGTCAGAAAGGTGCTGGAGGCTCCCGAGGAGGTCAAGTGCGTGCCCATGA AGAATGTGCTCGAGCCCGGTGACATCCCCACGCTTGCTGAGCTCGGGCTCACTGCGCCAC CAGCCATGTCACAGGACTCAAAACCTGCTGTTGGCTCTACTCTCATTGGTGGTGAGACAG AAGCTCTGGAGAGGTTGAAGAAGTTTGCTGCAGAATGCTCTATGCAGCCAAACAAAGTAG ACAAAAGCAATACCCAAGATAGCATATATGGTGCTAATTTCTCTTGCAAAATTTCTCCAT GGCTTGCTACAGGTTGCCTCTCTCCACGGTTCATGTATGAGGAGTTGAAGAAGCATGCTA CTAAAGCAATTCCTTTTGGGTCAACACCCAAGAATAATGATGGCACATCTGATGCTGGAA CAAATTGGTTAATGTTTGAGTTGCTGTGGAGAGATTTCTTCAGGTTCATCACAAAGAAGT ACAGCTCTGTACAGAAGACATCTGAAGTTGCCACTGGCTGCACTCCCGCCCCAGCGCTTG CATGAACTTACTTAGACAAGCTGATTGCCAGCTGCTTTTTTGGGGTGATAAACTTATGTG CATTTTCAATGGAGTCTTTTTTTTGCCGCCAATAATGTTGGTAGTCAAAGTGAACGCCGA ATGCGCATTCCTGCGTTTTGGTTTGGTCGATGTATTTAATGCTGTCGACATCCCTCCAAA TGACTGTTGAATGCAAATGATACTGTGAGCAACCTATCATCTGCTGTGTAAATGTGTTCT GTCGACGTTCCTCCAAATGACACTTCGATGCAATG