Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029091_T016
CDS Infomation	cds chromosome:B73_RefGen_v4:1:57486145:57493080:-1 gene:Zm00001d029091 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sucrose synthase2 description:sucrose synthase2
Sequence	ATGTCTGCGCCGAAGCTGGACCGCAACCCGAGCATCCGCGACCGCGTCGAGGACACCCTC CACGCGCACCGCAACGAGCTCGTCGCCCTCCTGTCCAAGTACGTGAACAAGGGGAAGGGC ATCCTGCAGCCGCACCACATCCTCGACGCGCTCGACGAGGTCCAGGGCTCCGGGGGCCGC GCGCTAGCCGAGGGACCCTTCCTCGACGTCCTCCGCTCCGCGCAGGAGGCGATCGTGCTG CCGCCGTTCGTGGCCATCGCGGTGCGCCCGCGCCCGGGAGTTTGGGAGTACGTCCGCGTC AACGTTCACGAGCTCAGCGTCGAGCAGCTCACAGTCTCGGAGTACCTCCGCTTCAAGGAG GAGCTTGTCGACGGCCAGCACAATGATCCCTACGTTCTCGAGCTTGACTTCGAGCCGTTC AATGTCTCAGTCCCACGCCCAAATCGGTCATCATCTATTGGAAACGGTGTGCAGTTCCTC AACCGACACTTGTCCTCAATCATGTTCCGCAACAGGGATTGCTTGGAGCCCCTGTTGGAT TTCCTCCGTGGCCACCGGCACAAGGGGCATGTTATGATGCTTAATGATAGAATACAAAGC TTGGGGAGGCTTCAGTCTGTGCTGACCAAAGCTGAGGAGCACTTGTCAAAGCTCCCTGCT GACACACCATACTCACAATTTGCTTATAAATTTCAAGAGTGGGGCCTGGAGAAAGGTTGG GGTGATACAGCAGGACATGTTTTGGAAATGATCCATCTCCTTCTAGACATCATTCAGGCG CCAGACCCATCTACCCTAGAGAAATTCTTGGGGAGGATCCCCATGATTTTTAACGTTGTT GTGGTATCCCCTCATGGATACTTTGGTCAAGCTAATGTATTAGGCTTGCCAGACACAGGA GGACAGATCGTCTATATACTGGACCAAGTCCGTGCACTAGAAAATGAGATGGTTCTCCGT TTAAAGAAACAAGGGCTTGATGTTTCCCCAAAGATTCTCATTGTTACTCGGCTGATACCA GATGCAAAAGGAACATCATGCAATCAGCGGCTTGAGAGAATTAGTGGAACACAACATACT TACATATTACGAGTTCCCTTCAGAAATGAAAATGGGATACTTAAGAAATGGATATCAAGA TTTGATGTGTGGCCATATCTGGAAACATTTGCTGAGGATGCTGCTGGTGAAATTGCTGCT GAATTACAAGGTACTCCAGACTTCATAATTGGAAACTACAGTGATGGAAATCTTGTGGCG TCATTGCTATCTTACAAGATGGGAATTACCCAGTGCAACATTGCTCATGCTCTAGAAAAG ACTAAGTATCCAGATTCAGACATATTTTGGAAGAATTTCGATGAGAAGTACCATTTCTCC TGCCAGTTCACTGCTGATATAATTGCTATGAACAATGCTGATTTTATCATCACCAGCACA TACCAAGAAATTGCTGGAAGCAAAAATACTGTTGGACAGTATGAGAGTCATACTGCCTTT ACTCTGCCTGGTCTGTACCGAGTTGTCCATGGGATCGATGTCTTCGATCCAAAGTTCAAT ATAGTCTCTCCTGGAGCTGACATGTCCATATACTTTCCACATACCGAGAAGGCCAAGCGA CTCACCTCTCTTCATGGTTCAATCGAAAATTTGATTTATGACCCGGAGCAAAACGATGAA CACATTGGGCATCTGGATGACCGGTCAAAGCCCATCCTCTTCTCCATGGCAAGACTCGAC AGGGTGAAGAACATAACAGGGCTGGTCGAAGCTTTTGCTAAGTGCGCTAAGCTGAGGGAG CTGGTAAACCTTGTCGTCGTTGCCGGGTACAATGATGTCAACAAGTCCAAGGACAGGGAA GAGATCGCGGAGATAGAGAAGATGCATGAACTCATCAAGACCCACAACTTGTTCGGGCAG TTCCGCTGGATCTCTGCCCAGACAAACAGGGCCCGTAACGGCGAGCTCTATCGCTACATC GCTGATACCCATGGTGCTTTCGTACAGCCGGCCTTCTATGAAGCGTTCGGTCTCACCGTC GTTGAGGCCATGACCTGTGGGCTTCCTACTTTCGCGACGCTCCATGGAGGTCCAGCTGAG ATCATAGAGCATGGCGTCTCGGGCTTCCACATTGACCCGTACCACCCCGAACAGGCTGCT AATCTGATGGCCGACTTCTTCGACCGGTGCAAGCAAGACCCAGATCACTGGGTGAAAATA TCTGGAGCAGGGCTGCAGCGCATATACGAGAAGTACACATGGAAGATATACTCAGAGAGG TTGATGACACTGGCCGGGGTCTACGGTTTCTGGAAGTACGTGTCGAAGCTCGAGAGGCGG GAGACGAGGCGCTACCTTGAGATGTTCTACATACTGAAGTTCCGCGAGCTGGTGTGCTCT GTTCTCAACTCTCTTAGCATTACAGTACATGGAAATGAAATTTAG

Peptide Sequence

PEP ID	Zm00001d029091_P016
PEP Infomation	pep chromosome:B73_RefGen_v4:1:57486145:57493080:-1 gene:Zm00001d029091 transcript:Zm00001d029091_T016 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sucrose synthase2 description:sucrose synthase2
Sequence	MSAPKLDRNPSIRDRVEDTLHAHRNELVALLSKYVNKGKGILQPHHILDALDEVQGSGGR ALAEGPFLDVLRSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVHELSVEQLTVSEYLRFKE ELVDGQHNDPYVLELDFEPFNVSVPRPNRSSSIGNGVQFLNRHLSSIMFRNRDCLEPLLD FLRGHRHKGHVMMLNDRIQSLGRLQSVLTKAEEHLSKLPADTPYSQFAYKFQEWGLEKGW GDTAGHVLEMIHLLLDIIQAPDPSTLEKFLGRIPMIFNVVVVSPHGYFGQANVLGLPDTG GQIVYILDQVRALENEMVLRLKKQGLDVSPKILIVTRLIPDAKGTSCNQRLERISGTQHT YILRVPFRNENGILKKWISRFDVWPYLETFAEDAAGEIAAELQGTPDFIIGNYSDGNLVA SLLSYKMGITQCNIAHALEKTKYPDSDIFWKNFDEKYHFSCQFTADIIAMNNADFIITST YQEIAGSKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKR LTSLHGSIENLIYDPEQNDEHIGHLDDRSKPILFSMARLDRVKNITGLVEAFAKCAKLRE LVNLVVVAGYNDVNKSKDREEIAEIEKMHELIKTHNLFGQFRWISAQTNRARNGELYRYI ADTHGAFVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGVSGFHIDPYHPEQAA NLMADFFDRCKQDPDHWVKISGAGLQRIYEKYTWKIYSERLMTLAGVYGFWKYVSKLERR ETRRYLEMFYILKFRELVCSVLNSLSITVHGNEI

Transcript Sequence

Transcript ID	Zm00001d029091_T016
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:57486145:57493080:-1 gene:Zm00001d029091 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sucrose synthase2 description:sucrose synthase2
Sequence	ATCTCTCGCCACTTCGCAATTCGCCAGTCGCCACCGGCACCACCACACCCACCCTCGCGG CCGCGAACAAACGACCCACTGACCACTGGCGGGCTGCACGGCAGCCATGTCTGCGCCGAA GCTGGACCGCAACCCGAGCATCCGCGACCGCGTCGAGGACACCCTCCACGCGCACCGCAA CGAGCTCGTCGCCCTCCTGTCCAAGTACGTGAACAAGGGGAAGGGCATCCTGCAGCCGCA CCACATCCTCGACGCGCTCGACGAGGTCCAGGGCTCCGGGGGCCGCGCGCTAGCCGAGGG ACCCTTCCTCGACGTCCTCCGCTCCGCGCAGGAGGCGATCGTGCTGCCGCCGTTCGTGGC CATCGCGGTGCGCCCGCGCCCGGGAGTTTGGGAGTACGTCCGCGTCAACGTTCACGAGCT CAGCGTCGAGCAGCTCACAGTCTCGGAGTACCTCCGCTTCAAGGAGGAGCTTGTCGACGG CCAGCACAATGATCCCTACGTTCTCGAGCTTGACTTCGAGCCGTTCAATGTCTCAGTCCC ACGCCCAAATCGGTCATCATCTATTGGAAACGGTGTGCAGTTCCTCAACCGACACTTGTC CTCAATCATGTTCCGCAACAGGGATTGCTTGGAGCCCCTGTTGGATTTCCTCCGTGGCCA CCGGCACAAGGGGCATGTTATGATGCTTAATGATAGAATACAAAGCTTGGGGAGGCTTCA GTCTGTGCTGACCAAAGCTGAGGAGCACTTGTCAAAGCTCCCTGCTGACACACCATACTC ACAATTTGCTTATAAATTTCAAGAGTGGGGCCTGGAGAAAGGTTGGGGTGATACAGCAGG ACATGTTTTGGAAATGATCCATCTCCTTCTAGACATCATTCAGGCGCCAGACCCATCTAC CCTAGAGAAATTCTTGGGGAGGATCCCCATGATTTTTAACGTTGTTGTGGTATCCCCTCA TGGATACTTTGGTCAAGCTAATGTATTAGGCTTGCCAGACACAGGAGGACAGATCGTCTA TATACTGGACCAAGTCCGTGCACTAGAAAATGAGATGGTTCTCCGTTTAAAGAAACAAGG GCTTGATGTTTCCCCAAAGATTCTCATTGTTACTCGGCTGATACCAGATGCAAAAGGAAC ATCATGCAATCAGCGGCTTGAGAGAATTAGTGGAACACAACATACTTACATATTACGAGT TCCCTTCAGAAATGAAAATGGGATACTTAAGAAATGGATATCAAGATTTGATGTGTGGCC ATATCTGGAAACATTTGCTGAGGATGCTGCTGGTGAAATTGCTGCTGAATTACAAGGTAC TCCAGACTTCATAATTGGAAACTACAGTGATGGAAATCTTGTGGCGTCATTGCTATCTTA CAAGATGGGAATTACCCAGTGCAACATTGCTCATGCTCTAGAAAAGACTAAGTATCCAGA TTCAGACATATTTTGGAAGAATTTCGATGAGAAGTACCATTTCTCCTGCCAGTTCACTGC TGATATAATTGCTATGAACAATGCTGATTTTATCATCACCAGCACATACCAAGAAATTGC TGGAAGCAAAAATACTGTTGGACAGTATGAGAGTCATACTGCCTTTACTCTGCCTGGTCT GTACCGAGTTGTCCATGGGATCGATGTCTTCGATCCAAAGTTCAATATAGTCTCTCCTGG AGCTGACATGTCCATATACTTTCCACATACCGAGAAGGCCAAGCGACTCACCTCTCTTCA TGGTTCAATCGAAAATTTGATTTATGACCCGGAGCAAAACGATGAACACATTGGGCATCT GGATGACCGGTCAAAGCCCATCCTCTTCTCCATGGCAAGACTCGACAGGGTGAAGAACAT AACAGGGCTGGTCGAAGCTTTTGCTAAGTGCGCTAAGCTGAGGGAGCTGGTAAACCTTGT CGTCGTTGCCGGGTACAATGATGTCAACAAGTCCAAGGACAGGGAAGAGATCGCGGAGAT AGAGAAGATGCATGAACTCATCAAGACCCACAACTTGTTCGGGCAGTTCCGCTGGATCTC TGCCCAGACAAACAGGGCCCGTAACGGCGAGCTCTATCGCTACATCGCTGATACCCATGG TGCTTTCGTACAGCCGGCCTTCTATGAAGCGTTCGGTCTCACCGTCGTTGAGGCCATGAC CTGTGGGCTTCCTACTTTCGCGACGCTCCATGGAGGTCCAGCTGAGATCATAGAGCATGG CGTCTCGGGCTTCCACATTGACCCGTACCACCCCGAACAGGCTGCTAATCTGATGGCCGA CTTCTTCGACCGGTGCAAGCAAGACCCAGATCACTGGGTGAAAATATCTGGAGCAGGGCT GCAGCGCATATACGAGAAGTACACATGGAAGATATACTCAGAGAGGTTGATGACACTGGC CGGGGTCTACGGTTTCTGGAAGTACGTGTCGAAGCTCGAGAGGCGGGAGACGAGGCGCTA CCTTGAGATGTTCTACATACTGAAGTTCCGCGAGCTGGTGTGCTCTGTTCTCAACTCTCT TAGCATTACAGTACATGGAAATGAAATTTAGTCTCTTATTGACTGGCTGGCTTCTGCTTC CCGTGCATGCAGGCGAAGACCGTGCCGCTTGCAATTGACCAACCGCAGTAGCTTGCGCAA CTGCGACTGCGTAGCACTTGGTACAAGACTGAAACCTGAAGGACCTTCAGTAATTTAGGC GCGGCAGACGGTAGCCAATAAAATGTGCCGGAGCTGAACTGGTTTTTTATTATGTACATA ATGGCAGTATAACAAAATT