Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029084_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:57446546:57452595:1 gene:Zm00001d029084 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fumarate hydratase 1 mitochondrial
Sequence

ATGGCGATGGCTCTGCGCCGCCTTGCGGGCGTGTCCGGATCGCCGTCGGCCTCCTCTGCC
GCGGCCACGGTGCTACTCCGGTCGGCGCTGACCCGCCCGATCTCCACCGGCTTCCGCGAG
GAGCGCGACACCTTCGGTCCCATCCAAGTCCCCAACGACAAGCTGTGGGGCGCGCAGACG
CAGAGATCGCTGCAGAACTTTGACATTGGCGGGGAGCGTGAGAGGATGCCCGTTCCCATC
ATCCGTGCCTTTGGCGTGCTAAAAAAGTGCGCCGCTAAGGTGAATATGGACTATGGCCTT
GATCCAACAATAGGGAAGGCCATAATACAGGCAGCTGAGGAGGTCGCAGAGGGAAAGTTG
GATGATCACTTCCCACTTGTTATCTGGCAAACTGGCAGTGGCACACAAAGCAACATGAAT
GCCAATGAGGTAATTGCAAATAGGGCATCTGAGATCCTTGGACACAAGCGCGGTGAGAAG
TTTGTGCACCCAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT
GTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGTTTGCAACAG
TTGCATGATTCACTTCATTCGAAAACTATTGAGTTTAAAGACATAATTAAAATTGGACGT
ACACATACCCAAGATGCCACCCCATTGACTCTTGGCCAAGAATTCAGTGGCTACACTACA
CAGGTCAAATATGGAATTGACCGCATTAATTGTACATTACCTCGGATGTACCAGCTTGCT
CAAGGTGGAACTGCAGTTGGAACTGGCTTGAACACCAAGAAAGGATTTGATGCCAAAATA
GCTGCTGCAGTGGCTGAGGAAACAAACCTACCCTTTGTGACAGCAGAGAACAAGTTTGAA
GCTTTGGTTAGTAACAGTGCACATATATAA

Peptide Sequence

PEP ID

Zm00001d029084_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:57446546:57452595:1 gene:Zm00001d029084 transcript:Zm00001d029084_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fumarate hydratase 1 mitochondrial
Sequence

MAMALRRLAGVSGSPSASSAAATVLLRSALTRPISTGFREERDTFGPIQVPNDKLWGAQT
QRSLQNFDIGGERERMPVPIIRAFGVLKKCAAKVNMDYGLDPTIGKAIIQAAEEVAEGKL
DDHFPLVIWQTGSGTQSNMNANEVIANRASEILGHKRGEKFVHPNDHVNRSQSSNDTFPT
VMHIATAVEIHSRFIPSLQQLHDSLHSKTIEFKDIIKIGRTHTQDATPLTLGQEFSGYTT
QVKYGIDRINCTLPRMYQLAQGGTAVGTGLNTKKGFDAKIAAAVAEETNLPFVTAENKFE
ALVSNSAHI

Transcript Sequence

Transcript ID

Zm00001d029084_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:57446546:57452595:1 gene:Zm00001d029084 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fumarate hydratase 1 mitochondrial
Sequence

ATACTAACTCTCCTCTCTCCCAGAGTCCCGGTCAGCTCGACTGCTCCAGTTCTTCCCATT
TCCCAGCCGCCGCGGCGCCACGCAGACCTAGCAGAGAAACACCCACCCGAGATGGCGATG
GCTCTGCGCCGCCTTGCGGGCGTGTCCGGATCGCCGTCGGCCTCCTCTGCCGCGGCCACG
GTGCTACTCCGGTCGGCGCTGACCCGCCCGATCTCCACCGGCTTCCGCGAGGAGCGCGAC
ACCTTCGGTCCCATCCAAGTCCCCAACGACAAGCTGTGGGGCGCGCAGACGCAGAGATCG
CTGCAGAACTTTGACATTGGCGGGGAGCGTGAGAGGATGCCCGTTCCCATCATCCGTGCC
TTTGGCGTGCTAAAAAAGTGCGCCGCTAAGGTGAATATGGACTATGGCCTTGATCCAACA
ATAGGGAAGGCCATAATACAGGCAGCTGAGGAGGTCGCAGAGGGAAAGTTGGATGATCAC
TTCCCACTTGTTATCTGGCAAACTGGCAGTGGCACACAAAGCAACATGAATGCCAATGAG
GTAATTGCAAATAGGGCATCTGAGATCCTTGGACACAAGCGCGGTGAGAAGTTTGTGCAC
CCAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTGTAATGCAT
ATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGTTTGCAACAGTTGCATGAT
TCACTTCATTCGAAAACTATTGAGTTTAAAGACATAATTAAAATTGGACGTACACATACC
CAAGATGCCACCCCATTGACTCTTGGCCAAGAATTCAGTGGCTACACTACACAGGTCAAA
TATGGAATTGACCGCATTAATTGTACATTACCTCGGATGTACCAGCTTGCTCAAGGTGGA
ACTGCAGTTGGAACTGGCTTGAACACCAAGAAAGGATTTGATGCCAAAATAGCTGCTGCA
GTGGCTGAGGAAACAAACCTACCCTTTGTGACAGCAGAGAACAAGTTTGAAGCTTTGGTT
AGTAACAGTGCACATATATAAATCTTACTCTAATTTGTTACTGCATATAGACAAGGAATT
TGTTACTGTTTAGCAGTTGGAAGGGCATTTTTGAATATGTTGCCTCACAAAATGAAAATA
ACAAATAGTTACGAACTGAAATCAACTGACACAAATATCATCTGTTCCCAAGTTGAGTGG
ACGAAATATTAACATGTGTATGTCATTTTCATTTATTTTATTTAATTCTAGTTGTTAGGC
TTTGTTCTTTGTAGAAGCAAAATCCAACCACTTATTTGTATAGTGTATTTAATATGGCTT
TCGGTTTTATTGTCTGGCTACTTTTCCTTCTAATTTTATATTATTCAGACTATATTCTAT
TGTTTCATCACTATATGTTTTCATCAGTTTTTTCCTTATAAGTAGGCAGCACATGACGCT
TTTGTTGAGAGCAGTGGTGCCGTAAATACAATTTCTGCATCTCTTATGAAGATAGCAAAC
GACATACGTTTGCTAGGAAGTGGTCCTCGGTGTGGTCTTGGTGAACTAATCCTACCAGAA
AATGAGCCTGGGAGCAGCATTATGCCTGGGAAAGTTAATCCAACCCAGTGTGAGGCTCTG
ACAATGGTTTGTGCACAGGTTATGGGTAATCATGTTGGTGTTACAATTGGTGGTGCCAAT
GGGCATTTTGAACTGAATGTTTTTAAGCCAATGATCGCAGCCGGATTACTTCGATCATTG
AGGTTGTTAGGGGATGCATCCGTGTCCTTTGAGAAAAATTGTGTCAGGGGAATTCAAGCA
AACCACAAGAGAATTTCACAACTTTTGCATGAGTCTCTGATGTTAGTGACATCTTTGAAC
CCTAAAATTGGCTATGACAATGCTGCAGCTGTTGCTAAGAAAGCCCACAAAGAAGGAACC
ACGTTGAAGGAAGCTGCATTAGACCTTGGAGTATTAACGGAGCAAGAATTCCATGAGCTT
GTCGTCCCGGAGAAAATGATTGGTCCTTCTGATTGATAACCCCATGTTCACTATGTTTCT
TTGAAGCATTCAGGTTGCCACATCCGCGAGTTCTGGTGGCCCTGTGTTTCCAAGTTAATG
ATTCTAGCGCACCCATAAATAAAGCAAATAATTTTTCATATGGTCATTAGGTCCTCACCG
TACCGCACTAGAGAAATGATTTTTGCATGGCGGATGGTATCTGAGAAAACAGTTGTATTC
TTGTTCAAATAGGGAGCAGTGCACTTTGATTCATGAGGCGCCTTCCATTATCTTGGCATC
AGTCAACCTTTTCTTGCCAAGTAGCTAGTGCTATGTAACAAGTGACATGGCAACCATGTA
TAGAAATTATTTGCATGGGTTTGTGTTCTTGCCAGGTAGCTAATGTTATGTAATAAGTGA
CAAGGAAACAATGTCATGAATTATTTGCATTGGGTTTTGACGAGTGAAATAGAAATATAC
GCCCTGTTTTAGTTTTCTTTTTAGGGC