Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029077_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:1:57261612:57266206:1 gene:Zm00001d029077 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative tRNA pseudouridine synthase
Sequence	ATGGCCGCCGCCACCGCCGCCGCCGCCACGGCGTCGGCTTCGTGTCTTCTCCGGAGGTCT ATATCCTCTGCATTCCTCGCGAAGCGCGCGGTCCCTAGCATTCCGCGTACAACTCTCTGC TATTCCTCCTCCGCATCCGCCAGACTCAAACCAACGCCGTCCCTGTCTCCGCCTGTCACG TCCGCCAACGATGGAGGCGGCGGGATGAGGTGGGAGTCAGCGCGCAAGAAGAGGGTGGTG CTCCGCATCGGCTACGTCGGCACTGATTACCGAGGGCTTCAAAAGCAGCAAGAGCTTGGC GTGGATTCGACCATTGAGTCAGTCCTGGAATCTGCCATCTTCAAGTCCGGGGGTATTCTC GAGAGTAATTATGGAAAACTGCAAAAGATTGGGTGGGAGAGGAGTAGCCGAACTGATAAA GGGGTACACTCATTGGCTACAATGATTTCCCTTAAGATGGAAATCCCTGATAGAGCATGG GAGGATGATCCTGATGGTATTGCTCTTGCCAGCTTCATTAACTCAAATTTGCCGGACAAT GTGAGGGTTTTTAGTATATTGCCTGCACAAAGGAGTTTTGATGTAAGGAGGGAGTGCTTA TATCGTGAGTACTTCTATCTTCTTCCTGCTGAAATTATTGGAATTAAAGATGACTATAGC TCTGAAGAAATGCAAGAGCACTTGTCAGAATTCAACAAAATACTGAAAGGTTTTGAGGGA AACCATCCATTCCATAATTACACTGCACGTGCCAAGTATAGGAAGGTTCTCGCGGGAAGA CACAGAAGGGCCAAAGGAGCAAGCTCGGCGTTGAAGTCCATGTCCTCTGACACTGGCATG GCAGAAAGCTCTTCTGAAGAAAGCACTTCTCCAGATCACGATGAGGACTTGAATATTTCA TCAATCTTTGACTCTGGTATACCAGAAGACACTCGTGTGAATGGTATTCTGAAGCTTTCT GAGGATCGGCTGCAGATTCAAGCTAGGTGGCTGCATGAGCCTGACGAAAGCGATAGATTA AACGCTTCACATTTCAGAGATATCATTACCTGTTCCTGTGGAGACTTGCAAACTTCATCA GGGATTCAGTTCGTTGAGTTGACCATATGCGGGGTATCTTTCATGCTACATCAGATCCGG AAAATGGTTGGAACCGCCGTGACGGTGAAGCGTGGACTACTACCAAGAGACATCATAGAG CTGTCCCTCGCGAAGTTCTCCAGAATCGTTCTACCAATAGCCCCTTCAGAGGTCCTGGTC CTCAAGGACAACAGTTTCTGCACGAAGAGCAAGGGAGGGAGGATCGTTCGCCCCGGGATC CAGTCCATGAACAAGTCGGAAGCAACCAGGAAGGGGGTCGAGGAGTTCTACAGGGCAGCG CTCCTGCCAGAAGTAGCGAAGTTCCTGGACCCCTCTCTGCCGCCGTGGAAGGAGTGGCTG GAGAACCTGGACAGGTTCTCGGGCATACCGGGTTCGCAGCTGGACGAAGTCAGGGAGGCG TATCGAGCGTGGAGGGATGATTACGACCGAGCGAAGATGGCTAGAAACTAG

Peptide Sequence

PEP ID	Zm00001d029077_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:1:57261612:57266206:1 gene:Zm00001d029077 transcript:Zm00001d029077_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative tRNA pseudouridine synthase
Sequence	MAAATAAAATASASCLLRRSISSAFLAKRAVPSIPRTTLCYSSSASARLKPTPSLSPPVT SANDGGGGMRWESARKKRVVLRIGYVGTDYRGLQKQQELGVDSTIESVLESAIFKSGGIL ESNYGKLQKIGWERSSRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALASFINSNLPDN VRVFSILPAQRSFDVRRECLYREYFYLLPAEIIGIKDDYSSEEMQEHLSEFNKILKGFEG NHPFHNYTARAKYRKVLAGRHRRAKGASSALKSMSSDTGMAESSSEESTSPDHDEDLNIS SIFDSGIPEDTRVNGILKLSEDRLQIQARWLHEPDESDRLNASHFRDIITCSCGDLQTSS GIQFVELTICGVSFMLHQIRKMVGTAVTVKRGLLPRDIIELSLAKFSRIVLPIAPSEVLV LKDNSFCTKSKGGRIVRPGIQSMNKSEATRKGVEEFYRAALLPEVAKFLDPSLPPWKEWL ENLDRFSGIPGSQLDEVREAYRAWRDDYDRAKMARN

Transcript Sequence

Transcript ID	Zm00001d029077_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:57261612:57266206:1 gene:Zm00001d029077 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative tRNA pseudouridine synthase
Sequence	GGACCTTCTACGTGGGCCACTCTTCCTCACATCGCCTCCCTCGACGATGGCCGCCGCCAC CGCCGCCGCCGCCACGGCGTCGGCTTCGTGTCTTCTCCGGAGGTCTATATCCTCTGCATT CCTCGCGAAGCGCGCGGTCCCTAGCATTCCGCGTACAACTCTCTGCTATTCCTCCTCCGC ATCCGCCAGACTCAAACCAACGCCGTCCCTGTCTCCGCCTGTCACGTCCGCCAACGATGG AGGCGGCGGGATGAGGTGGGAGTCAGCGCGCAAGAAGAGGGTGGTGCTCCGCATCGGCTA CGTCGGCACTGATTACCGAGGGCTTCAAAAGCAGCAAGAGCTTGGCGTGGATTCGACCAT TGAGTCAGTCCTGGAATCTGCCATCTTCAAGTCCGGGGGTATTCTCGAGAGTAATTATGG AAAACTGCAAAAGATTGGGTGGGAGAGGAGTAGCCGAACTGATAAAGGGGTACACTCATT GGCTACAATGATTTCCCTTAAGATGGAAATCCCTGATAGAGCATGGGAGGATGATCCTGA TGGTATTGCTCTTGCCAGCTTCATTAACTCAAATTTGCCGGACAATGTGAGGGTTTTTAG TATATTGCCTGCACAAAGGAGTTTTGATGTAAGGAGGGAGTGCTTATATCGTGAGTACTT CTATCTTCTTCCTGCTGAAATTATTGGAATTAAAGATGACTATAGCTCTGAAGAAATGCA AGAGCACTTGTCAGAATTCAACAAAATACTGAAAGGTTTTGAGGGAAACCATCCATTCCA TAATTACACTGCACGTGCCAAGTATAGGAAGGTTCTCGCGGGAAGACACAGAAGGGCCAA AGGAGCAAGCTCGGCGTTGAAGTCCATGTCCTCTGACACTGGCATGGCAGAAAGCTCTTC TGAAGAAAGCACTTCTCCAGATCACGATGAGGACTTGAATATTTCATCAATCTTTGACTC TGGTATACCAGAAGACACTCGTGTGAATGGTATTCTGAAGCTTTCTGAGGATCGGCTGCA GATTCAAGCTAGGTGGCTGCATGAGCCTGACGAAAGCGATAGATTAAACGCTTCACATTT CAGAGATATCATTACCTGTTCCTGTGGAGACTTGCAAACTTCATCAGGGATTCAGTTCGT TGAGTTGACCATATGCGGGGTATCTTTCATGCTACATCAGATCCGGAAAATGGTTGGAAC CGCCGTGACGGTGAAGCGTGGACTACTACCAAGAGACATCATAGAGCTGTCCCTCGCGAA GTTCTCCAGAATCGTTCTACCAATAGCCCCTTCAGAGGTCCTGGTCCTCAAGGACAACAG TTTCTGCACGAAGAGCAAGGGAGGGAGGATCGTTCGCCCCGGGATCCAGTCCATGAACAA GTCGGAAGCAACCAGGAAGGGGGTCGAGGAGTTCTACAGGGCAGCGCTCCTGCCAGAAGT AGCGAAGTTCCTGGACCCCTCTCTGCCGCCGTGGAAGGAGTGGCTGGAGAACCTGGACAG GTTCTCGGGCATACCGGGTTCGCAGCTGGACGAAGTCAGGGAGGCGTATCGAGCGTGGAG GGATGATTACGACCGAGCGAAGATGGCTAGAAACTAGGAGTGCTGGCAGTGTCGCAAGGT GGATGAACTACCTAGCAGTGAACAATGATGATTTATATATACTAGTTCGCTTGATGTTTA TATATTGAGATTCATAC