Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029055_T029
CDS Infomation	cds chromosome:B73_RefGen_v4:1:56385633:56404970:-1 gene:Zm00001d029055 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-directed RNA polymerase I subunit 1
Sequence	ATGGCTGACGGGCAGCATATTCAGGCAGCATCAGAGGAAGTGGATTCAATCCACTTCAGC TTCTATAGTGATGATGAAATTAAGAGGATCAGCATTAAAAAGATCACCAAGTCGGAGCGC CTTGATGCCAAAAACCTTCCTGTGCCAGGTGGATTACTGGACCCTGCAATGGGACCTATC AATGATATTGATATCTGCAAGAGTTGTGGTCAGCATTCTGTTCGTTGCCCTGGTCACTTC GGTCATATTGAGTTGGCAAAACCATTGTTCAATCCTTTGCTGTTTATGAGTCTGAAAAAC CTTCTCCATGTCACGTGTTTCCATTGTCACAAGTTCCGCCTGAACAAGGAACAGGTTGAC AGATATGTGAATGAACTTGAACTTTTAGTAAAGGGTGATATTGTCTGTGCTAAAAATTTG GAAGACTCAGTAGAAGAAGCATATCTTTCCAAGGAAGATGAAAACATGAACAAGACCACT TCAGGTGATAACTCATCTTCTGTGAAAGACAAGAAAACCTGGACATCTATCCAATTGAAA GAGGTTTTGTCTATTTTTTCCAAGATAATGAAAAAGAGACAGAAGAAGTGTGCAAAATGT GACATGAAGAGCCCAACAATCTCAAGTCCTATATTTGGTTGGCTGGTCAAGGACACAAAG GCTTCTGCTGTAAGAACAAATGCAATTGCTGATTTTAAACTCAAGGGAGATGGTGATATT CACAACTCAGGGGAAACAGGGGTTTCTGGTCTTGAGGAAGAGTCATCTTCACCTGGAATG GTGTCTAAAGACTCAATCAATGAAGTTAGAGGTCTTTCTGATGATACAATTAAAGAATTG GTAGCATCATCAGGAAAAAAACATCTATTGCCTACAGAGGTTGAATCTATTCTCAAGGAC TTGTGGAAAAATGAAGCTAGGTTCTGCATGTTACTTTGTGATTTCCAGAAGAATATGTCA AGTGAACCAGAAAAGAGAAGGGGCTATGAAATGTTCTTCTTGAGTAGTCTCCTTGTGGCA CCAAATAGATTCCGCCCATCAACTAGCTCTAGTCTTGGAATTATGGAACATCCTCAAAGT GTTCTGCTAAGTAAAGTGCAAGAATCCAATCTTGCGCTACAACATAACAATGCATCTTCT AACCATATGGATGTTCTTCAAAGATGGATGGATCTACAACGGAGTGTAAATGTGCTATAT GATAGTAGCAAAGGCCTTGCAAGAAGCGAGAAGAATGCTCATGGTATACGCCAGCTATTG GAAAAGAAAGAAGGAATTCTTCGACAAAAGATGATGGGGAAGAGGGTTAATTATGCATGC CGATCTGTTATATCTCCAGATCCGTACTTGGCTGTTAATGAAATTGGCATTCCTCCTGTT TTTGCGACACGATTGACATATCCTGAGAAAGTAACACCCTGGAATACCAAAAGGCTCCAA GAAGCTATAAGGAATGGTGCCGATATACATCCAGGTGCAACACATTACAGGGACAACAAT AGCATGTATAAGTTACAGGCAGTCCCTGCCAAACGCCGTTCCATTGCTAAGATGCTACCT GCATCTAGAGGATCAATTTGTCAGCCAGGGAGAGATCCTAATTGTGAGTTTGAAAGCAAG GTTGTATATCGGCATCTTCAAGATGGTGACATTGTACTTGTCAATAGGCAGCCTACTCTT CACAAGCCCAGCATGATGGCTCATTTTGTTCGGGTGTTACCTGGAGAAAAGACGTTACGA ATGCACTACGCCAATTGCAGCACCTACAATGCTGATTTTGACGGAGATGAGATGAATGTT CATGTTCCGCAAGATGAAATATCTCGTGCTGAGGCCATGAATATTGTTGACGCAAACAAG CAATACATTGGTCCTAGGAGTGGGGATGCTGTCAGAGGTCTCATACAGGACCACATTGTT GGTGCTGTACTATTGACAAAACCAGACACATTGCTAAGCCGTGAAGAATATAGTCAGCTT GTCTTTGGGTCTTGTGTGCCGTCCTCAAATTGTGGCTCTCATCACCCTGCTAAGGTGTCT GCTATTGAGGATTACGATACACTTGAACTTGTCCATCCTGCTATTTGGAAGCCAAGGCCC TTATGGACAGGAAAACAGGTTATAACAACCATCTTGAATCATTTAACAAAAGGTTGTCCT CCATTTACTGTGGAGCAGAAGGGAAAAATACCAAAAGAATATCTGAAAGAAGATCCTTCC GCTCAAAAGGAAAAAGAAGATCCTTCCGCTCGAAAAGAAGCTCATTCTGCTAAAAAAGGA AAACGAGAAGATCCTTCCGCTCAAAAAGAAAAAGATTCTTCAGTTAATAAAGAAAAACAA GAGAAGATACAAAAACAAAAACAAAAAGATCGTTCTGAACTGGTCTTATATATTCACAAT AATGAGCTCATAAAGGGCATAATAGACAAGGCCCAGTTTGGGAAGTATGGGATAGTTCAT ACAGTTCATGAACTCTATGGTGCATATACAGCTGGGATACTGCTCTCGACATTCAGCCGC TTATTTACACTGTTCTTGCAGTTGCATGGGTTTACTTGTGGGGTAGATGACCTGCTACTA TTGCCAGAGAAGGATAAACTGAGAAGTAAAATTCTTAGTGGAAGCGAAGTGCGTAGTAAT GAAGTCCACTGGAAATTTACTGGAGCTGACGAAGATCATAAAGGTGATCTGGTAAAATTG CATATGGAGGTTGAGAAGGCTGTAAGAAGTAACGGTGAATCGGACACGGCTACCTTGGAC AATGATATGAAAAATGCTCTAAATGGGATAACAACCGACGTCAATAAAATATTATTTCCT GATGGTCTACAAAAGCCCTTTCCTGGAAATTGTCTCTCTCTTATGACTACAACTGGAGCT AAAGGTGGTCCGGTTAACATGAATCAAATATCATCATTACTAGGCCAGCAAGAGCTAGAA GGAAAGCGTGTTCCACGGATGGTTTCTGGGAAGACTTTACCGTGCTTTCCGCCATGGGAT ATTTCTTCAAGAGCTGGTGGCTTTATCAGTGATCGATTTTTAACTGGTCTGCGTCCTCAA GAGTATTACTTTCACTGTATGGCAGGCAGAGAGGGGTTGGTTGACACAGCAGTCAAAACA TCCCGTAGTGGATACCTTCAGCGTTGTCTTATCAAATGTCTGGAATCGTTGAAAGTCTCC TATGATCACACGGTTCGGGATGCTGATGGATCAATTGTACAGTTCTGCTATGGAGAAGAT GGAGTTGATGTGCTGAAAACTAGCTTTCTGAACGAGTTCAAAGAACTTGCTGATAACAGA AAAGCTGTCCTTGCCAAGCTCGGTGGCTGCAGTAAGGATCCCACATTATCAAAATGTAAT GGATACATTACTGAACTGCCTCCTAAATTGATTGATAAAGCGGAAGAGTTTCTTAAGCAT TCAAAGGAATGCTGTCGTTACAACATTGAGGCAAAGGAATTAAAGGAGTTACTTAAAGTC AAGTTCCTATCCAGTCTTGTAGATCCTGGTGAGGCTGTTGGTGTGGTTGCTGCTCAGTCA ATAGGAGAACCTTCTACGCAGATGACGCTCAACACTTTTCATCTTGCTGGAAGGGGTGAC ATGAATGTAACTCTTGGTATACCCCGGCTGAAAGAAATACTGATGACTGCATCAGATAAT ATTAGGACGCCTGTTATGAAGTGTCCTTTGCTCGAACATATTTCTGAGGATGATGCTAAA ATGGTGGTTGCAAAGCTTAGGAGGGTTCGTGTGGCTGATGTAGTGGAGAAAATTGAAGTC TGCACAGTTCCTTTTTACAACTCTAATGGGCGTGTTTCAACCCTGTACAAGTTACAGATG AAACTCTATCCACAAGACCAGCTTGAGTCAGGTCTTACTATAGATGAGTGTCAGGCAACC TTGAGAACAGTTTTTGTTGAGGCAATGGAACATGCAATTGAAAAGCATCTAGATCTGCTA TACAAAATAAATGAAATCCGTGCTGTTAAGATAGAAGATACAGAGGGCTCATTATTAAAT GGTGATGAAGAATCTCAAAGTAGACATGCTGATGGAGGAGACACTGGTACTAGTGATGAT GACGATCAAAATGATAATGATGTTGACTTGGGAACTGATGCAGAAAAGATGAAACGGCAA GAGAAAGATGAGATGGAGTATGATGATGATACTGAAACCGAGGAGGGAATGGGTAGCGAA TCTGAGGAGAGCGATGAGGATCCAGCTGAGTCAGGTGATGATTCACAAGAGGCTGACAAA GAACACACGATCTCGAAGTCTGAGACGACTTCAGTGGATGACCTGCCATATTCTGTAAAA AAGGGGAAAAAATCAAAAGATGATCGTGGAACAGCTAAACTAGAAGAGAAAAATCAAAAT GAGGGAAGATTAGATGACCAGAAACAGGGTCAAATAAAGAAGCGC

Peptide Sequence

PEP ID	Zm00001d029055_P029
PEP Infomation	pep chromosome:B73_RefGen_v4:1:56385633:56404970:-1 gene:Zm00001d029055 transcript:Zm00001d029055_T029 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-directed RNA polymerase I subunit 1
Sequence	MADGQHIQAASEEVDSIHFSFYSDDEIKRISIKKITKSERLDAKNLPVPGGLLDPAMGPI NDIDICKSCGQHSVRCPGHFGHIELAKPLFNPLLFMSLKNLLHVTCFHCHKFRLNKEQVD RYVNELELLVKGDIVCAKNLEDSVEEAYLSKEDENMNKTTSGDNSSSVKDKKTWTSIQLK EVLSIFSKIMKKRQKKCAKCDMKSPTISSPIFGWLVKDTKASAVRTNAIADFKLKGDGDI HNSGETGVSGLEEESSSPGMVSKDSINEVRGLSDDTIKELVASSGKKHLLPTEVESILKD LWKNEARFCMLLCDFQKNMSSEPEKRRGYEMFFLSSLLVAPNRFRPSTSSSLGIMEHPQS VLLSKVQESNLALQHNNASSNHMDVLQRWMDLQRSVNVLYDSSKGLARSEKNAHGIRQLL EKKEGILRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPVFATRLTYPEKVTPWNTKRLQ EAIRNGADIHPGATHYRDNNSMYKLQAVPAKRRSIAKMLPASRGSICQPGRDPNCEFESK VVYRHLQDGDIVLVNRQPTLHKPSMMAHFVRVLPGEKTLRMHYANCSTYNADFDGDEMNV HVPQDEISRAEAMNIVDANKQYIGPRSGDAVRGLIQDHIVGAVLLTKPDTLLSREEYSQL VFGSCVPSSNCGSHHPAKVSAIEDYDTLELVHPAIWKPRPLWTGKQVITTILNHLTKGCP PFTVEQKGKIPKEYLKEDPSAQKEKEDPSARKEAHSAKKGKREDPSAQKEKDSSVNKEKQ EKIQKQKQKDRSELVLYIHNNELIKGIIDKAQFGKYGIVHTVHELYGAYTAGILLSTFSR LFTLFLQLHGFTCGVDDLLLLPEKDKLRSKILSGSEVRSNEVHWKFTGADEDHKGDLVKL HMEVEKAVRSNGESDTATLDNDMKNALNGITTDVNKILFPDGLQKPFPGNCLSLMTTTGA KGGPVNMNQISSLLGQQELEGKRVPRMVSGKTLPCFPPWDISSRAGGFISDRFLTGLRPQ EYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKCLESLKVSYDHTVRDADGSIVQFCYGED GVDVLKTSFLNEFKELADNRKAVLAKLGGCSKDPTLSKCNGYITELPPKLIDKAEEFLKH SKECCRYNIEAKELKELLKVKFLSSLVDPGEAVGVVAAQSIGEPSTQMTLNTFHLAGRGD MNVTLGIPRLKEILMTASDNIRTPVMKCPLLEHISEDDAKMVVAKLRRVRVADVVEKIEV CTVPFYNSNGRVSTLYKLQMKLYPQDQLESGLTIDECQATLRTVFVEAMEHAIEKHLDLL YKINEIRAVKIEDTEGSLLNGDEESQSRHADGGDTGTSDDDDQNDNDVDLGTDAEKMKRQ EKDEMEYDDDTETEEGMGSESEESDEDPAESGDDSQEADKEHTISKSETTSVDDLPYSVK KGKKSKDDRGTAKLEEKNQNEGRLDDQKQGQIKKR

Transcript Sequence

Transcript ID	Zm00001d029055_T029
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:56385633:56404970:-1 gene:Zm00001d029055 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-directed RNA polymerase I subunit 1
Sequence	CCCTCTCCACGCCACACGCACGGCTCCATCCTTCTGTCCACGCTCGCGCCGCCAGGGCGC TCGAGCTCGCCGTCGTCATCTCGTCGGGCCGCCGCCTCGCAGCTTCGCCCGCGGCTCTGG TCCGCGCCCCGCCAAGGCCCAGCCCCAAGCTGCCAGCGGCCTCCGGCGTTGCTCGCCGCT CACTGCGCGCCGTCTCGCGCTCTCGCGCCCTCGCCCAGTCCTGCTCTCCCTTCGTCGCTC CGCGGCTCCGCCGGCGTCTGGGCATCCGGCCTTCGGGCTTTGGTGGCGCCCCCCACCGGC CACCGGCCCACCCCAGCGGGCAGCGGCCACTGCAACTCTGCGGCTCTGCCAGGAACAAGG AGGAACAGTGGCGATTCTGCCAGGGACAGGGAGGAGCAGTGGCAGACAACGTCCTTCCTT TTGTTTGGCCCGGGGCTTCGGAATTATCTGGAGCCGCTACTGCCCCCAGCGTTCGGACTC CCGGGTCGCAGGCAGCCACGTCTCGTCCTGGCTCTGGGCTCGCCGCGCTATCGTCTCGGC CATTCGCTCCGACGTCCGTATTCAATAGATTTGCCCTACTCGTGACCACGAGAATCCGGC GAGGAGGGAGACCGCTCGTGCGGAGTCTATAATGGCTGACGGGCAGCATATTCAGGCAGC ATCAGAGGAAGTGGATTCAATCCACTTCAGCTTCTATAGTGATGATGAAATTAAGAGGAT CAGCATTAAAAAGATCACCAAGTCGGAGCGCCTTGATGCCAAAAACCTTCCTGTGCCAGG TGGATTACTGGACCCTGCAATGGGACCTATCAATGATATTGATATCTGCAAGAGTTGTGG TCAGCATTCTGTTCGTTGCCCTGGTCACTTCGGTCATATTGAGTTGGCAAAACCATTGTT CAATCCTTTGCTGTTTATGAGTCTGAAAAACCTTCTCCATGTCACGTGTTTCCATTGTCA CAAGTTCCGCCTGAACAAGGAACAGGTTGACAGATATGTGAATGAACTTGAACTTTTAGT AAAGGGTGATATTGTCTGTGCTAAAAATTTGGAAGACTCAGTAGAAGAAGCATATCTTTC CAAGGAAGATGAAAACATGAACAAGACCACTTCAGGTGATAACTCATCTTCTGTGAAAGA CAAGAAAACCTGGACATCTATCCAATTGAAAGAGGTTTTGTCTATTTTTTCCAAGATAAT GAAAAAGAGACAGAAGAAGTGTGCAAAATGTGACATGAAGAGCCCAACAATCTCAAGTCC TATATTTGGTTGGCTGGTCAAGGACACAAAGGCTTCTGCTGTAAGAACAAATGCAATTGC TGATTTTAAACTCAAGGGAGATGGTGATATTCACAACTCAGGGGAAACAGGGGTTTCTGG TCTTGAGGAAGAGTCATCTTCACCTGGAATGGTGTCTAAAGACTCAATCAATGAAGTTAG AGGTCTTTCTGATGATACAATTAAAGAATTGGTAGCATCATCAGGAAAAAAACATCTATT GCCTACAGAGGTTGAATCTATTCTCAAGGACTTGTGGAAAAATGAAGCTAGGTTCTGCAT GTTACTTTGTGATTTCCAGAAGAATATGTCAAGTGAACCAGAAAAGAGAAGGGGCTATGA AATGTTCTTCTTGAGTAGTCTCCTTGTGGCACCAAATAGATTCCGCCCATCAACTAGCTC TAGTCTTGGAATTATGGAACATCCTCAAAGTGTTCTGCTAAGTAAAGTGCAAGAATCCAA TCTTGCGCTACAACATAACAATGCATCTTCTAACCATATGGATGTTCTTCAAAGATGGAT GGATCTACAACGGAGTGTAAATGTGCTATATGATAGTAGCAAAGGCCTTGCAAGAAGCGA GAAGAATGCTCATGGTATACGCCAGCTATTGGAAAAGAAAGAAGGAATTCTTCGACAAAA GATGATGGGGAAGAGGGTTAATTATGCATGCCGATCTGTTATATCTCCAGATCCGTACTT GGCTGTTAATGAAATTGGCATTCCTCCTGTTTTTGCGACACGATTGACATATCCTGAGAA AGTAACACCCTGGAATACCAAAAGGCTCCAAGAAGCTATAAGGAATGGTGCCGATATACA TCCAGGTGCAACACATTACAGGGACAACAATAGCATGTATAAGTTACAGGCAGTCCCTGC CAAACGCCGTTCCATTGCTAAGATGCTACCTGCATCTAGAGGATCAATTTGTCAGCCAGG GAGAGATCCTAATTGTGAGTTTGAAAGCAAGGTTGTATATCGGCATCTTCAAGATGGTGA CATTGTACTTGTCAATAGGCAGCCTACTCTTCACAAGCCCAGCATGATGGCTCATTTTGT TCGGGTGTTACCTGGAGAAAAGACGTTACGAATGCACTACGCCAATTGCAGCACCTACAA TGCTGATTTTGACGGAGATGAGATGAATGTTCATGTTCCGCAAGATGAAATATCTCGTGC TGAGGCCATGAATATTGTTGACGCAAACAAGCAATACATTGGTCCTAGGAGTGGGGATGC TGTCAGAGGTCTCATACAGGACCACATTGTTGGTGCTGTACTATTGACAAAACCAGACAC ATTGCTAAGCCGTGAAGAATATAGTCAGCTTGTCTTTGGGTCTTGTGTGCCGTCCTCAAA TTGTGGCTCTCATCACCCTGCTAAGGTGTCTGCTATTGAGGATTACGATACACTTGAACT TGTCCATCCTGCTATTTGGAAGCCAAGGCCCTTATGGACAGGAAAACAGGTTATAACAAC CATCTTGAATCATTTAACAAAAGGTTGTCCTCCATTTACTGTGGAGCAGAAGGGAAAAAT ACCAAAAGAATATCTGAAAGAAGATCCTTCCGCTCAAAAGGAAAAAGAAGATCCTTCCGC TCGAAAAGAAGCTCATTCTGCTAAAAAAGGAAAACGAGAAGATCCTTCCGCTCAAAAAGA AAAAGATTCTTCAGTTAATAAAGAAAAACAAGAGAAGATACAAAAACAAAAACAAAAAGA TCGTTCTGAACTGGTCTTATATATTCACAATAATGAGCTCATAAAGGGCATAATAGACAA GGCCCAGTTTGGGAAGTATGGGATAGTTCATACAGTTCATGAACTCTATGGTGCATATAC AGCTGGGATACTGCTCTCGACATTCAGCCGCTTATTTACACTGTTCTTGCAGTTGCATGG GTTTACTTGTGGGGTAGATGACCTGCTACTATTGCCAGAGAAGGATAAACTGAGAAGTAA AATTCTTAGTGGAAGCGAAGTGCGTAGTAATGAAGTCCACTGGAAATTTACTGGAGCTGA CGAAGATCATAAAGGTGATCTGGTAAAATTGCATATGGAGGTTGAGAAGGCTGTAAGAAG TAACGGTGAATCGGACACGGCTACCTTGGACAATGATATGAAAAATGCTCTAAATGGGAT AACAACCGACGTCAATAAAATATTATTTCCTGATGGTCTACAAAAGCCCTTTCCTGGAAA TTGTCTCTCTCTTATGACTACAACTGGAGCTAAAGGTGGTCCGGTTAACATGAATCAAAT ATCATCATTACTAGGCCAGCAAGAGCTAGAAGGAAAGCGTGTTCCACGGATGGTTTCTGG GAAGACTTTACCGTGCTTTCCGCCATGGGATATTTCTTCAAGAGCTGGTGGCTTTATCAG TGATCGATTTTTAACTGGTCTGCGTCCTCAAGAGTATTACTTTCACTGTATGGCAGGCAG AGAGGGGTTGGTTGACACAGCAGTCAAAACATCCCGTAGTGGATACCTTCAGCGTTGTCT TATCAAATGTCTGGAATCGTTGAAAGTCTCCTATGATCACACGGTTCGGGATGCTGATGG ATCAATTGTACAGTTCTGCTATGGAGAAGATGGAGTTGATGTGCTGAAAACTAGCTTTCT GAACGAGTTCAAAGAACTTGCTGATAACAGAAAAGCTGTCCTTGCCAAGCTCGGTGGCTG CAGTAAGGATCCCACATTATCAAAATGTAATGGATACATTACTGAACTGCCTCCTAAATT GATTGATAAAGCGGAAGAGTTTCTTAAGCATTCAAAGGAATGCTGTCGTTACAACATTGA GGCAAAGGAATTAAAGGAGTTACTTAAAGTCAAGTTCCTATCCAGTCTTGTAGATCCTGG TGAGGCTGTTGGTGTGGTTGCTGCTCAGTCAATAGGAGAACCTTCTACGCAGATGACGCT CAACACTTTTCATCTTGCTGGAAGGGGTGACATGAATGTAACTCTTGGTATACCCCGGCT GAAAGAAATACTGATGACTGCATCAGATAATATTAGGACGCCTGTTATGAAGTGTCCTTT GCTCGAACATATTTCTGAGGATGATGCTAAAATGGTGGTTGCAAAGCTTAGGAGGGTTCG TGTGGCTGATGTAGTGGAGAAAATTGAAGTCTGCACAGTTCCTTTTTACAACTCTAATGG GCGTGTTTCAACCCTGTACAAGTTACAGATGAAACTCTATCCACAAGACCAGCTTGAGTC AGGTCTTACTATAGATGAGTGTCAGGCAACCTTGAGAACAGTTTTTGTTGAGGCAATGGA ACATGCAATTGAAAAGCATCTAGATCTGCTATACAAAATAAATGAAATCCGTGCTGTTAA GATAGAAGATACAGAGGGCTCATTATTAAATGGTGATGAAGAATCTCAAAGTAGACATGC TGATGGAGGAGACACTGGTACTAGTGATGATGACGATCAAAATGATAATGATGTTGACTT GGGAACTGATGCAGAAAAGATGAAACGGCAAGAGAAAGATGAGATGGAGTATGATGATGA TACTGAAACCGAGGAGGGAATGGGTAGCGAATCTGAGGAGAGCGATGAGGATCCAGCTGA GTCAGGTGATGATTCACAAGAGGCTGACAAAGAACACACGATCTCGAAGTCTGAGACGAC TTCAGTGGATGACCTGCCATATTCTGTAAAAAAGGGGAAAAAATCAAAAGATGATCGTGG AACAGCTAAACTAGAAGAGAAAAATCAAAATGAGGGAAGATTAGATGACCAGAAACAGGG TCAAATAAAGAAGCGC