Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029027_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:55241838:55244510:1 gene:Zm00001d029027 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ycf54 homolog description: ycf54 homolog
Sequence

ATGGTGACTCCAGCGACATTCTCCCTCCGCCCCAGCGCGCCCCCCGCGCCGCCTCGTGCC
GGGCTGCCCCGCGCTCGGGCCTGTTTCGCGCCCGCCATCCGCACCTCCCCTTCCGTCGCC
TTTTCCTACCAGCCTCGGCGCTTCAGTGGCATCCGCCGCGCCGTGGCCGTCGACTCCGAG
CAGGGCTCCCCCGAGTCTCCAGAGCAGGAGAAGAAGCCCAAGACGTACTACTTCCTGGTG
GCAAACGCCAAGTTCATGCTGGACGAGGAGGAGCATTTCCAGGAGCAACTCGCCGAGAAG
CTGCGCAACTACGCCGAGCGCGACAAGGAGCAGGACTTCTGGCTCGTCGTGGAGCCCAAG
TTCCTCGACAGGTTCCCCAACATCACCAAGCGCCTCAAGCGCCCCGCCGTCGCGCTTGTC
TCCACCGACGGCAACTGGATCACATTCATGAAGTTAAGGCTAGACAGGGTCTTACAAGAC
CAGTTCGACGCAGAATCAGTTGAAGAGGCATTGGCTTCTAACCCTGTTGAGTTGAAATTT
GAGAAGCCTGAGAAATGGACAGCTCCGTACCCTAAATATGGGTTTGGATGGTGGGAACCC
TTCTTGCCTCCAAAGTTCAGCAATGGTACGGCATAG

Peptide Sequence

PEP ID

Zm00001d029027_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:55241838:55244510:1 gene:Zm00001d029027 transcript:Zm00001d029027_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ycf54 homolog description: ycf54 homolog
Sequence

MVTPATFSLRPSAPPAPPRAGLPRARACFAPAIRTSPSVAFSYQPRRFSGIRRAVAVDSE
QGSPESPEQEKKPKTYYFLVANAKFMLDEEEHFQEQLAEKLRNYAERDKEQDFWLVVEPK
FLDRFPNITKRLKRPAVALVSTDGNWITFMKLRLDRVLQDQFDAESVEEALASNPVELKF
EKPEKWTAPYPKYGFGWWEPFLPPKFSNGTA

Transcript Sequence

Transcript ID

Zm00001d029027_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:55241838:55244510:1 gene:Zm00001d029027 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ycf54 homolog description: ycf54 homolog
Sequence

AAGGCTCTCCGCCTCCGCCTCGCAGCCTCCCTTCTATCCTCTCCGGCACGAGCCGTCCAG
TTCAGTTCACCTCGGTCCGGGACCGCGACTACACCGACGGCGGCGCGTCCGAGCCCAGCC
GACGCCGAGCCAATGGTGACTCCAGCGACATTCTCCCTCCGCCCCAGCGCGCCCCCCGCG
CCGCCTCGTGCCGGGCTGCCCCGCGCTCGGGCCTGTTTCGCGCCCGCCATCCGCACCTCC
CCTTCCGTCGCCTTTTCCTACCAGCCTCGGCGCTTCAGTGGCATCCGCCGCGCCGTGGCC
GTCGACTCCGAGCAGGGCTCCCCCGAGTCTCCAGAGCAGGAGAAGAAGCCCAAGACGTAC
TACTTCCTGGTGGCAAACGCCAAGTTCATGCTGGACGAGGAGGAGCATTTCCAGGAGCAA
CTCGCCGAGAAGCTGCGCAACTACGCCGAGCGCGACAAGGAGCAGGACTTCTGGCTCGTC
GTGGAGCCCAAGTTCCTCGACAGGTTCCCCAACATCACCAAGCGCCTCAAGCGCCCCGCC
GTCGCGCTTGTCTCCACCGACGGCAACTGGATCACATTCATGAAGTTAAGGCTAGACAGG
GTCTTACAAGACCAGTTCGACGCAGAATCAGTTGAAGAGGCATTGGCTTCTAACCCTGTT
GAGTTGAAATTTGAGAAGCCTGAGAAATGGACAGCTCCGTACCCTAAATATGGGTTTGGA
TGGTGGGAACCCTTCTTGCCTCCAAAGTTCAGCAATGGTACGGCATAGAGATAAGCAGCA
ATCCCTATGAGGCATGTAAGATTACTCCCCTGTAAGTGATGAATGTAATTTTAATTTTGA
TGATGAGGATGTAGTACTTGAGGTTGTACCAGTACAGTTAGTTGAATTAGTTGCACAGTT
TTTGTAATACCAAATAATCAGCTGTTTTATTTTATTTGAGAAAGTCGCGGTTCTGTTATG
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