Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028998_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:54251798:54253443:-1 gene:Zm00001d028998 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	ATGTTCGGCTTCGGGCACCACGGCCAGAACCCGCCGGCTCACGGCGGCGTGCACCAGCCC ACCTTCAAGATCTTCTGCAAGTCCGACGAGGGGTACTGCCTCACCGTCCGCGACGGCAAC GTGGTGCTGGCCCCCGCCAACCCGCGCGACGAGCACCAGCACTGGTACAAGGACATGCGC TTCAGCACCCAGGTCAAGGACGAGGAGGGCAACCCTGCGTTCGCCCTGGTCAACAAGGCC ACTGGGCTCGCCATCAAGCACTCCCTCGGCCAGTCCCACCCGGTGAAGCTGGTGCCGTTC AACCCGGAGTACCAGGACGAGTCGGTGCTGTGGACGGAGAGCGGCGACGTGGGCAAGGGC TTCCGCTGCATCCGCATGGTGAACAACATCCGCCTCAACTTCGACGCCTTCCACGGCGAC AAGGGCCACGGCGGCGTGCACGACGGCACCACCGTGGTGCTGTGGGAGTGGGCCAAGGGC GACAACCAGAGCTGGAAGATCCTGCCCTGGGGCGACGAAGCCTACGCCGCGGGAGGCAGC AGCGCCGCCAACGCGCCCCGCTTCGGCGGCGGCGGCGAGCCCACCGTCCGCATCTACTGC AAGGCCGACGAGGGGTTCAGCGCCACGGTCCGCAACGGCGCCGTGTGCCTCGCGCCCACC AACCCGCGCGACGAGTACCAGCACTGGATCAAGGACATGCGCCACAGCAACAGCGTCAAG GACGAGGAAGGGTACCCGGCCTTCGCGCTCGTCAACAGGGTCACCGGCGAGGCCATCAAG CACTCCCAGGGCGAGGGCCACCCGGTCAAGCTGGTGCCCTACAACCCCGGCTACCAGGAC GAGTCGGTGCTGTGGACGGAGAGCCGCGACGTCGGCCACGGCTTCCGCTGCGTCCGCATG GTCAACAACATCTACCTCAACTTCGACGCCTTCCACGGCGACAAGGACCACGGCGGCGTG CGCGACGGCACCAACATCGTGCTCTGGAAGTGGTGCGAGGGCGACAACCAGCGCTGGAAG ATCGTCCCCTGGTGTAAGTCTCGCCTCAGCACCCACCCAGGACATTTCTCTCGAATCTTG TTTTTGGAGTAG

Peptide Sequence

PEP ID	Zm00001d028998_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:54251798:54253443:-1 gene:Zm00001d028998 transcript:Zm00001d028998_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	MFGFGHHGQNPPAHGGVHQPTFKIFCKSDEGYCLTVRDGNVVLAPANPRDEHQHWYKDMR FSTQVKDEEGNPAFALVNKATGLAIKHSLGQSHPVKLVPFNPEYQDESVLWTESGDVGKG FRCIRMVNNIRLNFDAFHGDKGHGGVHDGTTVVLWEWAKGDNQSWKILPWGDEAYAAGGS SAANAPRFGGGGEPTVRIYCKADEGFSATVRNGAVCLAPTNPRDEYQHWIKDMRHSNSVK DEEGYPAFALVNRVTGEAIKHSQGEGHPVKLVPYNPGYQDESVLWTESRDVGHGFRCVRM VNNIYLNFDAFHGDKDHGGVRDGTNIVLWKWCEGDNQRWKIVPWCKSRLSTHPGHFSRIL FLE

Transcript Sequence

Transcript ID	Zm00001d028998_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:54251798:54253443:-1 gene:Zm00001d028998 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	CCCAAATCCCCTGTCCCGCTAGCGGCTAGTCCGACCAGGCGATCCCCCCCCAAACCCTCC CCCAAAACCCCAGAGCGGAGAAGAGCGCAAGATGTTCGGCTTCGGGCACCACGGCCAGAA CCCGCCGGCTCACGGCGGCGTGCACCAGCCCACCTTCAAGATCTTCTGCAAGTCCGACGA GGGGTACTGCCTCACCGTCCGCGACGGCAACGTGGTGCTGGCCCCCGCCAACCCGCGCGA CGAGCACCAGCACTGGTACAAGGACATGCGCTTCAGCACCCAGGTCAAGGACGAGGAGGG CAACCCTGCGTTCGCCCTGGTCAACAAGGCCACTGGGCTCGCCATCAAGCACTCCCTCGG CCAGTCCCACCCGGTGAAGCTGGTGCCGTTCAACCCGGAGTACCAGGACGAGTCGGTGCT GTGGACGGAGAGCGGCGACGTGGGCAAGGGCTTCCGCTGCATCCGCATGGTGAACAACAT CCGCCTCAACTTCGACGCCTTCCACGGCGACAAGGGCCACGGCGGCGTGCACGACGGCAC CACCGTGGTGCTGTGGGAGTGGGCCAAGGGCGACAACCAGAGCTGGAAGATCCTGCCCTG GGGCGACGAAGCCTACGCCGCGGGAGGCAGCAGCGCCGCCAACGCGCCCCGCTTCGGCGG CGGCGGCGAGCCCACCGTCCGCATCTACTGCAAGGCCGACGAGGGGTTCAGCGCCACGGT CCGCAACGGCGCCGTGTGCCTCGCGCCCACCAACCCGCGCGACGAGTACCAGCACTGGAT CAAGGACATGCGCCACAGCAACAGCGTCAAGGACGAGGAAGGGTACCCGGCCTTCGCGCT CGTCAACAGGGTCACCGGCGAGGCCATCAAGCACTCCCAGGGCGAGGGCCACCCGGTCAA GCTGGTGCCCTACAACCCCGGCTACCAGGACGAGTCGGTGCTGTGGACGGAGAGCCGCGA CGTCGGCCACGGCTTCCGCTGCGTCCGCATGGTCAACAACATCTACCTCAACTTCGACGC CTTCCACGGCGACAAGGACCACGGCGGCGTGCGCGACGGCACCAACATCGTGCTCTGGAA GTGGTGCGAGGGCGACAACCAGCGCTGGAAGATCGTCCCCTGGTGTAAGTCTCGCCTCAG CACCCACCCAGGACATTTCTCTCGAATCTTGTTTTTGGAGTAGGAAAAAAAAAAAATCAG CGCATCTAATCTTTACCGACCCGCACTACTAGAAGCTTCATAAAGTGATTGTCGGTAGAA ACGGATAGCACATCTCGTTGTTAGACATTTTTTTAAAAAAAAATATTAGTGTACTACTTT GTCAAAAGAAGATTAATGACGTGTTGTTGTTGCTTGCGTCTGCAGAAATGTGCTGTTCTG TGGCTGCACTGGTCATCACCATGATCTGGAGCTTTGAAGGCATAGCCACCTGTGGTCAGC AGCTGCTGCCGTGTTGCTAGAATAAAGTTGGTGGCGATCGATCGATCGATCTGTGGTGAT TGGTGTCCCTCTCTGTGTGTTTGTGTTTAGTTCCCAGTCGTTT