Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028995_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:54034211:54036320:-1 gene:Zm00001d028995 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC-transcription factor 11 description:Arabidopsis NAC domain containing protein 87
Sequence

ATGTCTGAGGTGTCGGTGATAAACCAGGCGGAGGTGGAGGACGCGGGCGCCGGGCAGCTG
ATGGACCTGCCGCCGGGCTTCCGCTTCCACCCCACCGACGAGGAGATCATCTCGCACTAC
CTCACCCACAAGGCCCTCGACCACCGCTTCGTCTCCGGCGTCATCGGCGAGGTCGACCTC
AACAGGATCGAGCCATGGGACCTGCCAGGCAGGGCCAAGATGGGGGAGAAGGAGTGGTAC
TTCTTCTGCCACAAGGATCGCAAGTACCCGACGGGCACGCGGACCAACCGCGCCACGGAG
ACCGGCTACTGGAAGGCCACCGGCAAGGACAAGGAGATCTTCAGGGGCCGCGGCGTCCTC
GTGGGCATGAAGAAGACGCTCGTCTTCTACCGCGGCCGCGCGCCGCGCGGGGAGAAGACC
GGATGGGTCATGCACGAGTTCCGCCTCGAGGGCAGGCTTCCCCAGCCGCTCCCGCGCTCC
GCCAAGGACGAGTGGGCCGTGTGCAAGGTGTTCAACAAGGAGCTGCAGGCGGCGAGGAGC
GAGCCATTATTGGCGGCGGCCGGCGCGGCGGAGCTCGAGCGCGTGGGCTCGCTGGGCTTC
CTCAACGAGCTCCTCGACTCCGCGGAGCTGCCGGCCCTCGTCGGAGCCGACGTGGACGAG
GTGATCGACTTCAAGGGCCCCGCCCCCGCGTCCGTTCCGGACGCGAGCTACCTCCCGGTC
AAGATGGAGGAGCACGCGCTGCTGCAGATGCAGCAGTGCCAGTACCAGCCGCCGCCCCCG
ATGTTCTACCCGAGCCAGTACTTCTCTCTTCCGGCGATGAACTCCGGCCACCTCCCCCCG
GCGATCCGGAGGTACTGCAAGGCGGAGCAGCAGGTGGTCTCGGCGCAGACGGCGTCGGTG
ATCAGCCCGTCCCGCGAGACCGGGCTCAGCACCGACCCCAACGCGGCGGGCGGCTACGCG
GAGATCTCGTCGGCGGCGACCCCGTCGTCGTCGCACCAGTTCCTGCCCGAGCTCGACGAC
CCGGCCCTCAACCTCGCCGACCTCTGGAAGTACTGA

Peptide Sequence

PEP ID

Zm00001d028995_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:54034211:54036320:-1 gene:Zm00001d028995 transcript:Zm00001d028995_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC-transcription factor 11 description:Arabidopsis NAC domain containing protein 87
Sequence

MSEVSVINQAEVEDAGAGQLMDLPPGFRFHPTDEEIISHYLTHKALDHRFVSGVIGEVDL
NRIEPWDLPGRAKMGEKEWYFFCHKDRKYPTGTRTNRATETGYWKATGKDKEIFRGRGVL
VGMKKTLVFYRGRAPRGEKTGWVMHEFRLEGRLPQPLPRSAKDEWAVCKVFNKELQAARS
EPLLAAAGAAELERVGSLGFLNELLDSAELPALVGADVDEVIDFKGPAPASVPDASYLPV
KMEEHALLQMQQCQYQPPPPMFYPSQYFSLPAMNSGHLPPAIRRYCKAEQQVVSAQTASV
ISPSRETGLSTDPNAAGGYAEISSAATPSSSHQFLPELDDPALNLADLWKY

Transcript Sequence

Transcript ID

Zm00001d028995_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:54034211:54036320:-1 gene:Zm00001d028995 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC-transcription factor 11 description:Arabidopsis NAC domain containing protein 87
Sequence

CCAGTCCAAGCCCCCTTGCCTTCTTTCTCAGCTCACCTCTCTCTTTCACGCACGCCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCCTTATCTGTCCTGAGGCAGCCATTTCCTCTTCCGATCGTGGAGAGGCTTGGA
GTGGAAGGAGGCTGCTGGTTTTCGGCACGGCGGAGATGTCTGAGGTGTCGGTGATAAACC
AGGCGGAGGTGGAGGACGCGGGCGCCGGGCAGCTGATGGACCTGCCGCCGGGCTTCCGCT
TCCACCCCACCGACGAGGAGATCATCTCGCACTACCTCACCCACAAGGCCCTCGACCACC
GCTTCGTCTCCGGCGTCATCGGCGAGGTCGACCTCAACAGGATCGAGCCATGGGACCTGC
CAGGCAGGGCCAAGATGGGGGAGAAGGAGTGGTACTTCTTCTGCCACAAGGATCGCAAGT
ACCCGACGGGCACGCGGACCAACCGCGCCACGGAGACCGGCTACTGGAAGGCCACCGGCA
AGGACAAGGAGATCTTCAGGGGCCGCGGCGTCCTCGTGGGCATGAAGAAGACGCTCGTCT
TCTACCGCGGCCGCGCGCCGCGCGGGGAGAAGACCGGATGGGTCATGCACGAGTTCCGCC
TCGAGGGCAGGCTTCCCCAGCCGCTCCCGCGCTCCGCCAAGGACGAGTGGGCCGTGTGCA
AGGTGTTCAACAAGGAGCTGCAGGCGGCGAGGAGCGAGCCATTATTGGCGGCGGCCGGCG
CGGCGGAGCTCGAGCGCGTGGGCTCGCTGGGCTTCCTCAACGAGCTCCTCGACTCCGCGG
AGCTGCCGGCCCTCGTCGGAGCCGACGTGGACGAGGTGATCGACTTCAAGGGCCCCGCCC
CCGCGTCCGTTCCGGACGCGAGCTACCTCCCGGTCAAGATGGAGGAGCACGCGCTGCTGC
AGATGCAGCAGTGCCAGTACCAGCCGCCGCCCCCGATGTTCTACCCGAGCCAGTACTTCT
CTCTTCCGGCGATGAACTCCGGCCACCTCCCCCCGGCGATCCGGAGGTACTGCAAGGCGG
AGCAGCAGGTGGTCTCGGCGCAGACGGCGTCGGTGATCAGCCCGTCCCGCGAGACCGGGC
TCAGCACCGACCCCAACGCGGCGGGCGGCTACGCGGAGATCTCGTCGGCGGCGACCCCGT
CGTCGTCGCACCAGTTCCTGCCCGAGCTCGACGACCCGGCCCTCAACCTCGCCGACCTCT
GGAAGTACTGAAGCCTGGGCGACGATCGACCGGTGGCTGGGCCGCCCACCCGCCCCGGTC
ACGTGGTCTGGTTGGTTAATTTGCTTGATTTGATTGATTATCTTGGTCTCTTGTGGGATC
TGGGGTTGGTGACCGGTTCGCTGATGCGTCCTCGTTCGTCACCTCCGCCAGGTCCGGCCT
CTACTGACCTCGGGTCTGACTAGATTATTATCCGTCCAGACCGCCAGGGGATTAGGGCTT
CCTTGTTAATTAATTAATCCTAGGTTCCTTTGTATTGGTCTCTGTACATAGTACTGGTAC
CCTACTCTGATTGTGTCATTAGCAGTAGCATGATTACTGATAGGATTAATGAAATGGGGG
TAGATTAAGGGGGCCTGCATCTGCGTCAGCAATGCAGTGCGTGGGGGGTTTTACGGGTTG
ATTAGTTAATTTGGGCGCTTGGTGAGCCAGCTAGCGCTAGCTTCATATGTACATGTACTG
CCATTAATTGCTGCTTGAGCTCGACATACCATTATGTGAATTTGATGCTTCAGT