Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028980_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:53451936:53454849:1 gene:Zm00001d028980 gene_biotype:protein_coding transcript_biotype:protein_coding description:Exostosin family protein
Sequence

ATGGCCACCGCCTGCCGGAGCCCGCTCGTCTGGCTCTTCGCGCTCGCCGCCGCGCTATTC
TTCCTCTCCTGGTACCTCCTCCTCAACTCCGCCGCGGGCCCAACCGCCGCCCGCCGCCCC
AACCAGGGGCTCCGCCTCGGCGGCCCCGGTAGGAAATGCGACCCCGCGGAGGCGCTGCTG
CGAGTGTTCATGTACGACCTGCCCCCCGAGTTCCACTTCGGACTGCTCGACTGGAAGCCC
CCGGGCTTCGGCGGCGGCGTGTGGCCCGACGTCAGGGACGGCGTGCCGGACTACCCGGGG
GGGCTCAACCTTCAGCACAGCATCGAGTACTGGCTCACCCTCGACCTCTTGGCCTCCGAG
CAGGGCGCGCCCACGCCCTGCGCAGCGGCGCGGGGTGGTTCCATTCGGCAAGAACTGTAT
TACCTTCTGAAAGACGAGAAAGATGTGCATTTCTCATTTGGAAGTGTAGCTGGTAATGGG
ATCGAGCAGGCAACACAAGGTATGCGGTCATCCAAGTTCTGCCTCAACATTGCAGGTGAC
ACTCCATCCTCCAACCGCCTCTTCGACTCCATTGTCAGTCACTGTGTTCCCGTCATCATC
AGCGATGAGATTGAGCTCCCGTTTGAGGATGTCCTCGACTATTCAAAGTTCAGCGTCATA
GTACGTGGCGCAGATGCAGTCAAGAAGGGGTTTCTAAAGAGCCTGATCAAAGGGATCAGC
CAAGAAGAGTGGACACGCATGTGGAACAAGCTAAAGGAAGTAGAAAAGCACTTCGAGTAC
CAATACCCATCTCAGACTGATGATGCCGTGCAGATGATATGGAAGGCTATTGCTCGGAAG
GTGCCCTCTATCCGTCTGAAGATTAACAGACTACGGAGATTTTCTCGGTTTGATACTAAT
AGGACAGATGAAACTCTACCCAGTCCTTCTTGGCTACAGAATCAGGCTTCTTGA

Peptide Sequence

PEP ID

Zm00001d028980_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:53451936:53454849:1 gene:Zm00001d028980 transcript:Zm00001d028980_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Exostosin family protein
Sequence

MATACRSPLVWLFALAAALFFLSWYLLLNSAAGPTAARRPNQGLRLGGPGRKCDPAEALL
RVFMYDLPPEFHFGLLDWKPPGFGGGVWPDVRDGVPDYPGGLNLQHSIEYWLTLDLLASE
QGAPTPCAAARGGSIRQELYYLLKDEKDVHFSFGSVAGNGIEQATQGMRSSKFCLNIAGD
TPSSNRLFDSIVSHCVPVIISDEIELPFEDVLDYSKFSVIVRGADAVKKGFLKSLIKGIS
QEEWTRMWNKLKEVEKHFEYQYPSQTDDAVQMIWKAIARKVPSIRLKINRLRRFSRFDTN
RTDETLPSPSWLQNQAS

Transcript Sequence

Transcript ID

Zm00001d028980_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:53451936:53454849:1 gene:Zm00001d028980 gene_biotype:protein_coding transcript_biotype:protein_coding description:Exostosin family protein
Sequence

ATGGCCACCGCCTGCCGGAGCCCGCTCGTCTGGCTCTTCGCGCTCGCCGCCGCGCTATTC
TTCCTCTCCTGGTACCTCCTCCTCAACTCCGCCGCGGGCCCAACCGCCGCCCGCCGCCCC
AACCAGGGGCTCCGCCTCGGCGGCCCCGGTAGGAAATGCGACCCCGCGGAGGCGCTGCTG
CGAGTGTTCATGTACGACCTGCCCCCCGAGTTCCACTTCGGACTGCTCGACTGGAAGCCC
CCGGGCTTCGGCGGCGGCGTGTGGCCCGACGTCAGGGACGGCGTGCCGGACTACCCGGGG
GGGCTCAACCTTCAGCACAGCATCGAGTACTGGCTCACCCTCGACCTCTTGGCCTCCGAG
CAGGGCGCGCCCACGCCCTGCGCAGCGGCGCGGGGTGGTTCCATTCGGCAAGAACTGTAT
TACCTTCTGAAAGACGAGAAAGATGTGCATTTCTCATTTGGAAGTGTAGCTGGTAATGGG
ATCGAGCAGGCAACACAAGGTATGCGGTCATCCAAGTTCTGCCTCAACATTGCAGGTGAC
ACTCCATCCTCCAACCGCCTCTTCGACTCCATTGTCAGTCACTGTGTTCCCGTCATCATC
AGCGATGAGATTGAGCTCCCGTTTGAGGATGTCCTCGACTATTCAAAGTTCAGCGTCATA
GTACGTGGCGCAGATGCAGTCAAGAAGGGGTTTCTAAAGAGCCTGATCAAAGGGATCAGC
CAAGAAGAGTGGACACGCATGTGGAACAAGCTAAAGGAAGTAGAAAAGCACTTCGAGTAC
CAATACCCATCTCAGACTGATGATGCCGTGCAGATGATATGGAAGGCTATTGCTCGGAAG
GTGCCCTCTATCCGTCTGAAGATTAACAGACTACGGAGATTTTCTCGGTTTGATACTAAT
AGGACAGATGAAACTCTACCCAGTCCTTCTTGGCTACAGAATCAGGCTTCTTGATTTTTG
GACTAGCAAACTCCAGCTTTCACCATGTTTTCAATCCTGCCGAAACAAGAGTTGATACTG
AAGACCAAACCTTAATCGCATGACTGGGGGCAGATGTTACAGCTGCAGACATTAACGGAG
AGTAAAGTTGAAACACTCTAGCATAACAGAATTACATATCCAATGGCACATCATTTTTCT
TCATTTTTCTTACTTAAGATTCATCCAAAATGTCCTTGGCTGCAGACTAAGGACAATGAA
TTTTGTATGAAAAGCTGTACATTCTAGGCGGCAATATAATTACTGACCAGTTACAGTTGC
TGAGC