Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028923_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:1:51722133:51725178:1 gene:Zm00001d028923 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3
Sequence

ATGGTTGCCTGCACTCAGCCTCGGAGGGTCGCAGCAATGTCAGTCTCCAGGCGTGTGGCG
GAGGAGATGGATGTTACTATTGGGGAAGAAGTGGGTTATAGCATTCGATTTGAGGATTGC
AGCAGCCACAAAACTGTTCTCAAATATTTGACAGATGGTATGCTTCTGAGAGAAGCAATG
GCAGACCCACTTTTAGAGAAGTACAAGGTGATTGTTCTTGATGAGGCTCATGAGAGGACT
TTAGCAACAGATGTTCTGTTTGGGCTTCTGAAGGAAGTTCTAAAAAATAGACCAGATTTG
AAGCTTGTTGTTATGAGTGCTACCCTCGAAGCAGAGAAATTCCAGGGTTACTTCAATGGT
GCACCCTTGATGAAGGTGCCTGGGAGACTTCATCCAGTTGAGATATTTTACACCCAAGAA
CCAGAGAGGGACTACCTAGAGGCTGCTATCAGGACGGTTATGCAAATACATATGTGTGAA
CCTGCTGGTGATATCCTTGTATTCCTTACAGGAGAAGAGGAGATTGAGGATGCATGCCGG
AAAATCAACAAGGAAACTAATAATATGGGAGATCAGGTTGGCCCAGTTAAAGTCGTGCCT
TTGTACTCCACACTGCCCCCAGCCATGCAGCAGAAGATTTTTGAACCTGCTCCTGCCCCA
TTGAAGGAAGGAGGTCCTCCTGGAAGGAAAATTGTTGTGTCCACCAACATTGCTGAAACA
TCCTTAACTATAGATGGCATAGTTTATGTGATAGACCCGGGGTTTTCCAAACAGAAAGTT
TACAACCCAAGAATAAGGGTGGAATCCCTTCTGGTGTCACCCATTTCTAAGGCAAGTGCT
CATCAGAGAGCTGGTCGTGCTGGACGAACACAACCCGGGAAGTGTTTTAGGCTATACACG
GAGAAGAGTTTTAATGAGGATTTGCAACCACAGACATACCCAGAAATTCTTCGGTCGAAC
CTGGCAAATACAGTTCTTACCTTGAAGAAACTTGGAATTGATGATTTAGTGCATTTTGAC
TTTATGGATCCTCCAGCACCAGAAACTCTAATGAGGGCCTTAGAAGTTTTGAACTATTTG
GGTGCACTAGATGATGAAGGTAATCTGACACAGTTAGGTGAGATGATGAGCGAGTTTCCC
CTGGATCCACAAATGTCGAAGATGCTCGTCATCAGTCCAAAATACAACTGTTCGAATGAA
ATCTTATCAGTATCTGCCATGCTGTCAGGTATGCTGATGCAGATAATTGCTGTTTGTTGA

Peptide Sequence

PEP ID

Zm00001d028923_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:1:51722133:51725178:1 gene:Zm00001d028923 transcript:Zm00001d028923_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3
Sequence

MVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAM
ADPLLEKYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFNG
APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVMQIHMCEPAGDILVFLTGEEEIEDACR
KINKETNNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPAPLKEGGPPGRKIVVSTNIAET
SLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYT
EKSFNEDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL
GALDDEGNLTQLGEMMSEFPLDPQMSKMLVISPKYNCSNEILSVSAMLSGMLMQIIAVC

Transcript Sequence

Transcript ID

Zm00001d028923_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:51722133:51725178:1 gene:Zm00001d028923 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3
Sequence

CAGATCCCCCAATTTGTTCTTGAGACGGAAGGCTTGGGTAACCGTTCCATGGTTGCCTGC
ACTCAGCCTCGGAGGGTCGCAGCAATGTCAGTCTCCAGGCGTGTGGCGGAGGAGATGGAT
GTTACTATTGGGGAAGAAGTGGGTTATAGCATTCGATTTGAGGATTGCAGCAGCCACAAA
ACTGTTCTCAAATATTTGACAGATGGTATGCTTCTGAGAGAAGCAATGGCAGACCCACTT
TTAGAGAAGTACAAGGTGATTGTTCTTGATGAGGCTCATGAGAGGACTTTAGCAACAGAT
GTTCTGTTTGGGCTTCTGAAGGAAGTTCTAAAAAATAGACCAGATTTGAAGCTTGTTGTT
ATGAGTGCTACCCTCGAAGCAGAGAAATTCCAGGGTTACTTCAATGGTGCACCCTTGATG
AAGGTGCCTGGGAGACTTCATCCAGTTGAGATATTTTACACCCAAGAACCAGAGAGGGAC
TACCTAGAGGCTGCTATCAGGACGGTTATGCAAATACATATGTGTGAACCTGCTGGTGAT
ATCCTTGTATTCCTTACAGGAGAAGAGGAGATTGAGGATGCATGCCGGAAAATCAACAAG
GAAACTAATAATATGGGAGATCAGGTTGGCCCAGTTAAAGTCGTGCCTTTGTACTCCACA
CTGCCCCCAGCCATGCAGCAGAAGATTTTTGAACCTGCTCCTGCCCCATTGAAGGAAGGA
GGTCCTCCTGGAAGGAAAATTGTTGTGTCCACCAACATTGCTGAAACATCCTTAACTATA
GATGGCATAGTTTATGTGATAGACCCGGGGTTTTCCAAACAGAAAGTTTACAACCCAAGA
ATAAGGGTGGAATCCCTTCTGGTGTCACCCATTTCTAAGGCAAGTGCTCATCAGAGAGCT
GGTCGTGCTGGACGAACACAACCCGGGAAGTGTTTTAGGCTATACACGGAGAAGAGTTTT
AATGAGGATTTGCAACCACAGACATACCCAGAAATTCTTCGGTCGAACCTGGCAAATACA
GTTCTTACCTTGAAGAAACTTGGAATTGATGATTTAGTGCATTTTGACTTTATGGATCCT
CCAGCACCAGAAACTCTAATGAGGGCCTTAGAAGTTTTGAACTATTTGGGTGCACTAGAT
GATGAAGGTAATCTGACACAGTTAGGTGAGATGATGAGCGAGTTTCCCCTGGATCCACAA
ATGTCGAAGATGCTCGTCATCAGTCCAAAATACAACTGTTCGAATGAAATCTTATCAGTA
TCTGCCATGCTGTCAGGTATGCTGATGCAGATAATTGCTGTTTGTTGAATGGTATCGTCT
CGCCTCTTTGCATCTGCTGACCACCGTGGACCTCGTCTGTTATTACCATATTCTTTCTCT
AGCACCCAATTGCTTCCTCCGGCCTAGGGATGCTCAAAAGGCTGCTGATGAGGCGAAGGC
TCGATTTGGCCACATTGACGGGGACCATCTGACGCTTCTGAATGTATACCATGCATACAA
ACAAAACAATGAAGATCCCCAGTGGTGTTACGAGAACTTTGTCAATTCAAGAGCACTTAA
GTCTGCAGACAATGTCAGACAACAGCTTGTTCGCATCATGACTAGATTCAACCTCAAGAT
GTGCAGCACGGATTTCAATAGCCGTGAGTACTATGTCAATATCAGGAAAGCCATGCTTGC
GGGGTATTTCATGCAGGTCGCTCACCTGGAACGAACTGGACATTACCTGACTGTAAAAGA
TAACCAGGTCGTCCATCTTCATCCCTCCAATTGTATGGACCATAAACCAGAGTGGGTCAT
CTATAATGAATATGTCTTGACCACCAGGAATTTCATTCGCACAGTCACCGATATCCGTGG
GGACTGGCTAATTGATATTGCGCCACATTACTATGATCTGAGCAATTTCCCGTCATGTGA
GGCCAAGCGTGTTCTTGAGAGGCTGTATAACAAGCGAGAGAGGGAAAGAGCTGCAAATAG
AGGCTGAGGTTGATACTTCCACAAACCTGGTGCTCTGTAATTCCACCGCAGGTTATCACA
GATAGCTGTCCCATTTGTCTTAGGCAAATGCGTTAGCATGATGTCTCCTACACACCCTAA
TATCTATTGTCTCATCAGCATGATCATTATGTACACAACCTCGAGAAATTCTTTAGCATC
TCAATTAGTTGTGATTCAGATTAATTGTGTG