Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028895_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:49992905:49996375:-1 gene:Zm00001d028895 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chloroplast protease complex P2 description:ATP-dependent Clp protease proteolytic subunit 5 chloroplastic
Sequence	ATGGCGATCGCCACCACTACCTCTTCCTCCTCGCTGACCATTCGTCTCCTCCACCCGAAC CCCAACACTAACCCCGCTCCCAGATCTCTCCAGCTCCTCAGTAGCAGGAGGTGCGCTCGT GCCGCCGTAGCCGGAGGCGCGGTGCCTTACGGGGCTGCTCCCCGGCGTGGGATTTGGTCG ATCAGGTGGAATTTGTTTTTAGCCCTTCGAGCTTCGCGCCGTCTGCCTGAAATGGGCTTG GTTAGGTGCCACGGGGTTTCTAAAGCTGCTCGTGCCTGTGTTAGGGATGACTTGGTGGTG CCGAGGTCTCCCTACTTTCCAGTGGATTCCGCGGCGGGGCAAGAGCGTGGGCCGTCGCCC ATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGTCAGCTTTTCCAGCACAGGATTATCCGG TGCGGTGGTCCTGTTGAGGATGATATGGCCAACATCATTGTAGCACAGCTGCTCTACCTG GACGCTATTGATCCCACTAAGGATATCATTATGTATGTGAATTCACCAGGAGGGTCAGTG ACAGCTGGAATGGCTATATTTGATACAATGAAGCACATCAGGCCTGATGTATCCACTGTT TGTATCGGACTAGCTGCTAGTATGGGAGCTTTTCTACTTAGTGCTGGGACCAAAGGAAAG CGATACAGCTTACCAAACTCGAGGATAATGATCCATCAACCTCTTGGAGGAGCCCAAGGA CAGGAGACTGATCTTGAGATTCAGGCCAATGAGATGCTGCACCACAAGGCTAACTTAAAT GGATATCTTGCATACCACACTGGGCAGCCCCTGGATAAGATCAATGTAGATACTGACCGC GACTACTTTATGAGCGCAAAAGAAGCAAAGGAGTATGGCCTTATTGATGGAGTAATCATG AATCCCCTCAAGGCCCTTCAACCACTTCCAGCTTCCAGTTAG

Peptide Sequence

PEP ID	Zm00001d028895_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:49992905:49996375:-1 gene:Zm00001d028895 transcript:Zm00001d028895_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chloroplast protease complex P2 description:ATP-dependent Clp protease proteolytic subunit 5 chloroplastic
Sequence	MAIATTTSSSSLTIRLLHPNPNTNPAPRSLQLLSSRRCARAAVAGGAVPYGAAPRRGIWS IRWNLFLALRASRRLPEMGLVRCHGVSKAARACVRDDLVVPRSPYFPVDSAAGQERGPSP MVMERFQSVVSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPTKDIIMYVNSPGGSV TAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQG QETDLEIQANEMLHHKANLNGYLAYHTGQPLDKINVDTDRDYFMSAKEAKEYGLIDGVIM NPLKALQPLPASS

Transcript Sequence

Transcript ID	Zm00001d028895_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:49992905:49996375:-1 gene:Zm00001d028895 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chloroplast protease complex P2 description:ATP-dependent Clp protease proteolytic subunit 5 chloroplastic
Sequence	CTCCGCCCAAAACCCCACGCGAGCTCCCAGTCTCCCACTCCATCCATGGCGATCGCCACC ACTACCTCTTCCTCCTCGCTGACCATTCGTCTCCTCCACCCGAACCCCAACACTAACCCC GCTCCCAGATCTCTCCAGCTCCTCAGTAGCAGGAGGTGCGCTCGTGCCGCCGTAGCCGGA GGCGCGGTGCCTTACGGGGCTGCTCCCCGGCGTGGGATTTGGTCGATCAGGTGGAATTTG TTTTTAGCCCTTCGAGCTTCGCGCCGTCTGCCTGAAATGGGCTTGGTTAGGTGCCACGGG GTTTCTAAAGCTGCTCGTGCCTGTGTTAGGGATGACTTGGTGGTGCCGAGGTCTCCCTAC TTTCCAGTGGATTCCGCGGCGGGGCAAGAGCGTGGGCCGTCGCCCATGGTGATGGAGCGG TTCCAGAGCGTCGTCAGTCAGCTTTTCCAGCACAGGATTATCCGGTGCGGTGGTCCTGTT GAGGATGATATGGCCAACATCATTGTAGCACAGCTGCTCTACCTGGACGCTATTGATCCC ACTAAGGATATCATTATGTATGTGAATTCACCAGGAGGGTCAGTGACAGCTGGAATGGCT ATATTTGATACAATGAAGCACATCAGGCCTGATGTATCCACTGTTTGTATCGGACTAGCT GCTAGTATGGGAGCTTTTCTACTTAGTGCTGGGACCAAAGGAAAGCGATACAGCTTACCA AACTCGAGGATAATGATCCATCAACCTCTTGGAGGAGCCCAAGGACAGGAGACTGATCTT GAGATTCAGGCCAATGAGATGCTGCACCACAAGGCTAACTTAAATGGATATCTTGCATAC CACACTGGGCAGCCCCTGGATAAGATCAATGTAGATACTGACCGCGACTACTTTATGAGC GCAAAAGAAGCAAAGGAGTATGGCCTTATTGATGGAGTAATCATGAATCCCCTCAAGGCC CTTCAACCACTTCCAGCTTCCAGTTAGTCATGAAGTGGGCTAGAACTGTCAAACATTTTT GTTTGTTGTATCAATGTGTCTGTTGGAGCCTGGCCACATAATATTCTACATCCAGAGGCG TCAAAGATTGTAAAAAAACAAGAACTACGGTTAGGATATATCCTTGTTGATGGACATTCG AATTGAATTAACAGTATTAAAGAGCCTGGCTACATAACATTCTGCATCCAGAGGCTTCAA AGATTGTAAAAAAAAATTACCGTTGAGTAGATCCACCGAGATTGTAGAGTTTTTGAACTA TTTGGCTTGCATAGTACTCCCTCCGTT