Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028866_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:1:48956622:48959345:-1 gene:Zm00001d028866 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence	ATGGCGGTGTCCTCGCCTTCTTCTGCTCCGGAGAAGAAGAGGAAGTGGTTCCGTTTTCGC CAGGTGACCGACAAGTACCTGCGTGAGGCGAGGAAGATTCTTGCGGCGGCGCCAGAGTGT GGCGGCGGTGACGCGGTGGCGGCGCTCGGCCTGGTCGACGCGGCGCTGGAGCTGTCGCCG CGGATGGAGGCCGCCCTGGAGCTGCGGGCGCGCGCGCTCCTCGCGCTGCGTCGCTACAGG GAGGTCGCGGAGATGCTCCGCGATTACATCCCCAGCTGCGGCAAGTCGTGCTCTGGCGAG GACACCTCCTCGTCCTCGTCGGCGTCCCTCTTGTCCACTGGCTCCGGTGATCTCGGCACG ATCTCCCGCGCCAAGCTCCTCTCGCCCGACCGCCACCGCTCCGACGACGCGGAACCTGAC GCCCGCCCCGTCCGCTCCTTCCGCTGCTTCGACATCTCCGAGCTCAAGCGCCGCGTCCTT GCCGGCCTCTCCAAGAACCCGAACACCGATACCCAGTGGAGGTACTTGGTCCTCGGCCAA GCTTGCTTCCACCTCGGCCTCATCGAGGACGCTATGGTGCTGCTGCAGACCGGCCGCCGC CTCGCTTCGGCGGCGTTCCGCCGCGAGAGCGTGTGCTGGTCGGACGACAGCTTCTCGTCG TCGTCGTCGTCCTCCGCGACCGCCGCGGCTCCCTGCGTCCCGTCCGGCAAGACATCCAGC TCCGGTTGGGCGTTCATAATCCCGGCGACGGAGTCGGAGGCTGTGTCCCAGCTCCTGGCG CACGTGAAGCTCCTGCTCCGGCGCCGCGCGGCTGCCATGGCCGCGCTGGACGCTGGCCTC CCGGCCGAGGCCGTGCGCCATTTCTCCAAGATCCTCGAGGCGCGCCGTGGCGTGCTGCCG CACCCGTTCGCCGCCGCGTGCCTCGTGGGCCGCGCCGCCGCGTTCCAGGCCAGCGGGCGT CCGGCCGACGCCATCGCGGACTGCAACCGCGCGCTCGCTCTGGACCCTGCCTACATCCCG GCGCTCCGCGCCCGCGCCGACCTCCTGCAGTCCGTGGGCGCGCTCGCGGACTGCCTGCGT GACCTGGACCACCTCAAGCTCCTGTACGACGCCGCGCTACGCGACGGCAAGCTCCCGGGG CCCCGGTGGCGGCCGCAGGGCGGCGTGCGGTACCGCGAGATCTCCGGCGCGCACCGCAAG CTGACGGCCCGCATCCAGGGGCTGCGCGGCCGCGTCGCCGCCGGCGAGGCGTGCAACATC GACTACTACCTGCTGCTTGGCGTGCGGCGCGGGTGCACGCGGTCCGAGCTGGAGCGCGCG CACCTGCTGCTCTCCCTGAAGCTCAAGCCCGACCGCGCCGTGGTGTTCGGGGAACGCCTG GAGCTCGTGGACGAGCACCGCGACCTGGAGGCGGTGCGTGACCAGGCGCGCATGTCCGCG CTGCTGCTGTACAGGATGCTGCAGAAGGGGTACTCGTTCGTCATGTCAGCCGTTCTGGAC GAGGAGGCCGCCGAGAGGCAGAGGGCAAAGGACGCCGCGGCCGCGGCCGCGGCCGCAGCT GCCGCGCTGGCGGCCAAGCAGGAAGCTCCGAAGCAGGAACCACCGCCGCCGGTGCCTGAG AAATCCGAGAACACGGAGAGCGGCCGTCCAAGAAGCCCGCCACCGCCAGGGCGCGCGCAG ACGGCGAAACCGAAACCGAAGCCCAAGGCCAAGGCCGCGACCACCACGGCGACAATGCCC AAGGCGGCGGCGGCCGTGACGTCTACGGCCCCTGTTTACCAGGGGGTGTTCTGCCGCGAC ATGGCGGTGGTGGGAACCCTGCTGTCCCGCGGCGGCGGGTTCGACCGCGCTCTCCCGGTG AAGTGCGAGGCAATGAGCTGCTGA

Peptide Sequence

PEP ID	Zm00001d028866_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:1:48956622:48959345:-1 gene:Zm00001d028866 transcript:Zm00001d028866_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence	MAVSSPSSAPEKKRKWFRFRQVTDKYLREARKILAAAPECGGGDAVAALGLVDAALELSP RMEAALELRARALLALRRYREVAEMLRDYIPSCGKSCSGEDTSSSSSASLLSTGSGDLGT ISRAKLLSPDRHRSDDAEPDARPVRSFRCFDISELKRRVLAGLSKNPNTDTQWRYLVLGQ ACFHLGLIEDAMVLLQTGRRLASAAFRRESVCWSDDSFSSSSSSSATAAAPCVPSGKTSS SGWAFIIPATESEAVSQLLAHVKLLLRRRAAAMAALDAGLPAEAVRHFSKILEARRGVLP HPFAAACLVGRAAAFQASGRPADAIADCNRALALDPAYIPALRARADLLQSVGALADCLR DLDHLKLLYDAALRDGKLPGPRWRPQGGVRYREISGAHRKLTARIQGLRGRVAAGEACNI DYYLLLGVRRGCTRSELERAHLLLSLKLKPDRAVVFGERLELVDEHRDLEAVRDQARMSA LLLYRMLQKGYSFVMSAVLDEEAAERQRAKDAAAAAAAAAAALAAKQEAPKQEPPPPVPE KSENTESGRPRSPPPPGRAQTAKPKPKPKAKAATTTATMPKAAAAVTSTAPVYQGVFCRD MAVVGTLLSRGGGFDRALPVKCEAMSC

Transcript Sequence

Transcript ID	Zm00001d028866_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:48956622:48959345:-1 gene:Zm00001d028866 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence	GATCGATTCAGGCTACGCGTGGGGTTGCGTCCATTGATGCGAGGGAGGCAATGGCGGTGT CCTCGCCTTCTTCTGCTCCGGAGAAGAAGAGGAAGTGGTTCCGTTTTCGCCAGGTGACCG ACAAGTACCTGCGTGAGGCGAGGAAGATTCTTGCGGCGGCGCCAGAGTGTGGCGGCGGTG ACGCGGTGGCGGCGCTCGGCCTGGTCGACGCGGCGCTGGAGCTGTCGCCGCGGATGGAGG CCGCCCTGGAGCTGCGGGCGCGCGCGCTCCTCGCGCTGCGTCGCTACAGGGAGGTCGCGG AGATGCTCCGCGATTACATCCCCAGCTGCGGCAAGTCGTGCTCTGGCGAGGACACCTCCT CGTCCTCGTCGGCGTCCCTCTTGTCCACTGGCTCCGGTGATCTCGGCACGATCTCCCGCG CCAAGCTCCTCTCGCCCGACCGCCACCGCTCCGACGACGCGGAACCTGACGCCCGCCCCG TCCGCTCCTTCCGCTGCTTCGACATCTCCGAGCTCAAGCGCCGCGTCCTTGCCGGCCTCT CCAAGAACCCGAACACCGATACCCAGTGGAGGTACTTGGTCCTCGGCCAAGCTTGCTTCC ACCTCGGCCTCATCGAGGACGCTATGGTGCTGCTGCAGACCGGCCGCCGCCTCGCTTCGG CGGCGTTCCGCCGCGAGAGCGTGTGCTGGTCGGACGACAGCTTCTCGTCGTCGTCGTCGT CCTCCGCGACCGCCGCGGCTCCCTGCGTCCCGTCCGGCAAGACATCCAGCTCCGGTTGGG CGTTCATAATCCCGGCGACGGAGTCGGAGGCTGTGTCCCAGCTCCTGGCGCACGTGAAGC TCCTGCTCCGGCGCCGCGCGGCTGCCATGGCCGCGCTGGACGCTGGCCTCCCGGCCGAGG CCGTGCGCCATTTCTCCAAGATCCTCGAGGCGCGCCGTGGCGTGCTGCCGCACCCGTTCG CCGCCGCGTGCCTCGTGGGCCGCGCCGCCGCGTTCCAGGCCAGCGGGCGTCCGGCCGACG CCATCGCGGACTGCAACCGCGCGCTCGCTCTGGACCCTGCCTACATCCCGGCGCTCCGCG CCCGCGCCGACCTCCTGCAGTCCGTGGGCGCGCTCGCGGACTGCCTGCGTGACCTGGACC ACCTCAAGCTCCTGTACGACGCCGCGCTACGCGACGGCAAGCTCCCGGGGCCCCGGTGGC GGCCGCAGGGCGGCGTGCGGTACCGCGAGATCTCCGGCGCGCACCGCAAGCTGACGGCCC GCATCCAGGGGCTGCGCGGCCGCGTCGCCGCCGGCGAGGCGTGCAACATCGACTACTACC TGCTGCTTGGCGTGCGGCGCGGGTGCACGCGGTCCGAGCTGGAGCGCGCGCACCTGCTGC TCTCCCTGAAGCTCAAGCCCGACCGCGCCGTGGTGTTCGGGGAACGCCTGGAGCTCGTGG ACGAGCACCGCGACCTGGAGGCGGTGCGTGACCAGGCGCGCATGTCCGCGCTGCTGCTGT ACAGGATGCTGCAGAAGGGGTACTCGTTCGTCATGTCAGCCGTTCTGGACGAGGAGGCCG CCGAGAGGCAGAGGGCAAAGGACGCCGCGGCCGCGGCCGCGGCCGCAGCTGCCGCGCTGG CGGCCAAGCAGGAAGCTCCGAAGCAGGAACCACCGCCGCCGGTGCCTGAGAAATCCGAGA ACACGGAGAGCGGCCGTCCAAGAAGCCCGCCACCGCCAGGGCGCGCGCAGACGGCGAAAC CGAAACCGAAGCCCAAGGCCAAGGCCGCGACCACCACGGCGACAATGCCCAAGGCGGCGG CGGCCGTGACGTCTACGGCCCCTGTTTACCAGGGGGTGTTCTGCCGCGACATGGCGGTGG TGGGAACCCTGCTGTCCCGCGGCGGCGGGTTCGACCGCGCTCTCCCGGTGAAGTGCGAGG CAATGAGCTGCTGACGAAACGTGACATGTGCGACGTGGCGTGCAAGGACAGGCGCAACGT GAGATCCAGCGAGGTGGCGGGAACGCGGTGATGTGTTTGAATTGTTTGGTCGTCCAGCTC GCTGTGGTACTGTACAGCTGGGGGGGAAGTGAACAGGTGGTATTGGCATTTGGTATTGGG TGGGAGTGGGACTGACGGAGGGGAGAAAGGAAAATGGCGAGTTTTAAGAGGACGGTAATT TTGGCTGCATCTTCATGAATGAGTTGTTACATTGCAGTGC