Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028840_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:1:48333328:48337489:1 gene:Zm00001d028840 gene_biotype:protein_coding transcript_biotype:protein_coding description:DUF4378 domain protein
Sequence

ATGGGGTCGGAGAAGGGTGGAGCGAAGGTTATTGGCGGCGGCGGGATCTTCAACCTATTT
GATTGGAAGCGAAAGTCGCGCAAGAAGCTGTTCTCCAACTCGCCCGAGGGGTCCAAGCTT
GTTAAGAGGAGCGAAGAAACCTTGCTATCAGGGCGTCTCCACTTGGGTGATGATGATGAA
GGAATTGGTGTATCAAGCTTCAAGGGGAGCAGCGACTACAGCTGTGCGTCTTCAGTGACC
GATGAGGAAGTGCGTGAGATGAAGGCGCCAGGTGTGGTGGCCAGGCTCATGGGCTTGGAC
GCCATGCCCACCTCGGGCGTTCCAGAACCGTACTGCACACCTTTCCGAGACACAAGATTG
TTCAGGGACAGCCACAGCCTCAAGAGGAGCCCTGAGTACTCAATGAATGACCAGTTCAGT
CATGTTCCTCAAAGAGTCGATGGCTATATCAGGAAGCCATTGGATCTCCGAGCACCAAAG
ATGCCAAGCAGCCCGATTGAAAGGTTCCAGATGGAAGCATTGCCACCAAGGTCCGCAAAG
CACCTACCCATGTCTCACCATAGATTGTTGTCCCCCATCAAGAATCCAGGTTTCAGTTCA
GCGAGGAATGCTGCCCAGATCATGGAGGAAGCAGCCAAGATTCTTCAGCCAAGGGCACAA
GCCAGCTCTAGGGAGAAAATCTGCTCTTTTAGCCCGGCACGGATTCCTTTGAGAGTTTCG
GAGCCAAGGGAGAGCATTCCTCCTTCTCAGAGAACTGTGCCTCTGAAGCCGCAATCATCC
AGGACCGCTCCTGAGCTGCCAGATGTGAGGTTCTCTAGAGCGCAACAGATGAACCGAAGC
TGGAATAGCGAGGAAGATATTGTCATATTCAGACCTTCAATTGATTCTTATGAGATCAAT
AATCCGAGTTGTTCGAAAAACAAGGGAAAGTCTATTTCTTTGGCAGTCCAGGCAAAGAAC
AATGTCCAGAAGAGGGAAGGTGTAACTGGTTCTGGGAGGAATTCAGGAGTACAAAAAGAG
CATGATGAGCAAAGAGCAAACCAACCATTTAGGACTCAGTCTAATCTCCAGAGAAAGAAG
CCATCGTCGTCTGGCACTTCTTCCCCTGTCCTTCGGCAAAATAATCAGAAACAGAATTCG
TTGGTGACCAGAGGCAAGGTGCCAGCAAACAAGACCGTCTCAACACAACAAGGCAGAAAA
CTAATGGCAGGAGATTCCTCTTCTGGGAAGATCAAGAGTGGAAGCAAGGTATCTAAAGTT
GGTGGCAGAAAAGACATTGTGGAAAGCATAAGTGGTGATAGAGAAGGATCGTCATCAAAC
AACAAGGACTTCCCACAGAAGAAACGGTTGATAGAGAGGAACTCCACAAACGAGAAGGGT
ACATTTGTTCCTGAAAAACCAGTGGGTAAACTTAAGAAGCAGGTTCAACCTAATGTTGTT
ATGGATGAGCACATTAAGTGGAACAAGGAAAGTAAGGATACTACAGATGTCGTGTCATTT
ACTTTCACCTCACCCTTGGTCAAACCGTCGGCAGGACTGTCCAGACTGGTGGGTAAGTGG
GATACAAGAAGCAACCTTGATATGGATGCAGGATGTGATAAAGATGATTCAGATAACAAG
GTTGAAGGTCTGTCATCAGTGGGGCTGAACTTTGTAAATGGTGATGCATTGAGCCTTCTC
CTAGAAAAGAAGCTGAAGGAGCTAACATCAAAAATTGATCCATCAATCACCTTTACGAGA
GGTGACACATTTGTGCCTGCTACTTTTACCTTGGAGGAACCACCAACCTCTTCATGCAGC
AATTGGGGCTCGGAAAGTGGAGTATTTGACTGTAGCCCTTCTGAAGTCAAACCTTCTCAA
TATGATTACTGCCCTTCAGCAAAAGGCCAAATTTTCCGAGGCAGTAAAATAAAGGTGGAA
GAACAAGAATGCAGCAGCATAAGTAATGCAAGGAAGGAACATGAAAATGAAGAGCTAAGT
CCCCTATCTGTGCTTGAACCAACCTCTCTAAGTGAGAGTTGCTGGTCTTCCGAGTGTTCA
GGCAGCAGCGGTGGGGGTAAGAGTTATTCATCAATTTTTGATGTTAAGAATGCCAAAGGG
AATTTCTTGATTGACCCAGCATCAGTTGATATCGAGGCAAAGACAACAACAGACTCAGCC
TCTTCCGCATCCGTAGATACATCAGATATTTCAGATGTCACCCAATGTTCTAAAACATCA
AGACACACAGAGCTGGACTACATTGCAGACGTGTTAAGCAGTGTCAACTTGACAACAGAT
GAACTGGGACCACTCTTTGTCGATCAGGATAGACCAGCTTTGGACTCGTCCCTCTTCCAG
AAATTGGAGAACATGCATGTGTACAACAAACAAGGGAAAGAGCCCTTTTGCCGTGGAGGG
TACAGGCGGCTGTTGTTCGACTGCGTAAATGAGTGCCTGGAGACAAGGCGCACGGCCTAC
TTCCGGGCAGGATATGCAGCATGGAGCAAGGGAGCAGCAGCGCTGATCCGGGGCGTTGAG
GCCCAAGTCTGCAGTGAGATCACCAGCTGGAAGAGCATGGGAGACTGGACGGAGGATGAG
CTTGTCGACAAGGACATGAGCAGCGGGCTGGGCACATGGGTCGACTTCCTGGTGGAGGAG
TTCGAGGCTGGTGTGGAGGTGGAGAACCACGTACTGGGCTCGCTGCTTGACGAGGTCGTC
GCCGACATGGTCGTGGGACGCCACGGCAGGAGTGTAAATTTGTAG

Peptide Sequence

PEP ID

Zm00001d028840_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:1:48333328:48337489:1 gene:Zm00001d028840 transcript:Zm00001d028840_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:DUF4378 domain protein
Sequence

MGSEKGGAKVIGGGGIFNLFDWKRKSRKKLFSNSPEGSKLVKRSEETLLSGRLHLGDDDE
GIGVSSFKGSSDYSCASSVTDEEVREMKAPGVVARLMGLDAMPTSGVPEPYCTPFRDTRL
FRDSHSLKRSPEYSMNDQFSHVPQRVDGYIRKPLDLRAPKMPSSPIERFQMEALPPRSAK
HLPMSHHRLLSPIKNPGFSSARNAAQIMEEAAKILQPRAQASSREKICSFSPARIPLRVS
EPRESIPPSQRTVPLKPQSSRTAPELPDVRFSRAQQMNRSWNSEEDIVIFRPSIDSYEIN
NPSCSKNKGKSISLAVQAKNNVQKREGVTGSGRNSGVQKEHDEQRANQPFRTQSNLQRKK
PSSSGTSSPVLRQNNQKQNSLVTRGKVPANKTVSTQQGRKLMAGDSSSGKIKSGSKVSKV
GGRKDIVESISGDREGSSSNNKDFPQKKRLIERNSTNEKGTFVPEKPVGKLKKQVQPNVV
MDEHIKWNKESKDTTDVVSFTFTSPLVKPSAGLSRLVGKWDTRSNLDMDAGCDKDDSDNK
VEGLSSVGLNFVNGDALSLLLEKKLKELTSKIDPSITFTRGDTFVPATFTLEEPPTSSCS
NWGSESGVFDCSPSEVKPSQYDYCPSAKGQIFRGSKIKVEEQECSSISNARKEHENEELS
PLSVLEPTSLSESCWSSECSGSSGGGKSYSSIFDVKNAKGNFLIDPASVDIEAKTTTDSA
SSASVDTSDISDVTQCSKTSRHTELDYIADVLSSVNLTTDELGPLFVDQDRPALDSSLFQ
KLENMHVYNKQGKEPFCRGGYRRLLFDCVNECLETRRTAYFRAGYAAWSKGAAALIRGVE
AQVCSEITSWKSMGDWTEDELVDKDMSSGLGTWVDFLVEEFEAGVEVENHVLGSLLDEVV
ADMVVGRHGRSVNL

Transcript Sequence

Transcript ID

Zm00001d028840_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:48333328:48337489:1 gene:Zm00001d028840 gene_biotype:protein_coding transcript_biotype:protein_coding description:DUF4378 domain protein
Sequence

GATGCTCCCGGCCGCCTCCGCCCCTCCTCTCCGCCGCCTCCGCTTCGTCCGCGCTGCGCG
GCTGCCTCGAGCTCGAGACCGCGTCGGTGAGCTTCACGAGTAGACGTATATTTTCTTGTT
CGATCTGAAGCAGGCTGTATAGGTGATTTTCTCTTCCTTTTGGGGGGATGCTGCGGAGCG
AACGCTGAGGAGCGACGACGAGTTTTGATTCAGGTGTAGAGGGTTTCTAGAATCGATGGG
GTCGGAGAAGGGTGGAGCGAAGGTTATTGGCGGCGGCGGGATCTTCAACCTATTTGATTG
GAAGCGAAAGTCGCGCAAGAAGCTGTTCTCCAACTCGCCCGAGGGGTCCAAGCTTGTTAA
GAGGAGCGAAGAAACCTTGCTATCAGGGCGTCTCCACTTGGGTGATGATGATGAAGGAAT
TGGTGTATCAAGCTTCAAGGGGAGCAGCGACTACAGCTGTGCGTCTTCAGTGACCGATGA
GGAAGTGCGTGAGATGAAGGCGCCAGGTGTGGTGGCCAGGCTCATGGGCTTGGACGCCAT
GCCCACCTCGGGCGTTCCAGAACCGTACTGCACACCTTTCCGAGACACAAGATTGTTCAG
GGACAGCCACAGCCTCAAGAGGAGCCCTGAGTACTCAATGAATGACCAGTTCAGTCATGT
TCCTCAAAGAGTCGATGGCTATATCAGGAAGCCATTGGATCTCCGAGCACCAAAGATGCC
AAGCAGCCCGATTGAAAGGTTCCAGATGGAAGCATTGCCACCAAGGTCCGCAAAGCACCT
ACCCATGTCTCACCATAGATTGTTGTCCCCCATCAAGAATCCAGGTTTCAGTTCAGCGAG
GAATGCTGCCCAGATCATGGAGGAAGCAGCCAAGATTCTTCAGCCAAGGGCACAAGCCAG
CTCTAGGGAGAAAATCTGCTCTTTTAGCCCGGCACGGATTCCTTTGAGAGTTTCGGAGCC
AAGGGAGAGCATTCCTCCTTCTCAGAGAACTGTGCCTCTGAAGCCGCAATCATCCAGGAC
CGCTCCTGAGCTGCCAGATGTGAGGTTCTCTAGAGCGCAACAGATGAACCGAAGCTGGAA
TAGCGAGGAAGATATTGTCATATTCAGACCTTCAATTGATTCTTATGAGATCAATAATCC
GAGTTGTTCGAAAAACAAGGGAAAGTCTATTTCTTTGGCAGTCCAGGCAAAGAACAATGT
CCAGAAGAGGGAAGGTGTAACTGGTTCTGGGAGGAATTCAGGAGTACAAAAAGAGCATGA
TGAGCAAAGAGCAAACCAACCATTTAGGACTCAGTCTAATCTCCAGAGAAAGAAGCCATC
GTCGTCTGGCACTTCTTCCCCTGTCCTTCGGCAAAATAATCAGAAACAGAATTCGTTGGT
GACCAGAGGCAAGGTGCCAGCAAACAAGACCGTCTCAACACAACAAGGCAGAAAACTAAT
GGCAGGAGATTCCTCTTCTGGGAAGATCAAGAGTGGAAGCAAGGTATCTAAAGTTGGTGG
CAGAAAAGACATTGTGGAAAGCATAAGTGGTGATAGAGAAGGATCGTCATCAAACAACAA
GGACTTCCCACAGAAGAAACGGTTGATAGAGAGGAACTCCACAAACGAGAAGGGTACATT
TGTTCCTGAAAAACCAGTGGGTAAACTTAAGAAGCAGGTTCAACCTAATGTTGTTATGGA
TGAGCACATTAAGTGGAACAAGGAAAGTAAGGATACTACAGATGTCGTGTCATTTACTTT
CACCTCACCCTTGGTCAAACCGTCGGCAGGACTGTCCAGACTGGTGGGTAAGTGGGATAC
AAGAAGCAACCTTGATATGGATGCAGGATGTGATAAAGATGATTCAGATAACAAGGTTGA
AGGTCTGTCATCAGTGGGGCTGAACTTTGTAAATGGTGATGCATTGAGCCTTCTCCTAGA
AAAGAAGCTGAAGGAGCTAACATCAAAAATTGATCCATCAATCACCTTTACGAGAGGTGA
CACATTTGTGCCTGCTACTTTTACCTTGGAGGAACCACCAACCTCTTCATGCAGCAATTG
GGGCTCGGAAAGTGGAGTATTTGACTGTAGCCCTTCTGAAGTCAAACCTTCTCAATATGA
TTACTGCCCTTCAGCAAAAGGCCAAATTTTCCGAGGCAGTAAAATAAAGGTGGAAGAACA
AGAATGCAGCAGCATAAGTAATGCAAGGAAGGAACATGAAAATGAAGAGCTAAGTCCCCT
ATCTGTGCTTGAACCAACCTCTCTAAGTGAGAGTTGCTGGTCTTCCGAGTGTTCAGGCAG
CAGCGGTGGGGGTAAGAGTTATTCATCAATTTTTGATGTTAAGAATGCCAAAGGGAATTT
CTTGATTGACCCAGCATCAGTTGATATCGAGGCAAAGACAACAACAGACTCAGCCTCTTC
CGCATCCGTAGATACATCAGATATTTCAGATGTCACCCAATGTTCTAAAACATCAAGACA
CACAGAGCTGGACTACATTGCAGACGTGTTAAGCAGTGTCAACTTGACAACAGATGAACT
GGGACCACTCTTTGTCGATCAGGATAGACCAGCTTTGGACTCGTCCCTCTTCCAGAAATT
GGAGAACATGCATGTGTACAACAAACAAGGGAAAGAGCCCTTTTGCCGTGGAGGGTACAG
GCGGCTGTTGTTCGACTGCGTAAATGAGTGCCTGGAGACAAGGCGCACGGCCTACTTCCG
GGCAGGATATGCAGCATGGAGCAAGGGAGCAGCAGCGCTGATCCGGGGCGTTGAGGCCCA
AGTCTGCAGTGAGATCACCAGCTGGAAGAGCATGGGAGACTGGACGGAGGATGAGCTTGT
CGACAAGGACATGAGCAGCGGGCTGGGCACATGGGTCGACTTCCTGGTGGAGGAGTTCGA
GGCTGGTGTGGAGGTGGAGAACCACGTACTGGGCTCGCTGCTTGACGAGGTCGTCGCCGA
CATGGTCGTGGGACGCCACGGCAGGAGTGTAAATTTGTAGTTTGAGATGAATCGTGTGGT
TGTTGGTCTGTAATTTTGCTGTTACATATCCCCTATTTATTCTGTCACCCCAGACATGTT
GTTCAGAACAGTGATAAATGTTGTTTACCCAATGAGATAGATAGTTTTCACTTTTCAGCT
CGA