Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028813_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:1:47398585:47403756:1 gene:Zm00001d028813 gene_biotype:protein_coding transcript_biotype:protein_coding description:transducin family protein / WD-40 repeat family protein
Sequence

ATGGTCTGTAGGATTGATGCCTCTAATGGGGCTGTTGTTGGAAAATTTAAATCTTCTTCA
AAGGCAATATCTGCATTAGCTGTGTCATCAGATGGAAATATGTTGGCAACAGCAGCTGGC
CAGTTGAGGACCTTTGACACTTCCAGCAACAAAAAAATTAAAAAATTCTCTGGACATCCA
GTTGCTGTGAGGAGCATGGTCTTTAGCAATGATAGCCAATATGTTTTGTCATCTGGAGTT
GGTGAACGCTATATTGCCATTTGGAAGCTGGGCAGTGGTAAAACCCAGAGCTCAAACTGT
ATTCTGTCGATGGAGCACCCAGCAATGTTTGTGGACTGTAAATGTTCAGACAAAGGAGAA
ATACACATTCTGGCTATTTCTGAGATTGGTGTCTGCTATTTCTGGTCTGCAAATGTTGTG
GATGACCTGCGTAATAAGAAGCCCACCAAGATCATATTATCTGAGTCATCTGTGTCAACA
ACTCATCAAGCATTATCGATATTTGCTGCAAAACTTCAAGGAGTGGATGGGCCTAATTCT
GCCCATGTCCTACTGGCTTATGGGTCTGTAGTGAAACCATCTTTTGATAAACTTTTGGTT
TGTTATGGTACAGATATTAGTTTGGGCATTTCTCAAGATGGAGTTCTCTTGCCAAATACT
CAAACCACCATGGCAAAGAAAGGCCAATCTGTGAAAAAGCATGAAACTGTCATTGCTCTA
GACCGAGCCAATGCTGAAGATGCCATCCTTCCTCTTCCAAAACTCCATACACAGGAAAAG
AAAAGGAAACATGGTGTAACAAAACCCAGTGGCGATGTTGAGCCTGAGATTCATAGTGAC
CTCACCACTACAAGATCTATTCATAAAAGAGTTCCTGTGCAAAGAATTGAAGATGACAGC
ACATGCATCGAGGATATGATGAGGGAGTGTGGCATCATTGAAACTAGAGTAGATGAGAGC
ATGAAGGGCCATGCTGGTATACCCTTTAACATTTTGTCTTGTCTCTTTGGTGATGGCAGC
ATAAAAGTCGATGCCAATTTACCCAGTAAGAAGATTCGAGGTCATCTAAGATCATTAAAA
CCTGGAGATGCTTGCAAACTTCTTGATAAATTAGTATCTGCATGGAAAACGAGATCTGGT
AGCACGGAACTTGTATTGCGTTGGATATACTGCCTGTTAGTCATTCATGGCCGTTTTATC
TGCTCCGAGGAATCGATTAACAACCTGGAGAAGATGTGTGCAGAAAGATACACAGTTACT
GAAGATTTGCTGAAGCTTTCTGGGCGGCTTCGGTTAATAACAGCACAGGTCGACAAGGCT
GCTAGTAACATGTCTGAGCCGACATCAGGGGAGATGCAGGATGCTGCTTTCCAGTCTGAC
GAAGAGGAGGAAGATGAAGATGTTGATGAAACAGTATTCGGTCAAGATTCAGATTCGTCA
CAAAATAGCGGCACCGACGACGATGCAAAGTAG

Peptide Sequence

PEP ID

Zm00001d028813_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:1:47398585:47403756:1 gene:Zm00001d028813 transcript:Zm00001d028813_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:transducin family protein / WD-40 repeat family protein
Sequence

MVCRIDASNGAVVGKFKSSSKAISALAVSSDGNMLATAAGQLRTFDTSSNKKIKKFSGHP
VAVRSMVFSNDSQYVLSSGVGERYIAIWKLGSGKTQSSNCILSMEHPAMFVDCKCSDKGE
IHILAISEIGVCYFWSANVVDDLRNKKPTKIILSESSVSTTHQALSIFAAKLQGVDGPNS
AHVLLAYGSVVKPSFDKLLVCYGTDISLGISQDGVLLPNTQTTMAKKGQSVKKHETVIAL
DRANAEDAILPLPKLHTQEKKRKHGVTKPSGDVEPEIHSDLTTTRSIHKRVPVQRIEDDS
TCIEDMMRECGIIETRVDESMKGHAGIPFNILSCLFGDGSIKVDANLPSKKIRGHLRSLK
PGDACKLLDKLVSAWKTRSGSTELVLRWIYCLLVIHGRFICSEESINNLEKMCAERYTVT
EDLLKLSGRLRLITAQVDKAASNMSEPTSGEMQDAAFQSDEEEEDEDVDETVFGQDSDSS
QNSGTDDDAK

Transcript Sequence

Transcript ID

Zm00001d028813_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:47398585:47403756:1 gene:Zm00001d028813 gene_biotype:protein_coding transcript_biotype:protein_coding description:transducin family protein / WD-40 repeat family protein
Sequence

ACCGCATCCTTCCACAAAACCCTTTCTTCCTTCCGCCGCCGCCGCGACCGGCTAAACCCT
TCATTTCGCCGCAGCGACGACCACCCGCCGCGGGCCAACTATGGCGCCCGTTGCGGCTCC
CATACGCGACCTGCTTACCTCTTTCAGCCCCGGCGCGGACTTCCTCGCGCTCTCTTCTGG
GGACGGCCGCATCAAGGTATGGGACGCCGTGCGGGGCCGGCTGCAGACCGAGTTTGCTGA
CATCCCTGCAGTGGAGGCGGTCGCGGTCGCTGAGTCGAAGCGCGGCCACCTCGCCCTCGA
TTACACCTGCATGAAGTGGGTACAACTTTCCAGTAAGGCAGTGGAGATGTGCTTGCACTT
GATGTTGCCGCGGGACATTGGAAGTGGAAGGTCAGCGATTGCCACCCTGGGGGTGTGACA
GCTGTAGAATACTCGAAACATGGGCGGAATGTGTACACGGCAGGTGCTGATGGCATGGTC
TGTAGGATTGATGCCTCTAATGGGGCTGTTGTTGGAAAATTTAAATCTTCTTCAAAGGCA
ATATCTGCATTAGCTGTGTCATCAGATGGAAATATGTTGGCAACAGCAGCTGGCCAGTTG
AGGACCTTTGACACTTCCAGCAACAAAAAAATTAAAAAATTCTCTGGACATCCAGTTGCT
GTGAGGAGCATGGTCTTTAGCAATGATAGCCAATATGTTTTGTCATCTGGAGTTGGTGAA
CGCTATATTGCCATTTGGAAGCTGGGCAGTGGTAAAACCCAGAGCTCAAACTGTATTCTG
TCGATGGAGCACCCAGCAATGTTTGTGGACTGTAAATGTTCAGACAAAGGAGAAATACAC
ATTCTGGCTATTTCTGAGATTGGTGTCTGCTATTTCTGGTCTGCAAATGTTGTGGATGAC
CTGCGTAATAAGAAGCCCACCAAGATCATATTATCTGAGTCATCTGTGTCAACAACTCAT
CAAGCATTATCGATATTTGCTGCAAAACTTCAAGGAGTGGATGGGCCTAATTCTGCCCAT
GTCCTACTGGCTTATGGGTCTGTAGTGAAACCATCTTTTGATAAACTTTTGGTTTGTTAT
GGTACAGATATTAGTTTGGGCATTTCTCAAGATGGAGTTCTCTTGCCAAATACTCAAACC
ACCATGGCAAAGAAAGGCCAATCTGTGAAAAAGCATGAAACTGTCATTGCTCTAGACCGA
GCCAATGCTGAAGATGCCATCCTTCCTCTTCCAAAACTCCATACACAGGAAAAGAAAAGG
AAACATGGTGTAACAAAACCCAGTGGCGATGTTGAGCCTGAGATTCATAGTGACCTCACC
ACTACAAGATCTATTCATAAAAGAGTTCCTGTGCAAAGAATTGAAGATGACAGCACATGC
ATCGAGGATATGATGAGGGAGTGTGGCATCATTGAAACTAGAGTAGATGAGAGCATGAAG
GGCCATGCTGGTATACCCTTTAACATTTTGTCTTGTCTCTTTGGTGATGGCAGCATAAAA
GTCGATGCCAATTTACCCAGTAAGAAGATTCGAGGTCATCTAAGATCATTAAAACCTGGA
GATGCTTGCAAACTTCTTGATAAATTAGTATCTGCATGGAAAACGAGATCTGGTAGCACG
GAACTTGTATTGCGTTGGATATACTGCCTGTTAGTCATTCATGGCCGTTTTATCTGCTCC
GAGGAATCGATTAACAACCTGGAGAAGATGTGTGCAGAAAGATACACAGTTACTGAAGAT
TTGCTGAAGCTTTCTGGGCGGCTTCGGTTAATAACAGCACAGGTCGACAAGGCTGCTAGT
AACATGTCTGAGCCGACATCAGGGGAGATGCAGGATGCTGCTTTCCAGTCTGACGAAGAG
GAGGAAGATGAAGATGTTGATGAAACAGTATTCGGTCAAGATTCAGATTCGTCACAAAAT
AGCGGCACCGACGACGATGCAAAGTAGACTCACTGCTGGTATTCATCATTATGGTGATTG
TATTGTTTTTAATTAAATTGCCAAGCTTGATTTTTGTCAAGGCGACGTTGGAAGGTTGCA
CAGAATTTTGACAGTGTCTCTGGTTTCATTTTGAAAGCACTCGAAGTTGTCTCCTCCTTT
ACCCCTTTTTCCTTATATACGACGGCAATTGGTTAAAG