Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028812_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:1:47211777:47217612:-1 gene:Zm00001d028812 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein
Sequence	ATGGAGTCCAGCGCTAAGAAGCTTAGCAGCCTCCGTATCACCTCACTGGATGGCGATGAT GACGAAACCGAGGACCCGCATCAGCCCCCTCCAGCAGGACCCTCCGCCGCTGCAGCAGAT TCTGATGACGACGATGAAGAGGAAGAAGCGGAAGTGACTCTTGGTGTCCTTAGCAAACCG AAACACCCAGGCCTCCTTCTCCGCCACTTGTTCCCCAGCAAGGCCGGCGGCATCCCGGCG TGGCTAGACCCCGTGAACTTGCCGTCGGGGAAGTCCAGCTGCTGCGGTTTTTGTGGCGAG CCTTTGCAGTTTGTTCTTCAGATTTATGCAGCAGTTGAAGACAATGTAGCAGCCTTCCAT CGAACTCTGTTCATGTTCATGTGCCCATCCATGGCGTGCTTGCTTCGAGATCAACATGAA CAATGGAAGCACAAGCATGGGAATCCATGTAGAAGCGTGAAGGTTTTCCGGTGTCAATTG CCACGGACTAATGCCTTCTACTCAGCTCAACCTCCAAAGCATGACCGGTCTGACAAACCA CTGTGTCCAGGAGGGTTAATGTTACTAAATTCTTTCAAATGCCTAAATATTTGTTGCCAG CCCATGTATGCCACTGGTGTGGTACCTGGAAAGGTGATAAAATATGTAGTAGCTGTAAGA AAGCAAGATACTGTTCTGAGAAACATCAGGTATGCACTGCATTGGCGTACTGGTCATAAA AATGATTGCCTCCAGATAATAAGTTCTTCTGCTGCTTCAAATTCAGTTTTGCCAACTGTT GGAAAAGTTCCTGCTAACACTTTTTGGCCAGAATTTGAGATAAAAATAGACTATGAAGGT AGATTTGATTCCGATAGTGGTGATGAGAATAACTCGAAGTTGTTGGTGATGCAAAGACAT GGGAAACCTGATGCTATGATGCAGTCATGGATGGATCAATTTGAGGCTGATTCTGACAAC AAATGCTGGGCATCTTTTCAAGAGCGGGTCTCAAGAGCACCAAATCAAGTGTTGAGGTAT TGTCGAGAACCAAATGCTAAACCTCTCTGGGCGTTATCTTCTGGGTGTCCATCAAATGCT GATATCCCATCATGTAGCTACTGTAAAGGTCCATTATGTTATGAATTTCAGGTTGGCCAA ATTTCTAGTTTATGA

Peptide Sequence

PEP ID	Zm00001d028812_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:1:47211777:47217612:-1 gene:Zm00001d028812 transcript:Zm00001d028812_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein
Sequence	MESSAKKLSSLRITSLDGDDDETEDPHQPPPAGPSAAAADSDDDDEEEEAEVTLGVLSKP KHPGLLLRHLFPSKAGGIPAWLDPVNLPSGKSSCCGFCGEPLQFVLQIYAAVEDNVAAFH RTLFMFMCPSMACLLRDQHEQWKHKHGNPCRSVKVFRCQLPRTNAFYSAQPPKHDRSDKP LCPGGLMLLNSFKCLNICCQPMYATGVVPGKVIKYVVAVRKQDTVLRNIRYALHWRTGHK NDCLQIISSSAASNSVLPTVGKVPANTFWPEFEIKIDYEGRFDSDSGDENNSKLLVMQRH GKPDAMMQSWMDQFEADSDNKCWASFQERVSRAPNQVLRYCREPNAKPLWALSSGCPSNA DIPSCSYCKGPLCYEFQVGQISSL

Transcript Sequence

Transcript ID	Zm00001d028812_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:47211777:47217612:-1 gene:Zm00001d028812 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein
Sequence	GCGCGCCGTTTGCCGTTTGGGCTCGGTTGCCCCATGCCCCGGTCAGTTTCACACGGCTGA AGCCAGCCGGAACGTGTTGAGGAGGGGTGGGGGATAGGGTTTTTTCGCAAGCCAGCGAGG CAGCGACCGTTTTGTCACCGCAACACCCCCGCCGACTCCCTCGCCGCCGCCAGGAATGGA GTCCAGCGCTAAGAAGCTTAGCAGCCTCCGTATCACCTCACTGGATGGCGATGATGACGA AACCGAGGACCCGCATCAGCCCCCTCCAGCAGGACCCTCCGCCGCTGCAGCAGATTCTGA TGACGACGATGAAGAGGAAGAAGCGGAAGTGACTCTTGGTGTCCTTAGCAAACCGAAACA CCCAGGCCTCCTTCTCCGCCACTTGTTCCCCAGCAAGGCCGGCGGCATCCCGGCGTGGCT AGACCCCGTGAACTTGCCGTCGGGGAAGTCCAGCTGCTGCGGTTTTTGTGGCGAGCCTTT GCAGTTTGTTCTTCAGATTTATGCAGCAGTTGAAGACAATGTAGCAGCCTTCCATCGAAC TCTGTTCATGTTCATGTGCCCATCCATGGCGTGCTTGCTTCGAGATCAACATGAACAATG GAAGCACAAGCATGGGAATCCATGTAGAAGCGTGAAGGTTTTCCGGTGTCAATTGCCACG GACTAATGCCTTCTACTCAGCTCAACCTCCAAAGCATGACCGGTCTGACAAACCACTGTG TCCAGGAGGGTTAATGTTACTAAATTCTTTCAAATGCCTAAATATTTGTTGCCAGCCCAT GTATGCCACTGGTGTGGTACCTGGAAAGGTGATAAAATATGTAGTAGCTGTAAGAAAGCA AGATACTGTTCTGAGAAACATCAGGTATGCACTGCATTGGCGTACTGGTCATAAAAATGA TTGCCTCCAGATAATAAGTTCTTCTGCTGCTTCAAATTCAGTTTTGCCAACTGTTGGAAA AGTTCCTGCTAACACTTTTTGGCCAGAATTTGAGATAAAAATAGACTATGAAGGTAGATT TGATTCCGATAGTGGTGATGAGAATAACTCGAAGTTGTTGGTGATGCAAAGACATGGGAA ACCTGATGCTATGATGCAGTCATGGATGGATCAATTTGAGGCTGATTCTGACAACAAATG CTGGGCATCTTTTCAAGAGCGGGTCTCAAGAGCACCAAATCAAGTGTTGAGGTATTGTCG AGAACCAAATGCTAAACCTCTCTGGGCGTTATCTTCTGGGTGTCCATCAAATGCTGATAT CCCATCATGTAGCTACTGTAAAGGTCCATTATGTTATGAATTTCAGGTTGGCCAAATTTC TAGTTTATGACCACAATTCATCTTTGATCTTTCATTATAGTAGTTGCTCCCTCCATCCAA AAACATAGTCTGTTTTAGTTTTGCCTTTCAATGTTCTCTAACTTTGACCAAATTTATAGA AAAAATATATTACATCTACTGCACTAAATAAATACACCATGAAGATATTAACAATATATA AACTACTTTTATGCTGACATGTTGTATATTTTTTTCTCGAACATGAAGGACAGTTGTGTA GCACTATATTAAGAAAAGGGGCAAGAACCCTTATGGTACACACCTGACACCCAACCACAC TTGGTTACTTAGAAAACATATGTGCCTTTTTATACAACAAGCATGACATCGACCACAACT ACAAAAAATCAGAACACCTATTGTTTATAGGCCGGCTCTAGGGCAAGAAGGAATGATATG CCCTGAGCTCGCGTCAAACTCCAAAACCCCACCCCATAGGCGAGCAACAAGGCTCCAGCC AGGTTCGTGGCATGCCATCGAACACACACCGATTGTGATGATTCCAAATCGACCAAGCTC CCAGAGTTATAATCGAATCCAGCCCCTTCCTGGCCAAGCAGTAACCCTCAACTCCACTCT AGTCCACCAGTCATCAAATGACATGTTGTAGATATTCTTTCATTTTTCTGTAAGCTTAGT CAAAGTTTTACTTAGGAGAAAATTAAAATGACCTAGATTTGGAAACGAAGTATATCCAAT ATCTCATAGGCATTCCACTAGAAGGATCAAACCTCCAAAAAAAAAATCATTTATACACTG AACCAGTATCATCAAATCTAAAATTTAGGATTCAAAGGTTCTACTTACGTATATGTTATG TTTTCCAGGTAATGCCACAATTGCTATATTTCTTTGTTGTGGGAAATCAACCAGACTCCC TTGACTGGGCAACAATTGCTGTCTACACGTGTCAAGGGGCATGTGACCAAAGTGTTAGCT ACAAAGAGGAGTTTGCTTGGGTTCAATTGTACCCTACAACAACTACGAGGCAATAATAAT GTTTGCCTATTCCTTGCTGTCCAATGCTGCAGGTTTCTTGTAATAAAAAGGATGAAATGT CAATAAATTTTCCATCGTCTTTTAGGTGTCAAAAAGTTTGCAGAAAGTCAGAAACAATTC AGTAAATACCCCCGCCAGAAGAATTGGAGGTTGGGATGCTCGAGGCAGTGAGTAGTGAGA GCTTCTTGATTCCCATTATTGCACTTATGCCGAGTATAGATATTTTAAGTTTCACATGTT CTACATTTTAGGTGCCTGATTTTTTTTGTTCAGGCAACAGGCAATTTTGTTGTTTGAATA TAGAAAAAACATGAATTGTCTCTTGTGAGTTATCTTTTTAATTGTACTAGTTGGTTGTAT AAGGTTGTTGCATGCTCAAAACGCAGGCACTTGAAATATAGTAACTCTCAACCATGTGCA TCTATGTGAAGTGGCTTGTAGCTTTGGAGGAAGAATTGAGTCAAAACGGAATATTGCACT TTAAGTTCTTATACATGGATCTAAGAGTTTCATGACTCCTGTGTCCACCAAATGGGTTGG CCTTTTTCAATGTTATGGTTTGCAATTAGTGTTGAGTTGGCGGGCTTTATCTGTAGTATT AATTAATTGTGCCGCATCAAGTGCGAGTCAGGTAAAAAAGAATCGTGAAATGTGGCTGAG AAGTTCTGAACTCGATTTAATCCTTTCCAAACCCCCTTCGATTCAGACGCAACCGAACAA GCGCTAAGTGGGCCACTCTGTGGTTGGGTCGACATTGTTTCTCCTTGATGGAACTACTCT CATGCCTGCAACCATGTCGACCTGCATTACCAAAGAGTCTTTACTAACTTCTGTTATGCT TTCTTGTATGGCCAGGGAGTTGACAGGAACCGTCTGCAAGTACGTACCTCCTTTTGGTAC TAGAGTTTCTGAGATAGGGAGGAGTGGCTTCAATGTTTCCAGGTCTATTGGTCGTGAGGA GACCGTGGGTCCCAGACACATGGTCGTTACATCGCCTTTGGTCCATTTTAGGCACTACCA TAGGGCCCATGTAGATGTGATGGCTATAGGGGGTGTTTGGTTTCTAAGGACTAATATTTA GTCCCTTCATTTTATTCCTTTTAAGTTTTAGTTTCTATATTTGGTAATTTTGGAACTAAA ATGGAATAAAATGTAGGGACTAAACATTAGTCCCTACAAACCAAACACCCCAATAGTTGC ATATGCTTCCATTTTTTGTGGTGGCCACCATGTGTGGTTTATTAGTGTTCGTGCCGTTGA AAGGCTTTGTTGTTTTTTCATCTCTAAAAGGATCCTTGGTAAGCTATTTTTGTTCGCTTA GTCTCACTCAGAAGGTGCTCGCATGCATGTGAACATTTCCGACGATGGTTCATCGGCGAA AGATTTGATTTTAATAAAACGGAACATTATGGCAT