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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028806_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:46955327:46956671:1 gene:Zm00001d028806 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tassel seed2 description:Sex determination protein tasselseed-2

Sequence

ATGCACGCTAGCCTCGCCTCCTACGCCGCGGCAGCTATGCCGGCGCTGGACCTCCGCCCC
GAGATAGCGCACGCGCACCAGCCCGTCATGTCGCCCTCTCACCACGGCTGGGACGGCAAT
GGCGCCACAGCCGTGCCCACACCGATGCCCAAGAGGCTGGACGGGAAGGTGGCCATTGTG
ACGGGCGGCGCGCGCGGGATCGGCGAGGCCATCGTGCGGCTGTTCGCCAAGCACGGGGCC
CGGGTGGTGATCGCGGACATCGACGACGCCGCGGGGGAGGCGCTGGCGTCGGCGCTGGGC
CCGCAGGTCAGCTTCGTGCGCTGCGACGTGTCCGTGGAGGACGACGTCCGGCGCGCCGTG
GACTGGGCGCTGTCGCGCCACGGCGGCCGCCTCGACGTCTACTGCAACAACGCCGGGGTG
CTGGGCCGCCAGACGCGCGCCGCCAGGAGCATCCTGTCCTTCGACGCGGCCGAGTTCGAC
CGCGTGCTCCGCGTCAACGCGCTGGGCGCCGCGCTCGGGATGAAGCACGCGGCGCGCGCC
ATGGCGCCGCGCCGCGCGGGGAGCATCGTCTCCGTCGCCAGCGTCGCGGCCGTGCTGGGC
GGCCTCGGCCCGCACGCCTACACCGCCTCCAAGCACGCCATCGTCGGGCTCACCAAGAAC
GCCGCCTGCGAGCTGGGCGCGCACGGGGTCCGGGTCAACTGCGTCTCGCCCTTCGGCGTC
GCCACGCCCATGCTCATCAACGCCTGGCGCCAGGGCCACGACGACGCCACCGCCGACGCC
GACCGAGACCTCGACCTCGACCTCGACGTCACCGTGCCCAGCGACCAGGAGGTGGAGAAG
ATGGAGGAGGTGGTCAGGGGCCTGGCCACGCTCAAGGGCCCCACGCTCAGGCCCAGGGAC
ATCGCCGAGGCGGTGCTCTTCCTGGCCAGCGACGAGGCCAGGTATATATCGGGCCACAAC
CTTGTCGTGGACGGCGGCGTCACCACATCCAGGAACCTCATCGGCTTGTGA

Peptide Sequence

PEP ID

Zm00001d028806_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:46955327:46956671:1 gene:Zm00001d028806 transcript:Zm00001d028806_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tassel seed2 description:Sex determination protein tasselseed-2

Sequence

MHASLASYAAAAMPALDLRPEIAHAHQPVMSPSHHGWDGNGATAVPTPMPKRLDGKVAIV
TGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQVSFVRCDVSVEDDVRRAV
DWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARA
MAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELGAHGVRVNCVSPFGV
ATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKMEEVVRGLATLKGPTLRPRD
IAEAVLFLASDEARYISGHNLVVDGGVTTSRNLIGL

Transcript Sequence

Transcript ID

Zm00001d028806_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:46955327:46956671:1 gene:Zm00001d028806 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tassel seed2 description:Sex determination protein tasselseed-2

Sequence

ACAGCAGAGTAGAGTAGCACACGCACTCGCCTCTTGTGTCTTTCTTTGTGAGCTGTGGTG
TGGTGGTCGAGACACACACAGCAGCAGCAACAACAACATACATACATGCACGCTAGCCTC
GCCTCCTACGCCGCGGCAGCTATGCCGGCGCTGGACCTCCGCCCCGAGATAGCGCACGCG
CACCAGCCCGTCATGTCGCCCTCTCACCACGGCTGGGACGGCAATGGCGCCACAGCCGTG
CCCACACCGATGCCCAAGAGGCTGGACGGGAAGGTGGCCATTGTGACGGGCGGCGCGCGC
GGGATCGGCGAGGCCATCGTGCGGCTGTTCGCCAAGCACGGGGCCCGGGTGGTGATCGCG
GACATCGACGACGCCGCGGGGGAGGCGCTGGCGTCGGCGCTGGGCCCGCAGGTCAGCTTC
GTGCGCTGCGACGTGTCCGTGGAGGACGACGTCCGGCGCGCCGTGGACTGGGCGCTGTCG
CGCCACGGCGGCCGCCTCGACGTCTACTGCAACAACGCCGGGGTGCTGGGCCGCCAGACG
CGCGCCGCCAGGAGCATCCTGTCCTTCGACGCGGCCGAGTTCGACCGCGTGCTCCGCGTC
AACGCGCTGGGCGCCGCGCTCGGGATGAAGCACGCGGCGCGCGCCATGGCGCCGCGCCGC
GCGGGGAGCATCGTCTCCGTCGCCAGCGTCGCGGCCGTGCTGGGCGGCCTCGGCCCGCAC
GCCTACACCGCCTCCAAGCACGCCATCGTCGGGCTCACCAAGAACGCCGCCTGCGAGCTG
GGCGCGCACGGGGTCCGGGTCAACTGCGTCTCGCCCTTCGGCGTCGCCACGCCCATGCTC
ATCAACGCCTGGCGCCAGGGCCACGACGACGCCACCGCCGACGCCGACCGAGACCTCGAC
CTCGACCTCGACGTCACCGTGCCCAGCGACCAGGAGGTGGAGAAGATGGAGGAGGTGGTC
AGGGGCCTGGCCACGCTCAAGGGCCCCACGCTCAGGCCCAGGGACATCGCCGAGGCGGTG
CTCTTCCTGGCCAGCGACGAGGCCAGGTATATATCGGGCCACAACCTTGTCGTGGACGGC
GGCGTCACCACATCCAGGAACCTCATCGGCTTGTGAATCAATGTCAATCCGTTCCAAATA
TCCCATTCCCATGGCTAGGCTAATTAGAGAAGGAGAGAGAGAAAACTGCTATTAGTTGTA
CTTGAAGTGATCGATTTTCATTTGGTTGATTGATTCATCAACAAAAGTGTTCC