Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028785_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:46379532:46380892:-1 gene:Zm00001d028785 gene_biotype:protein_coding transcript_biotype:protein_coding description:DUF538 family protein
Sequence

ATGGACGAGATCATGAACAAGGTGGGCGCTTACTGGCTGGGGCAGAGGGCCAACAAGGAG
ATCTCCTCGGCAGGCGACGACCTCGATTCGCTCTCTACCAGCGTCGGGGATGGAGCGAAA
TGGCTGGTGAACAAGCTGAAGGGCAAGATGCAGAAGCCGCTGGCGGACCTGCTCAAGGAG
CACAACCTCCCCGTGGGCCTGTTCCCGCGCGAGGCGACCAACTACGAGTTCGTGCCAGAG
ACGCGGCGCCTGACGGTGTACATCCCGTCCCCCTGCGAGGTCGGCTACCGCGACGGCTCC
GAGCTGCGGTTCGACGCCACGGTGTCTGGCACGCTGGGCGAGGGCCGCCTCACGGAGGTG
GAAGGGATCAAGACCAAGGTGCTCGTCTGGGCCAGGGTCACCGCCGTCAAGGCCGACGCC
GCCAAGGTCCACTTCACCGCTGGGATCAAGAGGTCGCGCAGCCGGGACGCCTACGAGGTC
GTCAGGGGCGGCATCACCGTCGACGAGTTCTAG

Peptide Sequence

PEP ID

Zm00001d028785_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:46379532:46380892:-1 gene:Zm00001d028785 transcript:Zm00001d028785_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:DUF538 family protein
Sequence

MDEIMNKVGAYWLGQRANKEISSAGDDLDSLSTSVGDGAKWLVNKLKGKMQKPLADLLKE
HNLPVGLFPREATNYEFVPETRRLTVYIPSPCEVGYRDGSELRFDATVSGTLGEGRLTEV
EGIKTKVLVWARVTAVKADAAKVHFTAGIKRSRSRDAYEVVRGGITVDEF

Transcript Sequence

Transcript ID

Zm00001d028785_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:46379532:46380892:-1 gene:Zm00001d028785 gene_biotype:protein_coding transcript_biotype:protein_coding description:DUF538 family protein
Sequence

GGCTTTGATCCGGTCGCATCCAACGCACGACCTGTTGAACCAGGGCGCGCCCTCCCAGGG
TTCCTTTCTTCTCCGTCTCCGCGTAGGCGTAGCGAAGAAGCTAACCTAGAATCAAAGAGA
TCGCACGCAAGAGGGAGCACCGGAGCAGCGAGCCAGCGACAGCAGCAGAGAGATCGCCGG
GGCCGCTCGCCTGTCTGGAGAGAGAAAGGAAACAAGAGATGGACGAGATCATGAACAAGG
TGGGCGCTTACTGGCTGGGGCAGAGGGCCAACAAGGAGATCTCCTCGGCAGGCGACGACC
TCGATTCGCTCTCTACCAGCGTCGGGGATGGAGCGAAATGGCTGGTGAACAAGCTGAAGG
GCAAGATGCAGAAGCCGCTGGCGGACCTGCTCAAGGAGCACAACCTCCCCGTGGGCCTGT
TCCCGCGCGAGGCGACCAACTACGAGTTCGTGCCAGAGACGCGGCGCCTGACGGTGTACA
TCCCGTCCCCCTGCGAGGTCGGCTACCGCGACGGCTCCGAGCTGCGGTTCGACGCCACGG
TGTCTGGCACGCTGGGCGAGGGCCGCCTCACGGAGGTGGAAGGGATCAAGACCAAGGTGC
TCGTCTGGGCCAGGGTCACCGCCGTCAAGGCCGACGCCGCCAAGGTCCACTTCACCGCTG
GGATCAAGAGGTCGCGCAGCCGGGACGCCTACGAGGTCGTCAGGGGCGGCATCACCGTCG
ACGAGTTCTAGCTTAGTTTTGCTTTCGCGGCTCACATGGATGGACAGGCTTCGTCTTGCT
CGCTGCACGCTGAGAAGGACAGATTGTTGCTTTCAGTTGCAGGAATAAATTCTACACCCA
TTAGCTATGTGGGAGATCTGCGTGCACCGTATATCGTGTGTTTTGGGTTTTGCTGTGAGA
ATCTAACACTTGAAGGATTCAGAAGGTGTGCTCGTTGCTTATGATATATGTTGTTCACTT
GTTTTTAATATCTTCGGGTATTAGAAAACAAGACAATATAATGAGATTAAGGTCC