Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028769_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:1:46006894:46011253:1 gene:Zm00001d028769 gene_biotype:protein_coding transcript_biotype:protein_coding description:tetratricopeptide repeat (TPR)-containing protein
Sequence	ATGACCAATAACTTCCTCACGACGATAAAGAGCCTGAAGCTGATCGAGGGTTGCAAAGCC GCACAATTATACGCCTTAAGCTCCGTTGGGGCAGCCTCCACGTCCGGCTCGGGGGATGCC GGAGGGAGCAGCAACGGCAAGCCCCAGCCTCCTCCGCCGCCAAAGACCATCTCGATGCGG TCCGGATCGCTGTACTACCCGCACGCGGCGCCGTCCACGTCGGGCGCCTTCGTGCCCGAG CCGCACCTGCCGTGCGGCCTCCCGGTGGCCGACGCCCTCGAGCCGGCCCTGGACGCGTGC CTGCGCCCCGTCGACCACGTCGGCGTGCTCGCCGCGTCGTACCGGCGGGTCTCGGCCGCC ACGGCGGGGGGCGACGACGACCTCTGCGACGCGTACCTGGAGCAGCACGCGCTGTTCCAG TCGATCGGCGACGCGAGGCTGATCCGGCGGGCGCTGCGGGCCGCGCGCGTCCACGCGGAC AACCCGCACCGGCGCGCCGTGCTCGCCGCGTGGCTCCGGTACGAGCGCCGCGAGGACGAG CTCGACCCGGCGCCGCCGCCGCTCGCGCCCTGCACCGCGACGACGCCGCTGCTCGAGTGC CCCCGCGCCGCTGTCTTCGCCAGCGTGTCCCACTCCCACAGCGTGGACCCGGTCTGCCCG TGCCGCCGCCCACCGCTTCCTCCAGTCACCCCTCCACCGCACCGCCTGAGGCGCAACACG TCGGGCGCCGCCTCCGAGATGAGCGAGGAGGAGGAGCCGGAGACCAATGACCTGTGGTTC ATCATCGGCGAGGAGGAGGTAGCGTGCGAGCGGTCGTGCATCGCGGCGCTCTCAAAGCCG CTCAACACCCTCCTCTACGGCGGGTTCGCCGAGGCGCACCGCGACCGGATCGACTTCTCC CGCGACGGCATCACGCCGCGCGGCATGCGCGCGGTCTCCGCCTACAGCCGCCACGGCCGC GTGGACGACTTCCCGCCCGACGTCATCTCCCAGCTCCTCGCATTCGCCAACAAGTTCTGC TGCGAGGGCCTGAAGGCAGCTTGCGACAACCAGCTCGCGGCCATGGTGCGGGGTCTCGAC GACGCCCGGTCCCTCATCGACATCGGCCTCGAGGAGGCCTCCCACCTCCTCGTCGCCTCC TGCCTCCAGGCGTTCCTGCGGGAGCTCCCCAAGTCGCTCACGTGCCCGGACATCGCGCGC CTGCTCTGCAGCCCAGAGGGGCGAGAGCGCCTTGACATCTCCGGTAACGCGTCCTTCGCG CTCTACCACTTCCTCTCTTACGTCGCCATGGAGCAGGACATGAGGTCGAACACCACGGTG ATGCTGCTGGAGAGGCTGAATGAATTCGCGGAGCAGCCATGGCAGAAGCAGCTGGCACTG CACCAGCTCGGGTGCGTGATGCTCCAGCGCGGCGAGTTCGAGGAAGCGCAGGAGTGGTTC GAGGCCGCCGTCGGCGAGGGCCATGTGTACTCGGTCGCCGGAGAGGCACGTGCCAAGTAC AAGCGCGGGCACAAGTACGCCGCGTACAAGCTAATGAACAGTATTCTCGGCGAGTACGAC GAACCCGCCGGGTGGATGTACCAAGAGCGCTCCCTGTACTGTGTCGGCAAGGAGAAGTTG GCTGATCTGCAGGCGGCGACGGAGCTGGACCCTACGATGACATTCCCGTACAAATATCGT GCGTGCGCGCTGCTGGAGGAGGACAATGCTGCGTCCGCGATCGCAGAGATCAGCAGGGTC GTCGGTTTCAAGATGGCGACCGATTGCCTTGAGCTCCGGGCGTGGTTCTACCTTGCGCTT GAGCAGTGCGAGCTGGCTGTGCAGGACGTGAGGGCGATATTGACGTTGGATCCAACCTAC ATGATGTTCCACGGGAGAATGCACGGGGAGCAGCTGATTGAGCTCCTCCGAGGACAGGTG CAGCAGTGGGATATGGCGGATTGCTGGATGCAGCTGTACGGTCGGTGGTCGGCGGTGGAT GACATCGGCTCTCTGGCGGTTGTCCAGCAGATGCTCTCCAGGGAACCCGGAAACAGCAGC TTGCGGTTTCGACAGTCACTTCTCCTTCTAAGGCTAAACTGTCAGAAAGCTGCCATGCGC AGTTTGCGATATGCTCGGAACAGCACGCTCCATGAGCATGAGAGGCTCGTATACGAAGGG TGGATTCTGTATGACAGTGGGCATCGCGACGAAGCGTTAGCCAAGGCCGAGCAGTCGATC GGACTCCAGAGATCATTCGAAGCCTTCTTCCTCAAGGCGTACGCCTTAGGAGATTCTAGC CTTGACACGGAATCCTCGCTCTCCGTGGTCCAGCTTCTGGAACATGCCAACAGCTGTGCT TCCGACAACCTTCGCAAGGGGCAGGCATACAACAACATGGGGAGCATCTACGTGGACTGT GACATGCTGGACGAGGCTGCCGAGTGCTACGGCATCGCGCTGAACATAAAGCACACACGG GCGCATCAGGGCCTAGCTCGAGTCCACTACTTGAAAAACAGGAAAAAGGTTGCGTTTGAG GAGATGACGAAGCTCGTGGAGATTGCCAGCAACTGCGCGTCGGCGTATGAAAAGCGGTCG GAATACGGTGAGCGCGAAGCTGCGAGGAGCGACCTGAACATGGCGACGCTTCTTGATCCT ACCAGGACTTATCCTTACAGATACAGAGCAGCTGTACTGATGGACGAGGGCAAGGAGGAG GAGGCGATCGCGGAGCTGTCAGGAGCCATAGCTTTCAAGCCGGACCTCCAGCTGCTGCAC CTCCGCGCGGCGTTCTTCGACTCCATGGGCGAGCGCGAGAGCGCCCTGCGGGACTGCGAG GCCGCGCTCTGCCTGGACCCGACCCACGGCGACACATTGGAGCTGTACAGCAAAGCCTCC ACCACCAAGGCCGAACCCCAGAGCTAG

Peptide Sequence

PEP ID	Zm00001d028769_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:1:46006894:46011253:1 gene:Zm00001d028769 transcript:Zm00001d028769_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:tetratricopeptide repeat (TPR)-containing protein
Sequence	MTNNFLTTIKSLKLIEGCKAAQLYALSSVGAASTSGSGDAGGSSNGKPQPPPPPKTISMR SGSLYYPHAAPSTSGAFVPEPHLPCGLPVADALEPALDACLRPVDHVGVLAASYRRVSAA TAGGDDDLCDAYLEQHALFQSIGDARLIRRALRAARVHADNPHRRAVLAAWLRYERREDE LDPAPPPLAPCTATTPLLECPRAAVFASVSHSHSVDPVCPCRRPPLPPVTPPPHRLRRNT SGAASEMSEEEEPETNDLWFIIGEEEVACERSCIAALSKPLNTLLYGGFAEAHRDRIDFS RDGITPRGMRAVSAYSRHGRVDDFPPDVISQLLAFANKFCCEGLKAACDNQLAAMVRGLD DARSLIDIGLEEASHLLVASCLQAFLRELPKSLTCPDIARLLCSPEGRERLDISGNASFA LYHFLSYVAMEQDMRSNTTVMLLERLNEFAEQPWQKQLALHQLGCVMLQRGEFEEAQEWF EAAVGEGHVYSVAGEARAKYKRGHKYAAYKLMNSILGEYDEPAGWMYQERSLYCVGKEKL ADLQAATELDPTMTFPYKYRACALLEEDNAASAIAEISRVVGFKMATDCLELRAWFYLAL EQCELAVQDVRAILTLDPTYMMFHGRMHGEQLIELLRGQVQQWDMADCWMQLYGRWSAVD DIGSLAVVQQMLSREPGNSSLRFRQSLLLLRLNCQKAAMRSLRYARNSTLHEHERLVYEG WILYDSGHRDEALAKAEQSIGLQRSFEAFFLKAYALGDSSLDTESSLSVVQLLEHANSCA SDNLRKGQAYNNMGSIYVDCDMLDEAAECYGIALNIKHTRAHQGLARVHYLKNRKKVAFE EMTKLVEIASNCASAYEKRSEYGEREAARSDLNMATLLDPTRTYPYRYRAAVLMDEGKEE EAIAELSGAIAFKPDLQLLHLRAAFFDSMGERESALRDCEAALCLDPTHGDTLELYSKAS TTKAEPQS

Transcript Sequence

Transcript ID	Zm00001d028769_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:46006894:46011253:1 gene:Zm00001d028769 gene_biotype:protein_coding transcript_biotype:protein_coding description:tetratricopeptide repeat (TPR)-containing protein
Sequence	GCCCCCCGCAACCAACGGCATTACACAGGTCACGCCTGGGTGCACGGCGGGGACGCGCGG CCGGGCGGGAGGGCGGGGGCGACGCGCGCGCACCAGCCGTTCCGCCGGAGAACTCCCGCT CTGGCACGATCGTCGCCGTGCGACAGGCTGCTGGCCAAACGCGCGCGCGATAGCCGAGGG GAGGAGGACGTAGAGGAGGGGTAAGCCGGCTGCGGAATTCACCATGACCAATAACTTCCT CACGACGATAAAGAGCCTGAAGCTGATCGAGGGTTGCAAAGCCGCACAATTATACGCCTT AAGCTCCGTTGGGGCAGCCTCCACGTCCGGCTCGGGGGATGCCGGAGGGAGCAGCAACGG CAAGCCCCAGCCTCCTCCGCCGCCAAAGACCATCTCGATGCGGTCCGGATCGCTGTACTA CCCGCACGCGGCGCCGTCCACGTCGGGCGCCTTCGTGCCCGAGCCGCACCTGCCGTGCGG CCTCCCGGTGGCCGACGCCCTCGAGCCGGCCCTGGACGCGTGCCTGCGCCCCGTCGACCA CGTCGGCGTGCTCGCCGCGTCGTACCGGCGGGTCTCGGCCGCCACGGCGGGGGGCGACGA CGACCTCTGCGACGCGTACCTGGAGCAGCACGCGCTGTTCCAGTCGATCGGCGACGCGAG GCTGATCCGGCGGGCGCTGCGGGCCGCGCGCGTCCACGCGGACAACCCGCACCGGCGCGC CGTGCTCGCCGCGTGGCTCCGGTACGAGCGCCGCGAGGACGAGCTCGACCCGGCGCCGCC GCCGCTCGCGCCCTGCACCGCGACGACGCCGCTGCTCGAGTGCCCCCGCGCCGCTGTCTT CGCCAGCGTGTCCCACTCCCACAGCGTGGACCCGGTCTGCCCGTGCCGCCGCCCACCGCT TCCTCCAGTCACCCCTCCACCGCACCGCCTGAGGCGCAACACGTCGGGCGCCGCCTCCGA GATGAGCGAGGAGGAGGAGCCGGAGACCAATGACCTGTGGTTCATCATCGGCGAGGAGGA GGTAGCGTGCGAGCGGTCGTGCATCGCGGCGCTCTCAAAGCCGCTCAACACCCTCCTCTA CGGCGGGTTCGCCGAGGCGCACCGCGACCGGATCGACTTCTCCCGCGACGGCATCACGCC GCGCGGCATGCGCGCGGTCTCCGCCTACAGCCGCCACGGCCGCGTGGACGACTTCCCGCC CGACGTCATCTCCCAGCTCCTCGCATTCGCCAACAAGTTCTGCTGCGAGGGCCTGAAGGC AGCTTGCGACAACCAGCTCGCGGCCATGGTGCGGGGTCTCGACGACGCCCGGTCCCTCAT CGACATCGGCCTCGAGGAGGCCTCCCACCTCCTCGTCGCCTCCTGCCTCCAGGCGTTCCT GCGGGAGCTCCCCAAGTCGCTCACGTGCCCGGACATCGCGCGCCTGCTCTGCAGCCCAGA GGGGCGAGAGCGCCTTGACATCTCCGGTAACGCGTCCTTCGCGCTCTACCACTTCCTCTC TTACGTCGCCATGGAGCAGGACATGAGGTCGAACACCACGGTGATGCTGCTGGAGAGGCT GAATGAATTCGCGGAGCAGCCATGGCAGAAGCAGCTGGCACTGCACCAGCTCGGGTGCGT GATGCTCCAGCGCGGCGAGTTCGAGGAAGCGCAGGAGTGGTTCGAGGCCGCCGTCGGCGA GGGCCATGTGTACTCGGTCGCCGGAGAGGCACGTGCCAAGTACAAGCGCGGGCACAAGTA CGCCGCGTACAAGCTAATGAACAGTATTCTCGGCGAGTACGACGAACCCGCCGGGTGGAT GTACCAAGAGCGCTCCCTGTACTGTGTCGGCAAGGAGAAGTTGGCTGATCTGCAGGCGGC GACGGAGCTGGACCCTACGATGACATTCCCGTACAAATATCGTGCGTGCGCGCTGCTGGA GGAGGACAATGCTGCGTCCGCGATCGCAGAGATCAGCAGGGTCGTCGGTTTCAAGATGGC GACCGATTGCCTTGAGCTCCGGGCGTGGTTCTACCTTGCGCTTGAGCAGTGCGAGCTGGC TGTGCAGGACGTGAGGGCGATATTGACGTTGGATCCAACCTACATGATGTTCCACGGGAG AATGCACGGGGAGCAGCTGATTGAGCTCCTCCGAGGACAGGTGCAGCAGTGGGATATGGC GGATTGCTGGATGCAGCTGTACGGTCGGTGGTCGGCGGTGGATGACATCGGCTCTCTGGC GGTTGTCCAGCAGATGCTCTCCAGGGAACCCGGAAACAGCAGCTTGCGGTTTCGACAGTC ACTTCTCCTTCTAAGGCTAAACTGTCAGAAAGCTGCCATGCGCAGTTTGCGATATGCTCG GAACAGCACGCTCCATGAGCATGAGAGGCTCGTATACGAAGGGTGGATTCTGTATGACAG TGGGCATCGCGACGAAGCGTTAGCCAAGGCCGAGCAGTCGATCGGACTCCAGAGATCATT CGAAGCCTTCTTCCTCAAGGCGTACGCCTTAGGAGATTCTAGCCTTGACACGGAATCCTC GCTCTCCGTGGTCCAGCTTCTGGAACATGCCAACAGCTGTGCTTCCGACAACCTTCGCAA GGGGCAGGCATACAACAACATGGGGAGCATCTACGTGGACTGTGACATGCTGGACGAGGC TGCCGAGTGCTACGGCATCGCGCTGAACATAAAGCACACACGGGCGCATCAGGGCCTAGC TCGAGTCCACTACTTGAAAAACAGGAAAAAGGTTGCGTTTGAGGAGATGACGAAGCTCGT GGAGATTGCCAGCAACTGCGCGTCGGCGTATGAAAAGCGGTCGGAATACGGTGAGCGCGA AGCTGCGAGGAGCGACCTGAACATGGCGACGCTTCTTGATCCTACCAGGACTTATCCTTA CAGATACAGAGCAGCTGTACTGATGGACGAGGGCAAGGAGGAGGAGGCGATCGCGGAGCT GTCAGGAGCCATAGCTTTCAAGCCGGACCTCCAGCTGCTGCACCTCCGCGCGGCGTTCTT CGACTCCATGGGCGAGCGCGAGAGCGCCCTGCGGGACTGCGAGGCCGCGCTCTGCCTGGA CCCGACCCACGGCGACACATTGGAGCTGTACAGCAAAGCCTCCACCACCAAGGCCGAACC CCAGAGCTAGGCAGCCAGCCGGCCGGCCGGCCGGCAGGCCGCCGCTCTCCTCGTCGTCGA TTCAGCTGCGGTTTTTGCGAGGCAGGATGATGAGACGATCTCTTCTCTACTCTCATGGGG TGGAAGCTGCAGATCAGTGAGGCAGGAGCACCGGAACATGCACATATCTCTTCTAAGAGT ATATACAAGAGCCTTAGTTCTGTTACTGTTAGAGTTGGACATGGGGAGGCAGCACCGCAG GAGATTGAGTGCGTGTTGCCTTAAGGGTAGACTGCGCAGGTGAGGTGACAAAGAGCATGC ACTGCACTGCACTGCACCACATATGTGCATCCAAGGTTGAAGACGACCAGCACCTCCGGT CAGAAGAGAGGAAGGAGAGGCGGCTGGAGAATGAGAGCCAGGTCAGCAGGGTGTGCAAAC CGCCGGCGGTACCAACGAATCTTCCTCTTTTTCTTCTTTTGCTTGAATTTATGCCTTGTG ACGTGCATCTGGAGGCACGACTGATTACAAAAGAATACGAGTTTTTTTAAAGTAACGCAG CGCGAAAGGGAAGATTCTTCCTGCTGCCGACTGCACGCTGTATTATGTATGAGTCGTGGC TCCGTCGTGCCTCCAGCTAACGAGGCCCTGACATGCATCTGCTGCATTGCTACACGTTCG TTCGTGTTCACAACTACGCTTTGTTCTTTCGTTCCAATTCCAAATCACCGACCGCAGCTT GTTCAGCTAGTACTTTGTTATTT