Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028757_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:1:45719786:45723263:1 gene:Zm00001d028757 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor bHLH140
Sequence

ATGGTGGTACTGGTGGGCCCACCGGGCAGCGGCAAGTCCACGTTTGCAGATGCCGTGGTT
GGCGGCTCCACCGCCGGCCGCCACTGGGTTCGCGTCTGCCAGGATACAATAGGGAACGGC
AAAGCTGGGACAAAAATACAGTGCTTGAAGGCTGCATCAGATGCTTTGAAGGAGGGCAAG
AGTGTTCTTGTCGACCGCTGCAACTTGGAACGTGAGCAGCGTGCTGATTTTGTGAAGCTG
GGAGGCACATTGCGCGCAGATGTGCACGCTGTCTCCCTGGATCTACCTGCAAAGGTCTGT
ATCTCACGTGCAGTGAGCCGAAAGGGCCATGAAGGAAATCTGCAGGGTGGGAAGGCTGCC
CTTGTTGTGAACCGCATGCTGCAGAAGAAGGAGACACCCTTGCTCACAGAAGGTTTCAGT
CGGATCATGTGCTGTAATGATGATGGCGACATTAAAAAAGCAGTTGACTTGTATAATGGT
TTAGGGCCTTCAGATAGTCTTCCATCAGGAGTTTTTGGTCAGAAGAGCAAAAGACCCGTA
CAAGTTGGTATAATGAAGTTTCTAAAGAAAACTGATGCTTCTGTTGTTGAGACATCTAGC
GGACCTAAGCAGGCATTGACAGAAATAAAGCCAGCGCAGCAAAATCCTTTGCCAAAACAG
GAAAATGTTGAAGCTGGTTTTGCCTGTTCCATGGAAGTTGAGAAGGGATTAAATGACAAG
ATGGAAAATGAAGAGCATGCTAAAGGAAGTGATTATTGTGATGTTGGTTCCCGTACTCTG
GCATTTCCATCTATTTCTACAGCTGACTTCCAATTTGATCTTGACAGAGCATCTGATATT
ATAGTGGACACAGCTGCTAATTTCTTGCAGAAGTTTGATAATATAAGACTAGTTCTTGTA
GACCTGAGTGAGAAATCAAGAATTTTGTCATTGGTCAAACAGAAGGCTGCTAAGAAGAGC
ATCGACTCCAACAGATTTTTCACATACGTGGGAGATATCACTCAGTTGCACACAAAAGGA
GGTCTTCAGTGCAGCGTGATTGGTAATGCTGCCAATTGGAGGCTAAAACCTGGAGGTGGA
GGGGTTAATACAGCAATATATAGTGCTGCTGGAGAATCTTTACAACATGCTACTAAAAAA
TGTGCTGATGCACTGAGGCCAGGAACCTCTGTAGTTGTTCCACTTCCATCAACTTCTCCT
CTGCATCAACGGGAAGGTGTGACGCATGTCATACATGTGCTCGGGCCAAATATGAATCCA
ATGCGACCAGACTGTCTTAAGAATGACTATACCAGAGGGTCTAAGATTCTTCGTGAAGCA
TACACTTCACTTTTTGAGAATTTTGCATCTATTGTGCAGAGCTACATGGGAAAGCAGAAC
AATGAGTCTGGAGCAGAAAAGTCAGCGTCTGGAAGGATATCGCCCAATGACACAAAAATG
AAGCGAGAGGACAACCATGAATCTGAAAGGATGAAAAAACATAAGTTGTTTCAACCCATC
ATGACTGCAAAGCGACAGCATGAGTGTACAAAGGTTAATGCTCCAAATTGCCATGATAAT
GCCATGACTTCATCTGCTGCTCCTAGCCAAACTAGACAAGTAGACAACAAAAGGAATGAT
GTGGTTACCAGTAAGACTTGGGGATCCTGGGCTCAGTCTCTTTACGAACTTGCCATGAAC
CCAGAAAAATACAAGAACTCAGATTCTATTCTAGAGACATCAGATGAATATGTTGTTCTG
AAAGATCTCTATCCAAAGGCCAAAAGGCATGTTTTGGTGATAGCTAGAATGGATGGTCTT
GACTCTCTAGCAGATGTCAAGAAAGAACACTTGCCTTTGTTGAGGAGGATGCATTCAGCT
GGGGTGAAGTGGGCACATAAGTTCCTAGAGGAAGATGCGGCTTTGGAATTCAGACTTGGA
TACCATTCGGTTCCATCAATGCGACAATTGCATCTTCACATCATTAGCCAGGATTTCAAC
TCTGCAAGCTTGAAAAATAAGAAACATTGGAACTCCTTCACCACATCATTTTTCCGTGAT
TCTGTTGATGTGATTGAGGAGATTGAACAAAATGGATCAACAACCACCAGCAGTGATGAA
AAGGTACTCGCTATGGAACTCCGGTGCCACAGGTGCAGGAGCGCTCATCCAAACATCCCG
AAACTGAAATCCCACATCGCCATCTGTAAATCTCCCTTCCCTTCACATCTTCTTCAGAAA
AACAGGCTGTTGTTGTCCTCGACGATGCATATGGACCGCACGTAG

Peptide Sequence

PEP ID

Zm00001d028757_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:1:45719786:45723263:1 gene:Zm00001d028757 transcript:Zm00001d028757_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor bHLH140
Sequence

MVVLVGPPGSGKSTFADAVVGGSTAGRHWVRVCQDTIGNGKAGTKIQCLKAASDALKEGK
SVLVDRCNLEREQRADFVKLGGTLRADVHAVSLDLPAKVCISRAVSRKGHEGNLQGGKAA
LVVNRMLQKKETPLLTEGFSRIMCCNDDGDIKKAVDLYNGLGPSDSLPSGVFGQKSKRPV
QVGIMKFLKKTDASVVETSSGPKQALTEIKPAQQNPLPKQENVEAGFACSMEVEKGLNDK
MENEEHAKGSDYCDVGSRTLAFPSISTADFQFDLDRASDIIVDTAANFLQKFDNIRLVLV
DLSEKSRILSLVKQKAAKKSIDSNRFFTYVGDITQLHTKGGLQCSVIGNAANWRLKPGGG
GVNTAIYSAAGESLQHATKKCADALRPGTSVVVPLPSTSPLHQREGVTHVIHVLGPNMNP
MRPDCLKNDYTRGSKILREAYTSLFENFASIVQSYMGKQNNESGAEKSASGRISPNDTKM
KREDNHESERMKKHKLFQPIMTAKRQHECTKVNAPNCHDNAMTSSAAPSQTRQVDNKRND
VVTSKTWGSWAQSLYELAMNPEKYKNSDSILETSDEYVVLKDLYPKAKRHVLVIARMDGL
DSLADVKKEHLPLLRRMHSAGVKWAHKFLEEDAALEFRLGYHSVPSMRQLHLHIISQDFN
SASLKNKKHWNSFTTSFFRDSVDVIEEIEQNGSTTTSSDEKVLAMELRCHRCRSAHPNIP
KLKSHIAICKSPFPSHLLQKNRLLLSSTMHMDRT

Transcript Sequence

Transcript ID

Zm00001d028757_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:45719786:45723263:1 gene:Zm00001d028757 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor bHLH140
Sequence

GAGACAAATATTTTTTTTCCGTTTCCTTCGCCTAATCGAACAGCTCCCGCCGTCGCCGCT
TAAACCCTAGCGCGTGCTGTCTCGAACCGTCGGTGCAGGTGCAGGTGCAGGCGCGGGCGC
GGAGACGAAGGGGGATGAGCGCGGCCGCAAGCAGGTGATGGTGGTACTGGTGGGCCCACC
GGGCAGCGGCAAGTCCACGTTTGCAGATGCCGTGGTTGGCGGCTCCACCGCCGGCCGCCA
CTGGGTTCGCGTCTGCCAGGATACAATAGGGAACGGCAAAGCTGGGACAAAAATACAGTG
CTTGAAGGCTGCATCAGATGCTTTGAAGGAGGGCAAGAGTGTTCTTGTCGACCGCTGCAA
CTTGGAACGTGAGCAGCGTGCTGATTTTGTGAAGCTGGGAGGCACATTGCGCGCAGATGT
GCACGCTGTCTCCCTGGATCTACCTGCAAAGGTCTGTATCTCACGTGCAGTGAGCCGAAA
GGGCCATGAAGGAAATCTGCAGGGTGGGAAGGCTGCCCTTGTTGTGAACCGCATGCTGCA
GAAGAAGGAGACACCCTTGCTCACAGAAGGTTTCAGTCGGATCATGTGCTGTAATGATGA
TGGCGACATTAAAAAAGCAGTTGACTTGTATAATGGTTTAGGGCCTTCAGATAGTCTTCC
ATCAGGAGTTTTTGGTCAGAAGAGCAAAAGACCCGTACAAGTTGGTATAATGAAGTTTCT
AAAGAAAACTGATGCTTCTGTTGTTGAGACATCTAGCGGACCTAAGCAGGCATTGACAGA
AATAAAGCCAGCGCAGCAAAATCCTTTGCCAAAACAGGAAAATGTTGAAGCTGGTTTTGC
CTGTTCCATGGAAGTTGAGAAGGGATTAAATGACAAGATGGAAAATGAAGAGCATGCTAA
AGGAAGTGATTATTGTGATGTTGGTTCCCGTACTCTGGCATTTCCATCTATTTCTACAGC
TGACTTCCAATTTGATCTTGACAGAGCATCTGATATTATAGTGGACACAGCTGCTAATTT
CTTGCAGAAGTTTGATAATATAAGACTAGTTCTTGTAGACCTGAGTGAGAAATCAAGAAT
TTTGTCATTGGTCAAACAGAAGGCTGCTAAGAAGAGCATCGACTCCAACAGATTTTTCAC
ATACGTGGGAGATATCACTCAGTTGCACACAAAAGGAGGTCTTCAGTGCAGCGTGATTGG
TAATGCTGCCAATTGGAGGCTAAAACCTGGAGGTGGAGGGGTTAATACAGCAATATATAG
TGCTGCTGGAGAATCTTTACAACATGCTACTAAAAAATGTGCTGATGCACTGAGGCCAGG
AACCTCTGTAGTTGTTCCACTTCCATCAACTTCTCCTCTGCATCAACGGGAAGGTGTGAC
GCATGTCATACATGTGCTCGGGCCAAATATGAATCCAATGCGACCAGACTGTCTTAAGAA
TGACTATACCAGAGGGTCTAAGATTCTTCGTGAAGCATACACTTCACTTTTTGAGAATTT
TGCATCTATTGTGCAGAGCTACATGGGAAAGCAGAACAATGAGTCTGGAGCAGAAAAGTC
AGCGTCTGGAAGGATATCGCCCAATGACACAAAAATGAAGCGAGAGGACAACCATGAATC
TGAAAGGATGAAAAAACATAAGTTGTTTCAACCCATCATGACTGCAAAGCGACAGCATGA
GTGTACAAAGGTTAATGCTCCAAATTGCCATGATAATGCCATGACTTCATCTGCTGCTCC
TAGCCAAACTAGACAAGTAGACAACAAAAGGAATGATGTGGTTACCAGTAAGACTTGGGG
ATCCTGGGCTCAGTCTCTTTACGAACTTGCCATGAACCCAGAAAAATACAAGAACTCAGA
TTCTATTCTAGAGACATCAGATGAATATGTTGTTCTGAAAGATCTCTATCCAAAGGCCAA
AAGGCATGTTTTGGTGATAGCTAGAATGGATGGTCTTGACTCTCTAGCAGATGTCAAGAA
AGAACACTTGCCTTTGTTGAGGAGGATGCATTCAGCTGGGGTGAAGTGGGCACATAAGTT
CCTAGAGGAAGATGCGGCTTTGGAATTCAGACTTGGATACCATTCGGTTCCATCAATGCG
ACAATTGCATCTTCACATCATTAGCCAGGATTTCAACTCTGCAAGCTTGAAAAATAAGAA
ACATTGGAACTCCTTCACCACATCATTTTTCCGTGATTCTGTTGATGTGATTGAGGAGAT
TGAACAAAATGGATCAACAACCACCAGCAGTGATGAAAAGGTACTCGCTATGGAACTCCG
GTGCCACAGGTGCAGGAGCGCTCATCCAAACATCCCGAAACTGAAATCCCACATCGCCAT
CTGTAAATCTCCCTTCCCTTCACATCTTCTTCAGAAAAACAGGCTGTTGTTGTCCTCGAC
GATGCATATGGACCGCACGTAGATGCTAGAACTCGATGATCAGTTGTCCTTGCACGCACA
TTTTGCATGTCGTGCTTGCCTAAGGATAGTGTTGATCGATTTTTTTTTTACCTAATGCGG
ACTAGTGGAAACTTGCCTTG