Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028735_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:44718501:44719536:1 gene:Zm00001d028735 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:isopropylmalate dehydrogenase1 description: isopropylmalate dehydrogenase1
Sequence

ATGGCATCGGCCGTGGCGCCGTTCTCAACGGAGTCCGGGGAGACCATTCGTGCCACGCTC
TTTCCCCGCGATGGCATCGGGCCAGAGATCGCCGAGTCTGTGAAGCAGGTATTCAATGTT
GCAGGGGTACCAATTGAATGGGAAGAACACTATGTCGGTACAGAAGTTGATCCCAGGACA
GAGAGTTTTTTGACTTGGGAAAGCCTGGAGTCAGTGCGTAGAAACAAAGTTGGCTTGAAA
GGACCTATGGCTACACCTATTGGAAAGGGCCATCGATCTTTGAATCTTACATTAAGGAAA
GAACTTGGGCTCTATGCCAATGTTGTGAGAGGTGTTGTGGAAAGTTTGGAAATTATTACA
CGCCAAGCAAGTTTGAGAGTGGCAGAGTATGCTTTCCATTATGCCAAGGCAAATGGCCGG
GAAAGAGTCTCTGCGATCCACAAAGCCAATATTATGAGGAAGACAGATGGTCTTTTCCTC
AAGTGTTGCCGCGAAGTGGCTGAAAAGTACCCTGAAATTCAATACGAGGAGGTCATCATT
GACAATTGCTGTATGACGCTTGTGAAGAATCCTGGTGGCATTTGTCTGGCTGAAGCTGTT
CATGGTTCTGCTCCTGATATTGCTGGCAAGAACCTTGCGAACCCGACTGCTCTTATGCTG
AGTGCTGTCATGTTGTTGCGCCACATGCAATTCAACGACAAAGCAGACCGGATCCACAAC
GCCATCCTCCAGACCATCGCCGAGGGCAAGTACAGGACTGCTGATCTTGGTGGAAAGGCA
TCGACATCAGAGTTTACAAACGCAGTCTGTGATCACATCTGA

Peptide Sequence

PEP ID

Zm00001d028735_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:44718501:44719536:1 gene:Zm00001d028735 transcript:Zm00001d028735_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:isopropylmalate dehydrogenase1 description: isopropylmalate dehydrogenase1
Sequence

MASAVAPFSTESGETIRATLFPRDGIGPEIAESVKQVFNVAGVPIEWEEHYVGTEVDPRT
ESFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELGLYANVVRGVVESLEIIT
RQASLRVAEYAFHYAKANGRERVSAIHKANIMRKTDGLFLKCCREVAEKYPEIQYEEVII
DNCCMTLVKNPGGICLAEAVHGSAPDIAGKNLANPTALMLSAVMLLRHMQFNDKADRIHN
AILQTIAEGKYRTADLGGKASTSEFTNAVCDHI

Transcript Sequence

Transcript ID

Zm00001d028735_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:44718501:44719536:1 gene:Zm00001d028735 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:isopropylmalate dehydrogenase1 description: isopropylmalate dehydrogenase1
Sequence

ATGGCATCGGCCGTGGCGCCGTTCTCAACGGAGTCCGGGGAGACCATTCGTGCCACGCTC
TTTCCCCGCGATGGCATCGGGCCAGAGATCGCCGAGTCTGTGAAGCAGGTATTCAATGTT
GCAGGGGTACCAATTGAATGGGAAGAACACTATGTCGGTACAGAAGTTGATCCCAGGACA
GAGAGTTTTTTGACTTGGGAAAGCCTGGAGTCAGTGCGTAGAAACAAAGTTGGCTTGAAA
GGACCTATGGCTACACCTATTGGAAAGGGCCATCGATCTTTGAATCTTACATTAAGGAAA
GAACTTGGGCTCTATGCCAATGTTGTGAGAGGTGTTGTGGAAAGTTTGGAAATTATTACA
CGCCAAGCAAGTTTGAGAGTGGCAGAGTATGCTTTCCATTATGCCAAGGCAAATGGCCGG
GAAAGAGTCTCTGCGATCCACAAAGCCAATATTATGAGGAAGACAGATGGTCTTTTCCTC
AAGTGTTGCCGCGAAGTGGCTGAAAAGTACCCTGAAATTCAATACGAGGAGGTCATCATT
GACAATTGCTGTATGACGCTTGTGAAGAATCCTGGTGGCATTTGTCTGGCTGAAGCTGTT
CATGGTTCTGCTCCTGATATTGCTGGCAAGAACCTTGCGAACCCGACTGCTCTTATGCTG
AGTGCTGTCATGTTGTTGCGCCACATGCAATTCAACGACAAAGCAGACCGGATCCACAAC
GCCATCCTCCAGACCATCGCCGAGGGCAAGTACAGGACTGCTGATCTTGGTGGAAAGGCA
TCGACATCAGAGTTTACAAACGCAGTCTGTGATCACATCTGA