Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028733_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:1:44554571:44560803:1 gene:Zm00001d028733 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNF1-related protein kinase catalytic subunit alpha KIN10
Sequence	ATGGATGGAAGTAGTAAAGGGAGTGGGCATTCTGAAGCATTAAGGAACTACAACCTGGGA AGAACTTTAGGTATCGGTACATTTGGAAAAGTGAAGATTGCAGAGCATAAGCTTACTGGA CATAGGGTTGCTATAAAGATCATCAACTGCCGCCAAATGAGAAATATGGAAATGGAAGAG AAAGCAAAGAGAGAATTCAAGATATTGAAGTTGTTCATTCACCCCCATATCATTCGGCTT TATGAGGTCATATACACACCTACAGATATATATGTTGTGATGGAATATTGTAAGTATGGC GAGTTATTTGATTACATTGTTGAGAAAGGCAGATTACAGGAAGATGAAGCTCGTCGAATC TTCCAGCAGATCATATCTGGCGTCGAATACTGCCATAGAAACATGGTTGTCCACCGTGAC CTAAAGCCGGAAAACTTGTTACTTGATTCAAAGTATAATGTAAAACTTGCGGATTTTGGT CTGAGCAATGTCATGCATGATGGCCATTTTCTGAAGACTAGCTGTGGGAGTCCGAACTAT GCTGCTCCAGAGGTAATATCTGGTAAACTATATGCTGGACCTGAGGTCGATGTATGGAGT TGTGGGGTGATTCTTTATGCTCTTCTTTGTGGAACTCTTCCATTTGATGATGAGAATATT CCCAATCTGTTCAAAAAAATTAAGGGAGGTATCTACACACTTCCAAGTCATTTGTCTGCT TTGGCCAGGGATTTGATCCCACGAATGCTTGTTGTTGAGCCTATGAAGAGAATCACAATT AGGGAAATTCGGGAGCATCAATGGTTCCAGATTCGCCTTCCACGTTACTTGGCAGTGCCT CCACCAGATACGACACAACAAGCCAAAATGATTGATGAAGATACACTTCGAGATGTTGTT AATATGGGATTTAACAAGAACCATGTGTGTGAATCACTGTGCAGCAGACTTCAAAATGAG GCAACTGTTGCATATTATTTACTATTGGACAATCGGTTTAGAGCAACTAGTGGCTATCTT GGGGCAGATTATCAAGAATCAATGGACAGGAATTTAAATCAGCTGGCGTCATCTGAATCA TCTAGTTCTGGTACGAGGAATTATGTTCCAGGAAGCAGTGATCCTCATAGCAGTGGTTTG CGGCCATATTATCCTGTTGAAAGAAAATGGGCGCTTGGACTTCAGTCTCGGGCCCACCCT CGTGAAATAATGGTTGAGGTCTTAAAAGCACTTCAAGAATTAAACGTCAGATGGAAGAAG AATGGGCACTACAACGTGAAATGCAGATGGTGCCCAGGGTTTCCTGAAGTTAATGACACG TTAGATGCCAGCAACAGCTTTCTTGGTGACTCTACCATCATGGATAATGATGATGCTAAT GGGAGGCTACCTACTGTGATCAAGTTTGAATTCCAGCTTTACAAGACGAAGGACGACAAG TACCTCTTAGATATGCAGAGAGTTACTGGACCTCAGCTGCTCTTCCTTGACTTCTGTGCG GCCTTCCTTACCAAGCTTAGGGTTCTATAG

Peptide Sequence

PEP ID	Zm00001d028733_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:1:44554571:44560803:1 gene:Zm00001d028733 transcript:Zm00001d028733_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNF1-related protein kinase catalytic subunit alpha KIN10
Sequence	MDGSSKGSGHSEALRNYNLGRTLGIGTFGKVKIAEHKLTGHRVAIKIINCRQMRNMEMEE KAKREFKILKLFIHPHIIRLYEVIYTPTDIYVVMEYCKYGELFDYIVEKGRLQEDEARRI FQQIISGVEYCHRNMVVHRDLKPENLLLDSKYNVKLADFGLSNVMHDGHFLKTSCGSPNY AAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSA LARDLIPRMLVVEPMKRITIREIREHQWFQIRLPRYLAVPPPDTTQQAKMIDEDTLRDVV NMGFNKNHVCESLCSRLQNEATVAYYLLLDNRFRATSGYLGADYQESMDRNLNQLASSES SSSGTRNYVPGSSDPHSSGLRPYYPVERKWALGLQSRAHPREIMVEVLKALQELNVRWKK NGHYNVKCRWCPGFPEVNDTLDASNSFLGDSTIMDNDDANGRLPTVIKFEFQLYKTKDDK YLLDMQRVTGPQLLFLDFCAAFLTKLRVL

Transcript Sequence

Transcript ID	Zm00001d028733_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:44554571:44560803:1 gene:Zm00001d028733 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNF1-related protein kinase catalytic subunit alpha KIN10
Sequence	GATTTCCTCCTGGTTCGCACGGCTCTCCTGCTTCGATTCTTCGGATTCGGAACTGGGGGA ATAATTGTCGGGGGATTCGGGGGTTGGTTTTGAGTTGCGGATCAAGGTGGGCTCGCTGTC GCATTTCCTTGGGGAGGGCGAGGATATTGACGGACGGTTAGAGCGAGGCGGTGTTCGTCT CCACGGACGCAACACCAGCCCACCAGAGTGAAAATGGATGGAAGTAGTAAAGGGAGTGGG CATTCTGAAGCATTAAGGAACTACAACCTGGGAAGAACTTTAGGTATCGGTACATTTGGA AAAGTGAAGATTGCAGAGCATAAGCTTACTGGACATAGGGTTGCTATAAAGATCATCAAC TGCCGCCAAATGAGAAATATGGAAATGGAAGAGAAAGCAAAGAGAGAATTCAAGATATTG AAGTTGTTCATTCACCCCCATATCATTCGGCTTTATGAGGTCATATACACACCTACAGAT ATATATGTTGTGATGGAATATTGTAAGTATGGCGAGTTATTTGATTACATTGTTGAGAAA GGCAGATTACAGGAAGATGAAGCTCGTCGAATCTTCCAGCAGATCATATCTGGCGTCGAA TACTGCCATAGAAACATGGTTGTCCACCGTGACCTAAAGCCGGAAAACTTGTTACTTGAT TCAAAGTATAATGTAAAACTTGCGGATTTTGGTCTGAGCAATGTCATGCATGATGGCCAT TTTCTGAAGACTAGCTGTGGGAGTCCGAACTATGCTGCTCCAGAGGTAATATCTGGTAAA CTATATGCTGGACCTGAGGTCGATGTATGGAGTTGTGGGGTGATTCTTTATGCTCTTCTT TGTGGAACTCTTCCATTTGATGATGAGAATATTCCCAATCTGTTCAAAAAAATTAAGGGA GGTATCTACACACTTCCAAGTCATTTGTCTGCTTTGGCCAGGGATTTGATCCCACGAATG CTTGTTGTTGAGCCTATGAAGAGAATCACAATTAGGGAAATTCGGGAGCATCAATGGTTC CAGATTCGCCTTCCACGTTACTTGGCAGTGCCTCCACCAGATACGACACAACAAGCCAAA ATGATTGATGAAGATACACTTCGAGATGTTGTTAATATGGGATTTAACAAGAACCATGTG TGTGAATCACTGTGCAGCAGACTTCAAAATGAGGCAACTGTTGCATATTATTTACTATTG GACAATCGGTTTAGAGCAACTAGTGGCTATCTTGGGGCAGATTATCAAGAATCAATGGAC AGGAATTTAAATCAGCTGGCGTCATCTGAATCATCTAGTTCTGGTACGAGGAATTATGTT CCAGGAAGCAGTGATCCTCATAGCAGTGGTTTGCGGCCATATTATCCTGTTGAAAGAAAA TGGGCGCTTGGACTTCAGTCTCGGGCCCACCCTCGTGAAATAATGGTTGAGGTCTTAAAA GCACTTCAAGAATTAAACGTCAGATGGAAGAAGAATGGGCACTACAACGTGAAATGCAGA TGGTGCCCAGGGTTTCCTGAAGTTAATGACACGTTAGATGCCAGCAACAGCTTTCTTGGT GACTCTACCATCATGGATAATGATGATGCTAATGGGAGGCTACCTACTGTGATCAAGTTT GAATTCCAGCTTTACAAGACGAAGGACGACAAGTACCTCTTAGATATGCAGAGAGTTACT GGACCTCAGCTGCTCTTCCTTGACTTCTGTGCGGCCTTCCTTACCAAGCTTAGGGTTCTA TAGTGGTCTACCATGTGCAAATTTTCACTGTGGTGATGAATAACCGAAAGCATGTAAATA GGAACCTTGTTCTCGTCTTTTGGACAACGAACATGTTTGAGTGACTGGTCTTGTGTTGAG CGCGTAAAGGTCATGTATACTTAGGTTAGTACTATTTTCGTTCTTAAATATTTGTCGTCT GCTAGTGATAGTTCATTTTTGAACTAAAACGTTACGAATAAAAAAAGAGTATATTACTGT CTGCATGGACATGGCTGTTTCAGTAGGCCGTGGCACCGCAGATGGCGATGCTCACTGCAA CCTATTATGAAAAAAAATGCAAGATTCAACTTTTGTTC