Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028728_T010
CDS Infomation	cds chromosome:B73_RefGen_v4:1:44521242:44531849:1 gene:Zm00001d028728 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA pseudouridine synthase 5
Sequence	ATGGGCGACGGGGCTCCGCCGCCAGGGGCTCTATACTCCTTCGGAACGCCGTGGCCGGAG CTCAATCAAGGCCTCACCTACACCGACACGTTCCGTTGCGCTGATGCGGACGCCGCTACC ACCTTGATTGAGTTCTACTCTACTAACCACAAGAGCTCGGCGCCATTGCCAGGGTGGATC AAGAGGATTCGTAATGGGCAGATAACCGTTGATGGTGAAGTTGTCACTGATCCAGATATG ACTCTGGTGGATGGGTCTAAGTTGGTATATCATCGTTTTCCTTGGCAGGAGCCATTTGCG CCGTATTTGCTGGAAGTGCTCTACGAGGATGATGACATGGTTGCCCTTAATAAGCCTTCT GGCTTGCAAGTTCTGCCTAAAGGACTGTTTCAGCAGCGAACTGTTTTAGCACAGCTTCAA TTGAAAGACTGGAAGATGGCCTCATCTTGCCGGTTCAAGAGAAAAGATGTGCAGTCACAT CCAGTACCTGTTCATCGTTTAGGGAGGGGAACATCAGGCCTCCTGCTTTGTGCCAAGACA AAAGTTGCCAAAGTTCGACTTGCATCTTATTTTGCTGAAGGTGCTATAAATGCTGCAAAG AAAAGGGATAAATCAGAGTTCAGTGAAGAGCGAAAAATTTCAAAATTTTATCGAGCCTTA GTGACTGGCATACTTGATGATGATGAGGTTGTTGTTACGCAACCTATAGGGTTAGTTCAT TATCCTGGAGTTGCAGAGGGACTTTATGCAGCATGTTCCTCAGGAAAGCCAGCAATGAGC AAAGTATGTGTTCTTGAGAGACTTGCACACCAAAATCACACACTGGTCCAGGTTGAAATT CATTCAGGACGACCTCACCAAATAAGGATACACCTTGCATACATTGGGCACCCACTTGTA GATGACCCTCTCTATGGTATTGGTGGGCACCCCAATTTTGTTGAGCCAGAATCTACTGGC ACAGATAGTTCTTTTGCATCTGATGGGGGTTATGAGAGACCTTTGCAACCTGTTCCTGGA GACTGTGGGTATCACCTGCATGCACATTGGCTGGTTCTTTGCCACCCAACAACCAATAAG GACGAAAGACTTCTGACGCCCCTGAGCTTGAGTTTCCGTTGGAGCGGATTTCAGGCTTGA

Peptide Sequence

PEP ID	Zm00001d028728_P010
PEP Infomation	pep chromosome:B73_RefGen_v4:1:44521242:44531849:1 gene:Zm00001d028728 transcript:Zm00001d028728_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA pseudouridine synthase 5
Sequence	MGDGAPPPGALYSFGTPWPELNQGLTYTDTFRCADADAATTLIEFYSTNHKSSAPLPGWI KRIRNGQITVDGEVVTDPDMTLVDGSKLVYHRFPWQEPFAPYLLEVLYEDDDMVALNKPS GLQVLPKGLFQQRTVLAQLQLKDWKMASSCRFKRKDVQSHPVPVHRLGRGTSGLLLCAKT KVAKVRLASYFAEGAINAAKKRDKSEFSEERKISKFYRALVTGILDDDEVVVTQPIGLVH YPGVAEGLYAACSSGKPAMSKVCVLERLAHQNHTLVQVEIHSGRPHQIRIHLAYIGHPLV DDPLYGIGGHPNFVEPESTGTDSSFASDGGYERPLQPVPGDCGYHLHAHWLVLCHPTTNK DERLLTPLSLSFRWSGFQA

Transcript Sequence

Transcript ID	Zm00001d028728_T010
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:44521242:44531849:1 gene:Zm00001d028728 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA pseudouridine synthase 5
Sequence	AGAAACACAGATGGGCGACGGGGCTCCGCCGCCAGGGGCTCTATACTCCTTCGGAACGCC GTGGCCGGAGCTCAATCAAGGCCTCACCTACACCGACACGTTCCGTTGCGCTGATGCGGA CGCCGCTACCACCTTGATTGAGTTCTACTCTACTAACCACAAGAGCTCGGCGCCATTGCC AGGGTGGATCAAGAGGATTCGTAATGGGCAGATAACCGTTGATGGTGAAGTTGTCACTGA TCCAGATATGACTCTGGTGGATGGGTCTAAGTTGGTATATCATCGTTTTCCTTGGCAGGA GCCATTTGCGCCGTATTTGCTGGAAGTGCTCTACGAGGATGATGACATGGTTGCCCTTAA TAAGCCTTCTGGCTTGCAAGTTCTGCCTAAAGGACTGTTTCAGCAGCGAACTGTTTTAGC ACAGCTTCAATTGAAAGACTGGAAGATGGCCTCATCTTGCCGGTTCAAGAGAAAAGATGT GCAGTCACATCCAGTACCTGTTCATCGTTTAGGGAGGGGAACATCAGGCCTCCTGCTTTG TGCCAAGACAAAAGTTGCCAAAGTTCGACTTGCATCTTATTTTGCTGAAGGTGCTATAAA TGCTGCAAAGAAAAGGGATAAATCAGAGTTCAGTGAAGAGCGAAAAATTTCAAAATTTTA TCGAGCCTTAGTGACTGGCATACTTGATGATGATGAGGTTGTTGTTACGCAACCTATAGG GTTAGTTCATTATCCTGGAGTTGCAGAGGGACTTTATGCAGCATGTTCCTCAGGAAAGCC AGCAATGAGCAAAGTATGTGTTCTTGAGAGACTTGCACACCAAAATCACACACTGGTCCA GGTTGAAATTCATTCAGGACGACCTCACCAAATAAGGATACACCTTGCATACATTGGGCA CCCACTTGTAGATGACCCTCTCTATGGTATTGGTGGGCACCCCAATTTTGTTGAGCCAGA ATCTACTGGCACAGATAGTTCTTTTGCATCTGATGGGGGTTATGAGAGACCTTTGCAACC TGTTCCTGGAGACTGTGGGTATCACCTGCATGCACATTGGCTGGTTCTTTGCCACCCAAC AACCAATAAGGACGAAAGACTTCTGACGCCCCTGAGCTTGAGTTTCCGTTGGAGCGGATT TCAGGCTTGATTTTTTTTTTAAAAAAAATTCCCATATTCGAGTTTCCCCTCTATGTATTG TAGGGAGGAAAAAGTAGGATTTTACTCTTGTTGTGAACTGCTTTTACTGCTGATCTGACA GAAGGCAGGAACCCCTAGAATTTAGACCAGAAAAATGAACTCTCATTAGTTTTTTTTATG TTTTTAATGGGCATTATTGTAACTACTGCTCCATTCCTTGTGTTGACTATGTGCTTACCA TGGCCG