Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028622_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:1:41158824:41162190:-1 gene:Zm00001d028622 gene_biotype:protein_coding transcript_biotype:protein_coding description:60S ribosomal protein L3-1
Sequence	ATGTCGCACCGTAAGTTCGAGCACCCGAGGCACGGCTCCCTCGGCTTCCTTCCCAGGAAG CGCTCCTCCCGTCACCGCGGCAAGGTGAAGTCATTCCCTAGGGATGACGCCAAGAAGCCT TGCCATCTCACTGCCTTCCTTGGCTACAAGGCTGGCATGACTCACATTGTCCGTGAGGTT GAGAAGCCAGGATCCAAACTCCATAAGAAGGAAACTTGTGAGGCTGTTACCATCATTGAA ACCCCTCCTCTTGTCATTGTTGGGCTCGTGGCATATGTGAAGACTCCTCGTGGCCTCCGC ACACTCAACTCTGTTTGGGCCCAACATCTTAGCGAAGAAGTGAGGAGAAGGTTCTACAAG AACTGGTGCAAGAGCAAGAAGAAGGCTTTCACAAAGTATGCTCTCAAATATGAAAATGAT GCTGGCAAGAAGGAAATTCAGCTGCAGCTTGAGAAGATGAAGAAATATGCTTCTGTTATC CGTGTCATTGCTCATACCCAGATTAGGAAGATGAAGGGTTTGAAGCAGAAGAAGGCTCAC CTGATGGAGATTCAGGTCAATGGTGGTACCATTGCTGACAAGGTGGACTATGGCTACAAA TTCTTTGAGAAAGAGGTCCCTGTTGATGCTGTCTTCCAGAAGGATGAGATGATTGACATC ATTGGTGTGACCAAGGGGAAAGGTTATGAGGGTGTGGTCACTCGTTGGGGTGTCACCCGG CTTCCCCGCAAGACCCACAGGGGTCTCCGCAAAGTTGCTTGTATCGGTGCATGGCATCCG GCTAGGGTCTCCTATACGGTTGCTCGTGCTGGTCAGAATGGGTACCACCACCGCACTGAG ATGAACAAGAAGGTTTACAAGATCGGCAAGGCTGGACAAGAGACCCACGATGCCTCCACA GAGTTTGACAGGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCCCATTATGGTATC GTGAAGGGTGACTACCTGATGATCAAGGGCTGCTGTGTGGGTCCAAAGAAGAGGGTGGTG ACCCTCCGCCAGTCCCTCCTGAAGCAGACTTCCCGGCTGGCGCTGGAGGAGATCAAGCTC AAGTTCATCGACACATCGTCCAAATTTGGGCACGGTCGCTTCCAGACTACCGATGAGAAG CAGAGGTTCTTTGGCAAGCTCAAGGCGTAA

Peptide Sequence

PEP ID	Zm00001d028622_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:1:41158824:41162190:-1 gene:Zm00001d028622 transcript:Zm00001d028622_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:60S ribosomal protein L3-1
Sequence	MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDAKKPCHLTAFLGYKAGMTHIVREV EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH LMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDAST EFDRTEKDITPMGGFPHYGIVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL KFIDTSSKFGHGRFQTTDEKQRFFGKLKA

Transcript Sequence

Transcript ID	Zm00001d028622_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:41158824:41162190:-1 gene:Zm00001d028622 gene_biotype:protein_coding transcript_biotype:protein_coding description:60S ribosomal protein L3-1
Sequence	AGCCCATATTTCACACAGGGCATTTCGGTTCGGGGCATTTCGGTCCGGCGGGATCGAAAC TCTCGCACCCGAGAGCCCTTTATATCCGCTAGGGTTTACGCGCATTTTTGCTCCTCACTG CCGCGCCGCCACCCTCTACAGATAAGGAAGAGGAGGAGGGCAGGATGTCGCACCGTAAGT TCGAGCACCCGAGGCACGGCTCCCTCGGCTTCCTTCCCAGGAAGCGCTCCTCCCGTCACC GCGGCAAGGTGAAGTCATTCCCTAGGGATGACGCCAAGAAGCCTTGCCATCTCACTGCCT TCCTTGGCTACAAGGCTGGCATGACTCACATTGTCCGTGAGGTTGAGAAGCCAGGATCCA AACTCCATAAGAAGGAAACTTGTGAGGCTGTTACCATCATTGAAACCCCTCCTCTTGTCA TTGTTGGGCTCGTGGCATATGTGAAGACTCCTCGTGGCCTCCGCACACTCAACTCTGTTT GGGCCCAACATCTTAGCGAAGAAGTGAGGAGAAGGTTCTACAAGAACTGGTGCAAGAGCA AGAAGAAGGCTTTCACAAAGTATGCTCTCAAATATGAAAATGATGCTGGCAAGAAGGAAA TTCAGCTGCAGCTTGAGAAGATGAAGAAATATGCTTCTGTTATCCGTGTCATTGCTCATA CCCAGATTAGGAAGATGAAGGGTTTGAAGCAGAAGAAGGCTCACCTGATGGAGATTCAGG TCAATGGTGGTACCATTGCTGACAAGGTGGACTATGGCTACAAATTCTTTGAGAAAGAGG TCCCTGTTGATGCTGTCTTCCAGAAGGATGAGATGATTGACATCATTGGTGTGACCAAGG GGAAAGGTTATGAGGGTGTGGTCACTCGTTGGGGTGTCACCCGGCTTCCCCGCAAGACCC ACAGGGGTCTCCGCAAAGTTGCTTGTATCGGTGCATGGCATCCGGCTAGGGTCTCCTATA CGGTTGCTCGTGCTGGTCAGAATGGGTACCACCACCGCACTGAGATGAACAAGAAGGTTT ACAAGATCGGCAAGGCTGGACAAGAGACCCACGATGCCTCCACAGAGTTTGACAGGACTG AGAAGGACATCACTCCCATGGGTGGCTTCCCCCATTATGGTATCGTGAAGGGTGACTACC TGATGATCAAGGGCTGCTGTGTGGGTCCAAAGAAGAGGGTGGTGACCCTCCGCCAGTCCC TCCTGAAGCAGACTTCCCGGCTGGCGCTGGAGGAGATCAAGCTCAAGTTCATCGACACAT CGTCCAAATTTGGGCACGGTCGCTTCCAGACTACCGATGAGAAGCAGAGGTTCTTTGGCA AGCTCAAGGCGTAAGGTGCTGCGGTGCAGCGAAGTCCCATTTCTCAAAATCATCAAACTG TGATACTTTTGTTTGTAACCTTGCTGTACCAAGTTTTGTAGCCATGGTCCAGTCGTCTAT GGATTGTTCCATGCTTCAGAACTGCACTGTCTATGTTTTGTGCTATTTTGGTTGTTTAAT GCCCCAATCATTGCATATAGATTCTAATTGTTTTGGTGTTTGATGATCAATATAACTATT TATACTAATTGTGTTT