Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028620_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:41086669:41088588:-1 gene:Zm00001d028620 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative clathrin assembly protein

Sequence

ATGTCGTCGAGCACGATCCGCAAGGCCCTGGGCGCGGTGAAGGACCAGACCAGCATCGGC
CTCGCCAAGGTCACCAGCAACATCGCGCCCGAGCTGGACGTGCTCATCGTCAAGGCCACG
AGCCACGACGACGAGCCGGCCGAGGAGCGCCACATCCGCGAGATCCTCCACCTCACATCC
GGATCCCGCGCCCACGTCGCTGCTGCCGTGGCAGGCTGCTCCCGCAGGCTCTCCCGCACC
CGCGACTACGTGGTCGCGCTCAAGTCGCTCATGCTCGTGCACCGCCTCCTGGCCGATGGC
GACCCGTCCTTCCACCGCGAGCTCCTCCACGCCACACGCCGGGGCACCCGCCTGCTCAAC
CTCTCCGATTTTCGGGACGAGGCGCACTCTGGATCCTGGGATCACTCTGCCTTTGTGCGC
ACCTACGCGCTCTACCTTGACCAGCGCCTCGAGTTCTTCCTCCATGAGCGCAAGCAGGGG
TCAAATGCTGGCAGCAGCAGCAGCACCAATGGTCCATCACCGCGGGACCGTGACCGCTGG
GGTTCACCTGATCCCTATGGCCGCCGCTCTCCCTCCTACTCGTCACCCCCTGGGTATGGC
GGATATGATGATTACCGCGAGAGAAATGGTGGAAACAATGATGACAAGAGACCGCCCACC
CCAGTGAGAGATATGAAGCCAGAGCAGGTCCTTGCTCGTATGCACCACCTACAGCAGCTG
CTTGACAGGTTCCTTGCTTGCCGTCCCACCGGTGGGGCGAAGCACAGCAGGATGGTGCTG
GTTGCGCTGTATCAGATTGTGAGGGAGAGCTTCCAGCTCTACGCCGATATCTGCGAGGTG
CTGGCGGTGCTGCTGGACAGGTTCTTTGACATGGAGTATGCTGAATGCGTGAAGGCTTTT
GAGGCTTATGCTAGTGCTGCAAAGCAGATCGATGAGCTCTGTGCATTCTATGCATGGTGT
AAAGATACCGGAGTTGCAAGGTCATCTGAGTACCCAGAGGTGCAGCGGGTCACCGATAAG
TTGCTGGAGACGCTGGAAGAATTTATGAGGGACCGGGCAAAGAGGCCCAAGAGCCCATCA
CCGGAGCCTGAACCTGAGCCTGTCAAGGAAGAACCTGAGCCAGATATGAACAGCATCAAG
GCGCTTCCAGCACCAGAAGATTATAAGGAGCCTGAACCTGAGAAGGTGGAGGAAGAGGTG
AAGCCAGAGCCACCCCTGCAGCCACAGGGTGACTTGGTGGATCTCAGAGAAGATACTGTT
AGTGCAGATGAGCAAGGTAACAGGCTTGCTCTAGCTCTCTTCCAGGGGCCACCAGCTGCT
GGTGGAAGCAACGGTTCATGGGAGGCTTTCCCTTCAAATGGTGGCAACGAGGTGACTTCG
GCCTGGCAGAACCCTGCAGCTGAACCTGGGAAGGCTGATTGGGAGCTTGCCCTTGTAGAG
ACAGCAAGCAACTTGTCCAATCAGAAGCCAGCAATGTCAGGTGGCATGGACCCGCTGCTG
CTGAATGGTATGTATGACCAGGGTGTTGTGCGCCAGCATGTCGGTGCACAGGTGACCACC
GGGAGTGCCAGCAGTGTCGCGCTGCCTGCTCCTGGACAGAAGACTCAGATGCTTGCTCTG
CCCGCACCGGATGGTTCGATGCAGACTGTTGGTGGTGATCCCTTCGCGGCGTCCCTTGCC
GTGCCACCGCCGTCCTATGTGCAGATGGCAGATTTGGAGAAGAAGCAACAGCTCTTGACG
CAGGAGCAAATTATGTGGCAGCAGTACCAGAGAGACGGCATGCAAGGGCAATCGAGCCTG
AACAGGCTCGACCGCGCCCCCAACCCGGCCATGCCCTACGGGATGCCCATGGCATACAAC
ACGAACCCCATGCCAATGGCTTACACCGGGAACACTGGGTATTACTACCCTACTTACTGA

Peptide Sequence

PEP ID

Zm00001d028620_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:41086669:41088588:-1 gene:Zm00001d028620 transcript:Zm00001d028620_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative clathrin assembly protein

Sequence

MSSSTIRKALGAVKDQTSIGLAKVTSNIAPELDVLIVKATSHDDEPAEERHIREILHLTS
GSRAHVAAAVAGCSRRLSRTRDYVVALKSLMLVHRLLADGDPSFHRELLHATRRGTRLLN
LSDFRDEAHSGSWDHSAFVRTYALYLDQRLEFFLHERKQGSNAGSSSSTNGPSPRDRDRW
GSPDPYGRRSPSYSSPPGYGGYDDYRERNGGNNDDKRPPTPVRDMKPEQVLARMHHLQQL
LDRFLACRPTGGAKHSRMVLVALYQIVRESFQLYADICEVLAVLLDRFFDMEYAECVKAF
EAYASAAKQIDELCAFYAWCKDTGVARSSEYPEVQRVTDKLLETLEEFMRDRAKRPKSPS
PEPEPEPVKEEPEPDMNSIKALPAPEDYKEPEPEKVEEEVKPEPPLQPQGDLVDLREDTV
SADEQGNRLALALFQGPPAAGGSNGSWEAFPSNGGNEVTSAWQNPAAEPGKADWELALVE
TASNLSNQKPAMSGGMDPLLLNGMYDQGVVRQHVGAQVTTGSASSVALPAPGQKTQMLAL
PAPDGSMQTVGGDPFAASLAVPPPSYVQMADLEKKQQLLTQEQIMWQQYQRDGMQGQSSL
NRLDRAPNPAMPYGMPMAYNTNPMPMAYTGNTGYYYPTY

Transcript Sequence

Transcript ID

Zm00001d028620_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:41086669:41088588:-1 gene:Zm00001d028620 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative clathrin assembly protein

Sequence

ATGTCGTCGAGCACGATCCGCAAGGCCCTGGGCGCGGTGAAGGACCAGACCAGCATCGGC
CTCGCCAAGGTCACCAGCAACATCGCGCCCGAGCTGGACGTGCTCATCGTCAAGGCCACG
AGCCACGACGACGAGCCGGCCGAGGAGCGCCACATCCGCGAGATCCTCCACCTCACATCC
GGATCCCGCGCCCACGTCGCTGCTGCCGTGGCAGGCTGCTCCCGCAGGCTCTCCCGCACC
CGCGACTACGTGGTCGCGCTCAAGTCGCTCATGCTCGTGCACCGCCTCCTGGCCGATGGC
GACCCGTCCTTCCACCGCGAGCTCCTCCACGCCACACGCCGGGGCACCCGCCTGCTCAAC
CTCTCCGATTTTCGGGACGAGGCGCACTCTGGATCCTGGGATCACTCTGCCTTTGTGCGC
ACCTACGCGCTCTACCTTGACCAGCGCCTCGAGTTCTTCCTCCATGAGCGCAAGCAGGGG
TCAAATGCTGGCAGCAGCAGCAGCACCAATGGTCCATCACCGCGGGACCGTGACCGCTGG
GGTTCACCTGATCCCTATGGCCGCCGCTCTCCCTCCTACTCGTCACCCCCTGGGTATGGC
GGATATGATGATTACCGCGAGAGAAATGGTGGAAACAATGATGACAAGAGACCGCCCACC
CCAGTGAGAGATATGAAGCCAGAGCAGGTCCTTGCTCGTATGCACCACCTACAGCAGCTG
CTTGACAGGTTCCTTGCTTGCCGTCCCACCGGTGGGGCGAAGCACAGCAGGATGGTGCTG
GTTGCGCTGTATCAGATTGTGAGGGAGAGCTTCCAGCTCTACGCCGATATCTGCGAGGTG
CTGGCGGTGCTGCTGGACAGGTTCTTTGACATGGAGTATGCTGAATGCGTGAAGGCTTTT
GAGGCTTATGCTAGTGCTGCAAAGCAGATCGATGAGCTCTGTGCATTCTATGCATGGTGT
AAAGATACCGGAGTTGCAAGGTCATCTGAGTACCCAGAGGTGCAGCGGGTCACCGATAAG
TTGCTGGAGACGCTGGAAGAATTTATGAGGGACCGGGCAAAGAGGCCCAAGAGCCCATCA
CCGGAGCCTGAACCTGAGCCTGTCAAGGAAGAACCTGAGCCAGATATGAACAGCATCAAG
GCGCTTCCAGCACCAGAAGATTATAAGGAGCCTGAACCTGAGAAGGTGGAGGAAGAGGTG
AAGCCAGAGCCACCCCTGCAGCCACAGGGTGACTTGGTGGATCTCAGAGAAGATACTGTT
AGTGCAGATGAGCAAGGTAACAGGCTTGCTCTAGCTCTCTTCCAGGGGCCACCAGCTGCT
GGTGGAAGCAACGGTTCATGGGAGGCTTTCCCTTCAAATGGTGGCAACGAGGTGACTTCG
GCCTGGCAGAACCCTGCAGCTGAACCTGGGAAGGCTGATTGGGAGCTTGCCCTTGTAGAG
ACAGCAAGCAACTTGTCCAATCAGAAGCCAGCAATGTCAGGTGGCATGGACCCGCTGCTG
CTGAATGGTATGTATGACCAGGGTGTTGTGCGCCAGCATGTCGGTGCACAGGTGACCACC
GGGAGTGCCAGCAGTGTCGCGCTGCCTGCTCCTGGACAGAAGACTCAGATGCTTGCTCTG
CCCGCACCGGATGGTTCGATGCAGACTGTTGGTGGTGATCCCTTCGCGGCGTCCCTTGCC
GTGCCACCGCCGTCCTATGTGCAGATGGCAGATTTGGAGAAGAAGCAACAGCTCTTGACG
CAGGAGCAAATTATGTGGCAGCAGTACCAGAGAGACGGCATGCAAGGGCAATCGAGCCTG
AACAGGCTCGACCGCGCCCCCAACCCGGCCATGCCCTACGGGATGCCCATGGCATACAAC
ACGAACCCCATGCCAATGGCTTACACCGGGAACACTGGGTATTACTACCCTACTTACTGA