Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028615_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:40886065:40889048:1 gene:Zm00001d028615 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 4
Sequence

ATGGGCAATGGCATCACCAAGAACCCATGCTTCTCCGGTGACTCGTACGCCGCCGCCGTC
GCGTCTGACCCGCTCCCGGACGACAGCCATGGTCACTCCTTCACCTACGTGCCATCGGGC
GCCGCCTTCGACCAGCCCCAGACGTCTGCCGCGACGTCGTCGGAGTCGTCGTTCTTCTCT
CTGTCCGGCGCCGCCATCAGCGCCAATCCGGCGACGTCGGCGTCGATGCCGTCGTTCCGC
CTTTTTAACGAGCTGACGTGGCCGCCGTCGACCGCGTGCACCTTCGAGAGCTCGCGGTCC
TTCTCTGCCATTCCTCTCCAGGCGGCGCCGCCTAGACTTTCCATGTCCGGGCCGGTCCAG
TTCACGTCCGGCCGGTTCTCCGAGACATCCGGCTCCACGTCCACGATCTCCGGCACGCCC
TCAGACCGCCCATTCATGTCAGGGCCGCTCGACCACTCCTTGTCCATCTCCTCGTCGTCC
GCGGGGCTCCTCCATCCGAGCGTTTCTCAGCTCATCGCTGAGCGCCGCGCCGCGCGCTCC
CGACTCCGGGATGAGCGATCCCTGCTACGGTTCTTCGTCAGGACCGCCTCCAAACTCTGG
CTCGGGTCGCCGCGCTATGGCCGCCGGCCACAGGAACCTGCTGATCCGATAAAGTTCTCC
TTCAGCGATGGGGACTACCGCTCGCCGCCGAACAGCAATGTGGAGTGGGCTCAGGGCATG
GCCGGCGAGGACCGCTTCCACGTCGCGGTGTCCGAGGAGCACGGCTGGGTGTTCGTCGGA
ATTTACGACGGGTTCAACGGCCCCGACGCGACCGATTACCTCTTCGCCAACCTCTACGTC
GCCGTGCACAACGAGCTCAAAGGCTTGCTCTGGGACGGCATCCAAGCAGGCGACAGCGCC
AGGTGCGGTGAGCAAGAAGCGGGCGCAGGCAATGCCGAACGCCTCTGTATTGCTCAGGCC
GACGGGGACGGCGCGGAGGCTAAGCGCAGACGGACGGAAGTGCCCATGCCAGGCAACAGC
GCCACGCCAGTGCACCGCGACGTCCTGAGGGCGCTGGCGCGGGCACTGAAGAAGACGGAG
GAGGCGTTCTTCGCGGCGGCGGAGGAACGCGCGGCCGAGAGCCCGGAGCTGGGGCTGATG
GGGTCCTGCGTGCTGGTGATGGTGATGAAGGGCACGGACGTTTACGTGATGAACGTCGGG
GACAGCCGCGCCGTGCTGGCGCGGAGGCCGGAGCCCGACCTGAAGAACGTCCTCGGCAAG
GCGTCGCAGGACCTGCAGCAGTTCAAGGTGGAGATCATGCGCGAGCTGGAGGCGCACGAC
ATGGACGGCCTGCAGGCCGTGCAGCTCACCCCAGAGCACAGCACCGCGGTCCAGGAGGAG
GTGACGAGGATCAAAGGCCAGCATCTGAATGATCGGAACGCGATAGTCAATGGTCGGGTC
AAGGGGAAGATCAACGTCACCAGAGCGTTCGGGGTCGCCTACCTGAAGCAGCCCAAGTGG
AACAGCAGGCTTCTGGAAGCCTTCAAGATCAACTACGTCGGCACTGACCCGTACGTGACC
TGCGCGCCGTCGCTGTGCCACCACCGCATCGGCTCGCAGGACAAGTTCCTGGTGCTGTCC
TCCGACGGGCTCTACCAGTTCTTCACCAACAAGGAGGTGGTGGACCAGGTGGAGGCGTTC
ACCGCCGCGGAGCCCGACGGCGACCCCGCGCAGCACCTCGTCGGGGAGCTCGTCAACCGC
GCCGCGAGGAAGGCCGGCATGGAGACGCGCCAGCTGCTGGACATCCCGCGCGGCGCGAGG
AGGCACTACCACGACGACGTCTCCATCATCGTCATCTCGTTCGAGGGGCGGATCTGGAGG
TCGTCTGTCTAG

Peptide Sequence

PEP ID

Zm00001d028615_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:40886065:40889048:1 gene:Zm00001d028615 transcript:Zm00001d028615_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 4
Sequence

MGNGITKNPCFSGDSYAAAVASDPLPDDSHGHSFTYVPSGAAFDQPQTSAATSSESSFFS
LSGAAISANPATSASMPSFRLFNELTWPPSTACTFESSRSFSAIPLQAAPPRLSMSGPVQ
FTSGRFSETSGSTSTISGTPSDRPFMSGPLDHSLSISSSSAGLLHPSVSQLIAERRAARS
RLRDERSLLRFFVRTASKLWLGSPRYGRRPQEPADPIKFSFSDGDYRSPPNSNVEWAQGM
AGEDRFHVAVSEEHGWVFVGIYDGFNGPDATDYLFANLYVAVHNELKGLLWDGIQAGDSA
RCGEQEAGAGNAERLCIAQADGDGAEAKRRRTEVPMPGNSATPVHRDVLRALARALKKTE
EAFFAAAEERAAESPELGLMGSCVLVMVMKGTDVYVMNVGDSRAVLARRPEPDLKNVLGK
ASQDLQQFKVEIMRELEAHDMDGLQAVQLTPEHSTAVQEEVTRIKGQHLNDRNAIVNGRV
KGKINVTRAFGVAYLKQPKWNSRLLEAFKINYVGTDPYVTCAPSLCHHRIGSQDKFLVLS
SDGLYQFFTNKEVVDQVEAFTAAEPDGDPAQHLVGELVNRAARKAGMETRQLLDIPRGAR
RHYHDDVSIIVISFEGRIWRSSV

Transcript Sequence

Transcript ID

Zm00001d028615_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:40886065:40889048:1 gene:Zm00001d028615 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 4
Sequence

AAGGAAACAAAATGGGCAATGGCATCACCAAGAACCCATGCTTCTCCGGTGACTCGTACG
CCGCCGCCGTCGCGTCTGACCCGCTCCCGGACGACAGCCATGGTCACTCCTTCACCTACG
TGCCATCGGGCGCCGCCTTCGACCAGCCCCAGACGTCTGCCGCGACGTCGTCGGAGTCGT
CGTTCTTCTCTCTGTCCGGCGCCGCCATCAGCGCCAATCCGGCGACGTCGGCGTCGATGC
CGTCGTTCCGCCTTTTTAACGAGCTGACGTGGCCGCCGTCGACCGCGTGCACCTTCGAGA
GCTCGCGGTCCTTCTCTGCCATTCCTCTCCAGGCGGCGCCGCCTAGACTTTCCATGTCCG
GGCCGGTCCAGTTCACGTCCGGCCGGTTCTCCGAGACATCCGGCTCCACGTCCACGATCT
CCGGCACGCCCTCAGACCGCCCATTCATGTCAGGGCCGCTCGACCACTCCTTGTCCATCT
CCTCGTCGTCCGCGGGGCTCCTCCATCCGAGCGTTTCTCAGCTCATCGCTGAGCGCCGCG
CCGCGCGCTCCCGACTCCGGGATGAGCGATCCCTGCTACGGTTCTTCGTCAGGACCGCCT
CCAAACTCTGGCTCGGGTCGCCGCGCTATGGCCGCCGGCCACAGGAACCTGCTGATCCGA
TAAAGTTCTCCTTCAGCGATGGGGACTACCGCTCGCCGCCGAACAGCAATGTGGAGTGGG
CTCAGGGCATGGCCGGCGAGGACCGCTTCCACGTCGCGGTGTCCGAGGAGCACGGCTGGG
TGTTCGTCGGAATTTACGACGGGTTCAACGGCCCCGACGCGACCGATTACCTCTTCGCCA
ACCTCTACGTCGCCGTGCACAACGAGCTCAAAGGCTTGCTCTGGGACGGCATCCAAGCAG
GCGACAGCGCCAGGTGCGGTGAGCAAGAAGCGGGCGCAGGCAATGCCGAACGCCTCTGTA
TTGCTCAGGCCGACGGGGACGGCGCGGAGGCTAAGCGCAGACGGACGGAAGTGCCCATGC
CAGGCAACAGCGCCACGCCAGTGCACCGCGACGTCCTGAGGGCGCTGGCGCGGGCACTGA
AGAAGACGGAGGAGGCGTTCTTCGCGGCGGCGGAGGAACGCGCGGCCGAGAGCCCGGAGC
TGGGGCTGATGGGGTCCTGCGTGCTGGTGATGGTGATGAAGGGCACGGACGTTTACGTGA
TGAACGTCGGGGACAGCCGCGCCGTGCTGGCGCGGAGGCCGGAGCCCGACCTGAAGAACG
TCCTCGGCAAGGCGTCGCAGGACCTGCAGCAGTTCAAGGTGGAGATCATGCGCGAGCTGG
AGGCGCACGACATGGACGGCCTGCAGGCCGTGCAGCTCACCCCAGAGCACAGCACCGCGG
TCCAGGAGGAGGTGACGAGGATCAAAGGCCAGCATCTGAATGATCGGAACGCGATAGTCA
ATGGTCGGGTCAAGGGGAAGATCAACGTCACCAGAGCGTTCGGGGTCGCCTACCTGAAGC
AGCCCAAGTGGAACAGCAGGCTTCTGGAAGCCTTCAAGATCAACTACGTCGGCACTGACC
CGTACGTGACCTGCGCGCCGTCGCTGTGCCACCACCGCATCGGCTCGCAGGACAAGTTCC
TGGTGCTGTCCTCCGACGGGCTCTACCAGTTCTTCACCAACAAGGAGGTGGTGGACCAGG
TGGAGGCGTTCACCGCCGCGGAGCCCGACGGCGACCCCGCGCAGCACCTCGTCGGGGAGC
TCGTCAACCGCGCCGCGAGGAAGGCCGGCATGGAGACGCGCCAGCTGCTGGACATCCCGC
GCGGCGCGAGGAGGCACTACCACGACGACGTCTCCATCATCGTCATCTCGTTCGAGGGGC
GGATCTGGAGGTCGTCTGTCTAGGTGTGTCGTGTCTGAGTCTGACGTGGTTTTCAGAGGT
CCAAGGCGTCCTCGTAGGTCAGATGAGGAGGAGAGATGGAATGAGGAGGCGATGGTCGAC
AGTCTCAAGGGCGAGGGCACGGCGCTGCCATGAGCTGCCTTCAGTGTCCGGCTATCGTTT
TTGGTTTACCTTATACCATATACTAGAGCCATGTTCGTTCTTGCCGAAACTGTTGTACAT
AGTTCCGCAAGACGAACTCTAATAGCAAAGAAAAGAAGAAAAGAAAATGCAGTATTAGTA
TGTAATTAGGGGTTTCGCATCAAAAGAAGAAGTGGTTAGTATCTG